Nanorana parkeri (Xizang Plateau frog): 108788843 Help Entry 108788843         CDS       T04897                                  Symbol COL18A1 Name (RefSeq) collagen alpha-1(XVIII) chain   KO K06823   collagen type XVIII alpha Organism npr  Nanorana parkeri (Xizang Plateau frog) Brite KEGG Orthology (KO) [BR:npr00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:npr04147]     108788843 (COL18A1)    00535 Proteoglycans [BR:npr00535]     108788843 (COL18A1)    00536 Glycosaminoglycan binding proteins [BR:npr00536]     108788843 (COL18A1) Exosome [BR:npr04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    108788843 (COL18A1) Proteoglycans [BR:npr00535]  Extracellular matrix (ECM) proteoglycans   Basement membrane proteoglycans    108788843 (COL18A1) Glycosaminoglycan binding proteins [BR:npr00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108788843 (COL18A1) SSDB OrthologParalogGFIT Motif Pfam:  Endostatin Collagen Collagen_trimer DUF959 Motif Other DBs NCBI-GeneID:  108788843 NCBI-ProteinID:  XP_018414229 LinkDB All DBs Position Unknown AA seq 1572 aa AA seqDB search MAPTQLWPVLAILLLTLPALPHAQLFNWLGWGAKPTIPAEQLKTTIEPAVVATTAAPHSS DSLSPEGSSLPKARTIVGKETSSTVRDEKDITIATSPSSEPAATTSSSAAASSPSNQTSI PAASTTNSSTSTTQKQLAGTVTTAASLNDQLQIPESPATVKKPPENQIFNIFQIHEGGLN SGSDVQHATPTSNDVSTSLPEASTTQKTKDKNIAGVGAEILNVAENIRDFMNVWEEKDKD LLPSTDQPPAEQELGELINVTLHANQSGNLSQYGMGQDNSSNTTEKYTHSPLALSNNQTL NVTQVPSRNVTSAQPERVNVEVGLLQLIGDPPPEQITKIFGPDKTPGYVFGEDANTGQVA QYHLPSPMFRDFSILFHIQPTTKKAGMLFSITDASQSIVYVGVKLSEVKDGKQQIIFFYT EPGSAVSYPAATFTVPAMTNQWTRFALSVEEEEVTLFMECNELKRVRFERSPDEMELEDG SGLFVAQAGGADPDRYQGVIAELKVKSDPRAAELQCEEEGDDSDGASGDFGSGLPEEEEV EVTRPPAVLELVPITVPPIQRPSVWVTAKIIEALVTGKPGQKGEKGDRGERGEKGNIGQA GSKGDSGTSTSGGLASKGDKGQKGELGVKGGAGFGYPGPKGQKGELGLPGPPGPSGSSGP SVVQKADGTTVQQITGPQGPPGPQGPPGKEGEPGEVGPQGFPGTPGDPGQKGDKGDPGVG SRGAPGPAGPPGPPGPASKMDKLTFIDMEGSGYGPDLENFRGPPGIPGSPGPPGVPGLPG VPGTFGGNNTVVPGPPGLPGRAGQDGIPGPPGPPGPSGKDGIQGPPGISGERGTDGDIGL PGAPGTKGGTGEPGIPGTPGETGLAGLPGPIGPRGVPGPPGPPGPSGRGTADGFDDMEGS GIGFGGRGIQGRPGVPGEKGDAGYPGLPGPKGDRGIAGLDGRPGLDGFPGPQGQRGDKGD QGERGEPGRDGIGIPGPPGPPGQIIYRSSDGRDIIGGTREGSRDLKGEPGEQGYTGLPGL KGEKGESGSMLGPDGTLLTGGAKGDMGPRGPVGPMGPLGPAGQKGEIGLPGRPGRPGVNG LKGEKGESSDPTGFGIRGPPGLPGPPGPPGQTVYGDSSSIGPQGYPGQKGERGIPGGKGD QGDIGPPGPPGTFPYDFSTFGRGEKGQKGESGVGDGRGSQGPPGNPGYPGLPGAKGESIQ GPPGPRGPPGAAGVGYEGRQGPPGPPGPPGSPGQQSYPGPGPNRPVLSIPGPPGPPGPPG TPGGSGGYSTATVLQTYQTMLNVGPSLSEGTIVLVLEQAELYVRVRDGFRKILLGDYVTG NNQGNEIAAKQPPVVIYPGSRDSGSYQSTDINVPPRNEAPPPVNPQAIPQPPPQVFPRPV EPEGNVPIHTHAEYQAALHLVALNAPLTGSMRSIRGVDFQCFEQARKAGLHGTFRAFLSS