Nanorana parkeri (Xizang Plateau frog): 108788881
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Entry
108788881 CDS
T04897
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04140
Autophagy - animal
npr04148
Efferocytosis
npr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108788881 (VPS41)
04148 Efferocytosis
108788881 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108788881 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npr04131
]
108788881 (VPS41)
Membrane trafficking [BR:
npr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
108788881 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
zf_RING_Vps8_fungal
Beta-prop_HPS5
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML_2
Vps39_1
Pep3_Vps18
zf_RING_Vps8
zf-RING_2
Beta-prop_RIG_2nd
zf-RING_5
Beta-prop_WDR19_1st
WDR55
zf-rbx1
Beta-prop_WDR19_2nd
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
108788881
NCBI-ProteinID:
XP_018414277
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MTDFFLVMAETQAFPGSPEQEGMTPEESTEESEEDDSEEEPKLKYERLSNGVSDILQDDA
ASCMTVHEKFLAMGTHNGKVYLLDIQGNTTQRFDISTVKINQISLDESGEHVGICSEDGK
VQVFGLYSREGLHEIFDCPIKIVAVHPQFGKSNCKQFVTGGNKLILYERTWLNRWKTTIL
HEGEGNITSIKWRGNLIAWTNNMGVKILDIITRQRITNIPRDDTSLRPDMYPCSLFWKDN
LTLVIGWGKSVKICAVKERHPSEIRDLPNRYVEIVSQFDAEFFISGIAPLCDQFVMLFFV
KETSDKANKEFCARPRLDIIQPHADCCEEVSSDAITVRGFQENECRDYRLEYAEGESLFY
IISPRDVVVAKERDQDDHIDWLLGRKKYEEALMAAEISQKNIKRHEVLDIGLAYITHLVE
KEDYDMAARKCQKILGKNMKLWEDEVYRFKKIGQLKAISKYLPRGDLRLRPAIYEMILDE
FLKTDYEGFATLIREWPGDLYNNKTIVKALKGHLNKDPNNRILLKALAELHTYDQCYSQA
LEIYLTLRHKEVFELIHKHNLFSSIKDKIVLLMDFDTVKAVDMLLDNEDKISIDKVVVEL
KERPELQHVYLHKLFKRDHHKGQKYHEKQISLYAEFDRPNLLPFLRDSTHCPLEKALEIC
LQRNFVEETVFLLSRMGNSRRALQMIMEELHDVDKAIEFAKEQDDAELWEDLILYSIDKP
PFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVSD
SLSLLNKMHRTQSRAMLVDEDNICEACLSPILPTDTSKPLGVVVFHCRHMFHRECLSVGN
TMSPVYFCNICSAKHRGPGTAILDIKK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgactgacttcttccttgtcatggctgaaacgcaggcattccctggatctccagagcag
gaaggaatgacccctgaagagtccactgaagaatcagaggaggatgacagtgaagaggaa
ccaaagttgaagtatgaaaggctgtcgaatggcgtaagtgacatcttgcaggacgatgca
gcaagttgtatgacagtccacgagaagttcctggccatggggactcacaatgggaaggtt
tatttgctggacatccaaggaaacacgacccagaggtttgatattagcactgtgaaaatc
aatcagattagcctggatgaaagtggggaacatgtaggcatctgttcagaggatggcaag
gtgcaagtgtttgggctatattcaagagaaggattacatgaaatttttgactgtccaata
aagattgttgctgttcatcctcaatttggaaagtctaactgtaagcagtttgtcactgga
ggaaacaagttgatcttatatgaaagaacgtggctgaaccgatggaaaacaactatacta
catgaaggggaagggaatataaccagcatcaagtggagggggaatctcattgcttggacc
aataatatgggagtaaagatacttgacatcatcacaaggcagaggataactaatattccc
agagatgacacaagcctacgccctgatatgtacccttgcagcctcttttggaaagataat
ctgactcttgtaattggatggggcaaatctgttaagatttgtgctgtgaaagagagacat
cccagtgaaataagagacctaccaaatcgttatgttgagattgtgtcacagtttgatgca
gaattcttcatcagtggaatagcacctctctgtgatcagtttgtgatgcttttctttgta
aaggagacttcagataaagcgaataaggagttttgtgccagaccacgccttgatataatt
caaccacatgcagattgttgtgaagaagtgtcctccgatgccataacggttaggggattt
caggaaaatgagtgtcgtgactatcgcttagaatatgctgaaggggaatccttgttttat
attatcagcccaagagatgttgttgtggcaaaagaaagagaccaagatgaccatattgac
tggttgctggggagaaagaaatatgaggaagctcttatggctgcagaaatcagtcagaaa
aatattaagcgacatgaggttttggatattggattagcctatataacacatctggtagaa
aaagaagattatgatatggctgccaggaaatgtcagaaaatacttggtaaaaatatgaaa
ctctgggaagatgaggtgtaccgctttaagaagattggacagttaaaggcaatcagcaag
tatttgccgagaggtgatttacggctaagacctgcgatttatgaaatgatcctggatgaa
tttttgaaaactgattatgagggattcgcaacactaataagagaatggcctggagacctg
tacaataacaaaaccattgtaaaagctttaaaggggcatctgaacaaagacccaaacaac
agaatacttctgaaggctctggcagaattgcatacatatgatcagtgttacagtcaagct
cttgaaatttatttaacacttcggcacaaagaggtatttgaactgatacacaaacataac
ctcttcagctccatcaaggacaaaattgtcttactcatggattttgatactgtgaaagct
gtggatatgcttttggacaatgaagacaagatttctattgataaagttgtggtggaatta
aaagaaaggccagaactacaacatgtgtacttgcacaagcttttcaagagggaccatcac
aaaggacagaagtaccatgagaaacaaatcagcctgtatgcagaatttgacagaccaaat
cttctgcctttccttcgagacagcactcattgcccactagaaaaggcacttgagatttgt
cttcagagaaattttgttgaagagactgtgtttttattaagtagaatggggaacagtcgc
agagccttgcagatgataatggaggaactacatgacgtggataaagccattgagtttgca
aaagaacaggatgatgctgagctgtgggaggaccttattctgtactctattgataaacca
ccatttataactggattacttaataacattgggacccatgttgatccaatcttactgatt
caccgcattaaagaaggaatggagattcctaatctaagagactcacttgtcaaaatcctg
caagactacaacctccagatacttctaagagaagggtgcaaaaaaattttagtatcagac
tccttatcgctgctaaataaaatgcacaggactcagtcaagagctatgctggttgatgag
gacaatatttgtgaagcttgcctatcaccaattctgccaacagacacttctaagccactt
ggtgtggtggtatttcactgcagacacatgttccacagagagtgtctgtctgtcggtaac
acaatgtctcctgtttacttctgcaatatctgtagtgcaaaacatcgcggtcctgggact
gcaatcctagacataaagaagtag
DBGET
integrated database retrieval system
