KEGG   Nanorana parkeri (Xizang Plateau frog): 108788881
Entry
108788881         CDS       T04897                                 
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04140  Autophagy - animal
npr04148  Efferocytosis
npr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:npr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108788881 (VPS41)
   04148 Efferocytosis
    108788881 (VPS41)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108788881 (VPS41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:npr04131]
    108788881 (VPS41)
Membrane trafficking [BR:npr04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    108788881 (VPS41)
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 Clathrin zf_RING_Vps8_fungal WD40_CDC20-Fz WD40_Prp19 Beta-prop_THOC3 Beta-prop_HPS5 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_1st Vps39_1 Pep3_Vps18 Beta-prop_WDR3_2nd zf_RING_Vps8 Beta-prop_RIG_2nd zf-RING_2 Beta-prop_WDR19_1st zf-RING_5 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_ACSF4 Beta-prop_WDR19_2nd zf-rbx1 zf-C3H2C3
Other DBs
NCBI-GeneID: 108788881
NCBI-ProteinID: XP_018414277
LinkDB
Position
Unknown
AA seq 867 aa
MTDFFLVMAETQAFPGSPEQEGMTPEESTEESEEDDSEEEPKLKYERLSNGVSDILQDDA
ASCMTVHEKFLAMGTHNGKVYLLDIQGNTTQRFDISTVKINQISLDESGEHVGICSEDGK
VQVFGLYSREGLHEIFDCPIKIVAVHPQFGKSNCKQFVTGGNKLILYERTWLNRWKTTIL
HEGEGNITSIKWRGNLIAWTNNMGVKILDIITRQRITNIPRDDTSLRPDMYPCSLFWKDN
LTLVIGWGKSVKICAVKERHPSEIRDLPNRYVEIVSQFDAEFFISGIAPLCDQFVMLFFV
KETSDKANKEFCARPRLDIIQPHADCCEEVSSDAITVRGFQENECRDYRLEYAEGESLFY
IISPRDVVVAKERDQDDHIDWLLGRKKYEEALMAAEISQKNIKRHEVLDIGLAYITHLVE
KEDYDMAARKCQKILGKNMKLWEDEVYRFKKIGQLKAISKYLPRGDLRLRPAIYEMILDE
FLKTDYEGFATLIREWPGDLYNNKTIVKALKGHLNKDPNNRILLKALAELHTYDQCYSQA
LEIYLTLRHKEVFELIHKHNLFSSIKDKIVLLMDFDTVKAVDMLLDNEDKISIDKVVVEL
KERPELQHVYLHKLFKRDHHKGQKYHEKQISLYAEFDRPNLLPFLRDSTHCPLEKALEIC
LQRNFVEETVFLLSRMGNSRRALQMIMEELHDVDKAIEFAKEQDDAELWEDLILYSIDKP
PFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVSD
SLSLLNKMHRTQSRAMLVDEDNICEACLSPILPTDTSKPLGVVVFHCRHMFHRECLSVGN
TMSPVYFCNICSAKHRGPGTAILDIKK
NT seq 2604 nt   +upstreamnt  +downstreamnt
atgactgacttcttccttgtcatggctgaaacgcaggcattccctggatctccagagcag
gaaggaatgacccctgaagagtccactgaagaatcagaggaggatgacagtgaagaggaa
ccaaagttgaagtatgaaaggctgtcgaatggcgtaagtgacatcttgcaggacgatgca
gcaagttgtatgacagtccacgagaagttcctggccatggggactcacaatgggaaggtt
tatttgctggacatccaaggaaacacgacccagaggtttgatattagcactgtgaaaatc
aatcagattagcctggatgaaagtggggaacatgtaggcatctgttcagaggatggcaag
gtgcaagtgtttgggctatattcaagagaaggattacatgaaatttttgactgtccaata
aagattgttgctgttcatcctcaatttggaaagtctaactgtaagcagtttgtcactgga
ggaaacaagttgatcttatatgaaagaacgtggctgaaccgatggaaaacaactatacta
catgaaggggaagggaatataaccagcatcaagtggagggggaatctcattgcttggacc
aataatatgggagtaaagatacttgacatcatcacaaggcagaggataactaatattccc
agagatgacacaagcctacgccctgatatgtacccttgcagcctcttttggaaagataat
ctgactcttgtaattggatggggcaaatctgttaagatttgtgctgtgaaagagagacat
cccagtgaaataagagacctaccaaatcgttatgttgagattgtgtcacagtttgatgca
gaattcttcatcagtggaatagcacctctctgtgatcagtttgtgatgcttttctttgta
aaggagacttcagataaagcgaataaggagttttgtgccagaccacgccttgatataatt
caaccacatgcagattgttgtgaagaagtgtcctccgatgccataacggttaggggattt
caggaaaatgagtgtcgtgactatcgcttagaatatgctgaaggggaatccttgttttat
attatcagcccaagagatgttgttgtggcaaaagaaagagaccaagatgaccatattgac
tggttgctggggagaaagaaatatgaggaagctcttatggctgcagaaatcagtcagaaa
aatattaagcgacatgaggttttggatattggattagcctatataacacatctggtagaa
aaagaagattatgatatggctgccaggaaatgtcagaaaatacttggtaaaaatatgaaa
ctctgggaagatgaggtgtaccgctttaagaagattggacagttaaaggcaatcagcaag
tatttgccgagaggtgatttacggctaagacctgcgatttatgaaatgatcctggatgaa
tttttgaaaactgattatgagggattcgcaacactaataagagaatggcctggagacctg
tacaataacaaaaccattgtaaaagctttaaaggggcatctgaacaaagacccaaacaac
agaatacttctgaaggctctggcagaattgcatacatatgatcagtgttacagtcaagct
cttgaaatttatttaacacttcggcacaaagaggtatttgaactgatacacaaacataac
ctcttcagctccatcaaggacaaaattgtcttactcatggattttgatactgtgaaagct
gtggatatgcttttggacaatgaagacaagatttctattgataaagttgtggtggaatta
aaagaaaggccagaactacaacatgtgtacttgcacaagcttttcaagagggaccatcac
aaaggacagaagtaccatgagaaacaaatcagcctgtatgcagaatttgacagaccaaat
cttctgcctttccttcgagacagcactcattgcccactagaaaaggcacttgagatttgt
cttcagagaaattttgttgaagagactgtgtttttattaagtagaatggggaacagtcgc
agagccttgcagatgataatggaggaactacatgacgtggataaagccattgagtttgca
aaagaacaggatgatgctgagctgtgggaggaccttattctgtactctattgataaacca
ccatttataactggattacttaataacattgggacccatgttgatccaatcttactgatt
caccgcattaaagaaggaatggagattcctaatctaagagactcacttgtcaaaatcctg
caagactacaacctccagatacttctaagagaagggtgcaaaaaaattttagtatcagac
tccttatcgctgctaaataaaatgcacaggactcagtcaagagctatgctggttgatgag
gacaatatttgtgaagcttgcctatcaccaattctgccaacagacacttctaagccactt
ggtgtggtggtatttcactgcagacacatgttccacagagagtgtctgtctgtcggtaac
acaatgtctcctgtttacttctgcaatatctgtagtgcaaaacatcgcggtcctgggact
gcaatcctagacataaagaagtag

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