Nanorana parkeri (Xizang Plateau frog): 108789292 Help Entry 108789292         CDS       T04897                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism npr  Nanorana parkeri (Xizang Plateau frog) Pathway npr04140   Autophagy - animal npr04148   Efferocytosis npr05132   Salmonella infection Brite KEGG Orthology (KO) [BR:npr00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     108789292 (VPS39)    04148 Efferocytosis     108789292 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     108789292 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:npr04131]     108789292 (VPS39) Membrane trafficking [BR:npr04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     108789292 (VPS39) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Motif Other DBs NCBI-GeneID:  108789292 NCBI-ProteinID:  XP_018414768 LinkDB All DBs Position Unknown AA seq 876 aa AA seqDB search MHDAFEPVLILEKLPLQIECLAAWEEWLLVGTKQGHLLLYRVKKETGCNQFEVTLEKSNK HFAKKIQQIHVVPQFKILVSLLDNNVCVHDLLTFQLMTTISKAKGASLLSCDLQVTKSGE ETLKMCVAVRRKLQLYYWMDRSFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD GKGSIKELFPTGKQLEPLAVPLGDGKVAVGQDDLTVVLNEEGTCTPKCALNWTDIPMAME HQPPYIIAVLPRYVEVRTFEPRLLVQSIELQRPRFISSGGSNIVYVASNHFVWRLVPVSI ATQIQQLLQDKQFELALQLARMKDDADGEKRQQIHHIQNLYAFNLFCQKRFDESMQVFAK LGTDPTHVIGMYPDLLPSDYKKQLQYPNHVPLLSGAELEKANLALIDYLTQKRSHLVKKL NDTDYHSTTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLEPNHCHVEE SEHVLKKAHKYSELIILYEKKGLHEKALMVLVDQSKKANSPLKGHERTVQYLQRLGAEKL SLIFEYCVWVLRDYPEDGLKIFTEDLSEVENLPRNHVLEFLLENFRHLAVPYLEHIILVW EDQGPEFHNCLIKLYCERVQTLMQAQGPDFNEGIMSTFPAGSEDGELGEYRGKLLNFLEI SNCYQPERLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILRDTGMAEQYCHKHYDRA KDGNKDVYLSLIRMYLSPPDVHCLGPIKIKLEEPKPNIDAALAVLEQHHAKLNTTKAIEL LPANTQIRDIQIFLEKVLEENAERRRFNQILKNLLHAEFLRVQEERISHHQVKCVITEEK ICNVCKKKIGNSAFARYPNGSVVHYFCAKDTSSGDS NT seq 2631 nt NT seq  +upstreamnt  +downstreamnt atgcatgacgcctttgagccggttctgatcctggagaagctgccgctccaaatagagtgt ctggcagcctgggaggagtggcttcttgttggaacgaagcagggtcatttgctgctctac agagtcaaaaaagaaacaggttgtaaccagtttgaagtaactttggagaaatcaaacaaa cactttgctaagaaaattcagcagatccatgttgttcctcagtttaagatcctggtcagt ttgcttgataacaatgtgtgtgtccatgatttgctcaccttccagcttatgaccacaatt tcaaaagctaagggtgcttcactactatcatgtgacctccaggtcactaaatctggagaa gagactctaaagatgtgtgttgccgtccgtagaaaattgcaactgtattactggatggac agatcgtttcatgaacttcagggagacttcagtgttcccgatgttcccaaatccatggca tggtgtgaaaactccatctgtgtgggattcaagagagattattatttaatcagagtagat ggaaaaggctcaattaaggaactcttcccaacaggcaagcagcttgaaccattggcagta cctttgggtgatggaaaggttgcggtgggtcaggatgatctcacagtggtgctgaatgag gagggaacttgcacaccaaagtgcgcattaaactggacagatatcccgatggcaatggaa catcagcctccatatattattgctgtcttgccgcggtatgtggaagttcggacgtttgaa ccccgtctgctggtgcaaagtattgaacttcagcgaccacgcttcatttcatctggagga tcaaacattgtatatgtcgccagcaaccactttgtctggagattggtccctgtttcaatt gctacgcaaatacagcagctgctccaggataagcagtttgagctcgccctgcagctagca aggatgaaagatgatgcagatggtgagaagcggcagcagatccaccacattcagaacctt tatgccttcaacttattttgccagaagcgctttgatgagtctatgcaggtttttgctaaa cttggcactgatcctacgcatgttattgggatgtatccagatctgctgccttctgattat aaaaaacaacttcagtaccccaatcatgtaccgttactgtcaggagcagaactggagaaa gccaatctggctctcatagattacttaacccagaaaagaagtcacctggtaaagaagcta aatgataccgattaccactcaaccacttctccattaatggaagggactccaaccatcaag tcaaagaagaaacttctccagattatagacaccaccttgctcaaatgttacttgcataca aatgtggctttggtggctcctctcctccggttagagcctaatcactgccatgtggaagag agtgaacatgtcctgaaaaaggcacataagtacagtgagttgatcatcctttatgagaag aaagggctacatgaaaaagctcttatggttcttgttgaccagtcaaagaaagccaactct ccattgaagggccatgaaaggacagttcagtacctgcagcggttgggagccgaaaaactt tctttgattttcgaatactgtgtatgggtgctgagggattatcctgaagatggcttaaag atcttcactgaagacctctcagaagttgaaaatctcccccgtaaccatgtgctagaattt ctgttggaaaacttcaggcatctagcagttccgtatttggaacatatcatcctggtatgg gaagatcaaggacccgaattccacaactgtctgatcaaactttattgtgaaagagtgcag actttgatgcaagcacaaggccctgactttaatgaaggaatcatgagtacatttcctgcc ggctcagaggatggggagctgggagaataccgcggaaagctgctaaattttctggaaatc tcaaactgttaccagcctgaacggttgatcagcgacttcccatttgatggattgttagag gaacgtgcacttctcctgggccgaatgggcaaacatgagcaggctttgttcatatacgtg cacattttgagggacaccggtatggcggagcagtattgccataaacattatgaccgtgct aaggacggcaataaggatgtgtatttgtcccttatcaggatgtacctctcgccgcctgat gttcactgtctgggtcctatcaaaataaagctggaagaaccaaaaccaaacattgatgct gcactggcagttttggagcagcatcatgcaaaactaaacacaaccaaggccatagaactg ctaccagccaacacacaaatccgagacatccagatcttcctggaaaaagtactggaagag aatgcggagaggaggcgcttcaaccaaatcctcaagaatctcctacatgccgagttcttg cgagtacaagaggagagaatctcccaccatcaggtgaagtgtgtgatcacagaggagaag atatgtaacgtgtgtaagaagaagattggaaacagcgctttcgctcgctatcccaatggc agcgttgttcactatttctgtgcaaaggataccagctcaggggattcctga

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