RLQDLYSIVRKADRLSVPIVNLRDENLFENWEALFSGSEGQMRPGARIYSFDGRDVARDS TWSQKMIWHGSDAKGRRLTESYCETWRTDEGIVTGQASSLSSGKLLEQRPQSCNKNFIVL CIENSFMPGGQK NT seq 4719 nt NT seq  +upstreamnt  +downstreamnt atggctccgacacagctttggcctgtgctggctatcctgctgttgaccttacctgcactg cctcatgcacagctctttaactggcttggctggggtgcaaagccaacaattcctgctgaa caactgaagacaaccatcgagcctgcagttgtggctactactgcagcacctcattcctct gattcattatctcccgaaggaagcagccttcctaaagcaaggacaattgtaggcaaggag acctcttctacagtaagggatgaaaaggacatcacaattgcaacgtctccatcttcagag cctgcagctacaacatcttcatctgcagctgcgtcttctccatctaaccagacttctatc ccagccgcttcaacaacaaattcaagcacatcaaccacacagaaacagcttgctggcact gtgactacagcagcctctttgaacgatcagctgcaaattccagaatctcctgcgactgtt aaaaagcctccagaaaatcagattttcaatatttttcagattcatgaaggggggctaaac agtggttctgatgttcagcatgcaacacctacatcaaatgatgtatccacctctctgcct gaggcctcaaccactcagaagactaaagataaaaatattgcaggcgtgggtgctgagatc ttaaatgttgctgaaaatattcgagatttcatgaatgtttgggaagagaaagataaggac ttgctaccttctactgaccaaccacctgctgaacaagagttaggggagttaatcaatgta acccttcatgcaaatcaaagtggcaacctaagtcagtatggcatggggcaggacaacagc agcaacaccacagaaaaatatacacatagcccattagccctttccaataaccagacccta aacgtcacccaggtgccttcaagaaatgttacatctgctcaaccagaacgggtgaatgta gaagttggcctcctgcagctcattggagatccaccaccagaacagatcaccaaaatcttt ggccctgacaagacccctggctatgtatttggagaagatgccaacacaggacaggtggca cagtaccaccttccaagccccatgtttagggacttttctattctgttccacatacagcct accactaaaaaggctggaatgctgttctccatcactgatgcttcacagtctattgtgtac gttggggtgaagctatcggaagtcaaagatggcaagcaacagatcatttttttctacacc gagcctggatcagcagtgtcctaccctgctgccaccttcactgtcccagcaatgacgaac caatggacgcgctttgctctcagtgtggaagaagaggaggttaccctgttcatggagtgt aatgaactgaagagagtccgttttgaaaggtcacctgatgagatggagttggaggatgga tctgggcttttcgtggctcaggctggaggggctgatcccgaccgctatcagggtgtaata gcagagttaaaagtcaagagtgacccgagagctgcagaacttcaatgtgaagaggaagga gatgattctgatggggcatctggagactttggcagtggccttccagaagaggaagaagtt gaggtgactcgacctccagcagtattagaactagttcctatcacagtgccccccatacag aggccatctgtgtgggtcacagccaaaatcattgaagctcttgttacaggcaaaccggga cagaaaggtgagaaaggagacagaggtgagcgcggcgagaagggcaacataggtcaagct gggtctaaaggagattctggtaccagtacaagtgggggccttgcctctaaaggtgataag ggccagaaaggagagcttggagtcaagggtggtgctggctttggttatcctggtccaaag ggacagaaaggagaacttggattacctggcccaccaggaccatctggatcctccgggcct tccgttgtgcagaaagctgatggcactaccgtgcagcagatcacagggccacaaggcccc ccaggtcctcaagggcccccaggaaaagaaggagagcctggggaagttggacctcaggga ttcccaggaactccaggtgatccagggcagaaaggagacaagggtgatcctggtgttgga agtagaggagctccaggcccagctggacccccaggcccacctggcccagcttccaaaatg gataaattgacattcattgatatggagggttctggctatggcccagatttggaaaacttt aggggaccacctggtatacctggctcacctggccctcctggagtacctggattaccaggg gtaccaggaacctttggtggaaacaatactgtagtcccaggaccccctggtctacctggt cgggctggacaagacggaatacctggaccccctgggcctccgggtccttctggaaaagat ggaatccagggcccccctggaatttctggagagaggggtactgatggtgatatcggactt ccaggagctcctggaaccaaaggaggtactggggaacctggcattcctggaactcctgga gaaactggattagctggacttcccggaccaattggaccccgtggagtgcctggacctccg ggaccacctggcccttctggacgtggaactgctgatggatttgatgacatggaaggttca gggattggttttggtggccgaggcatacagggaaggcctggagttcctggagagaaggga gatgcaggatatccaggacttccaggaccaaagggtgatcgaggaattgctggtttggat ggaagacccggattggacggattcccaggccctcagggtcaaaggggagacaaaggtgat caaggagaacggggagaaccaggccgtgatggaattggaattcctggaccacctggacct cctgggcaaattatttacagatcatcggatggcagagatatcattggtggaacaagagag ggttctagagacctcaaaggagagccaggagaacagggttacacaggcctgcctggccta aaaggagagaagggagaatcgggaagtatgctgggccctgatggtacactactcactgga ggagcgaagggtgacatgggaccaaggggccctgttggacctatgggaccactgggacct gctggacagaaaggagaaattggattacctggaagaccgggtcgccctggtgtgaacgga cttaagggagagaagggagaatcttctgatcctactggctttggaattagggggccacca ggtcttcccggcccacctggtcctccggggcaaacagtttatggtgactcaagttctatt gggccacaaggctatccaggtcagaaaggcgagagaggaattccaggagggaaaggggat caaggagacattggccctcctggaccaccaggaacattcccatatgatttcagtaccttt ggaaggggtgagaaaggacaaaaaggagaatctggagttggtgatggtcgaggatctcaa ggacctcctggtaaccccggatatcctggactgccaggtgctaaaggagagagcattcaa ggtcctcccggcccacgtggtccaccaggagctgctggtgtaggatatgaaggaagacaa ggaccacctgggccaccaggacctccaggttcccctggacaacaatcataccctggacct ggacccaatagaccagttttaagcattccaggaccaccaggaccccctgggccacctgga accccaggaggatcaggaggatattccacggccactgtactccagacttatcagacaatg cttaatgtggggccgtcattgtcagaaggaaccattgtactagtgctggaacaagcagag ttatatgtacgagtcagagatggcttcagaaagattcttcttggagactatgtaaccggt aataatcagggtaatgaaattgctgcaaagcaacctcctgtggtcatttatcctggtagc agagactccggatcctatcagtctacagatatcaatgttcctcccaggaatgaagcacca cctccagttaatccacaagctattccacagccaccacctcaagtcttccccaggccagtg gagccagagggtaatgtgcctatacacacacatgcagaataccaggcagcactacacctt gtggctctgaatgcacccctaactggcagcatgcgttccatacgtggcgtggacttccaa tgctttgaacaagcccgcaaagctggacttcatggcacattccgagcattcctttcctca cgtcttcaggatctgtacagtattgtccgcaaagctgacaggctgtctgtgccaattgtt aatctcagggatgaaaacctgtttgagaactgggaggcccttttctctggctcagaggga cagatgcgtcctggagctcgcatttactcatttgacggaagggatgtggcaagagattct acttggtcacagaagatgatctggcatggatctgatgccaagggtcgacgtctaacggag agctactgcgagacctggcgcacagatgaaggcatagtcactggccaggcttcatctctc agcagcgggaaacttctagagcagcgtcctcagagctgcaataagaacttcattgtcctg tgcattgaaaacagcttcatgcctggcggccagaagtag

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