Nanorana parkeri (Xizang Plateau frog): 108789327
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Entry
108789327 CDS
T04897
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npr04131
]
108789327 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npr04147
]
108789327 (COPB2)
Membrane trafficking [BR:
npr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108789327 (COPB2)
Exosome [BR:
npr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108789327 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
WD40_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
108789327
NCBI-ProteinID:
XP_018414802
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVGDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MMIKLWDWDKKWFCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGETEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELVRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVATAQETHEGVSEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSTV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVIPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAEAEQKWKQLAELAISKCQFGLAQECLHNAQDYGGLLLLATSSGNTTMVNKLAEGAE
RDGKNNVAFLSYFLLGKMDTCLELLISTGRLPEAAFLARTYLPSQVSRVVKLWKESLSKI
NQKAADSLADPTEYENLFPGLREAFMGEQFLKQQSSALRPASEYRHVTPNEERNVLAEAK
GFVHPEALQEEEEEREVTPPPAAPEPIAPSSAPALTPVPVTPVDKSTEEKAFLDLEEDLD
NMELEDIDTTDINLDDELSDD
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgacttgacatcaagaggaagctgaccgctcggtctgaccgagtgaagagt
gttgatttacatccaacagaaccatggatgctggccagtctgtacaatggcagtgtttgt
gtttggaaccacgagacacagactcttgtaaaaacttttgaagtaggcgatttgccagtc
agagcggcgaagtttgtggccaggaaaaactgggtcgtcacaggagcagatgacatgcag
atcagagtattcaactacaatacattggagcgggttcacatgtttgaggctcattctgac
tatatccgctgtattgctgtacaccccacacagcctttcattctcaccagcagtgatgac
atgatgattaaactttgggattgggataagaaatggttttgctctcaggtgtttgaaggc
cacacacactacgtcatgcagattgtcatcaaccccaaagacaacaaccagtttgcaagt
gcctcacttgaccgcactattaaggtttggcagcttggctcctcttctcctaatttcact
ttagaaggacacgagaaaggggtaaactgcattgattattatagtggaggtgacaagcca
tacctcatctctggagctgatgacagacttgtgaagatttgggactaccagaacaaaacc
tgcgtccaaactctggaaggacatgctcagaatgtttcttgtgtcagtttccatcccgag
ctccccattataatcacaggctcagaagatggcactgttaggatttggcattccagcact
taccgattagaaagtactctgaactacggcatggagcgggtctggtgtgtatgtggactt
cggggctccaacaatgttgctcttgggtatgatgagggcagcatcattgttaagctgggt
cgtgaagagccagcaatgtctatggatgcaaatggcaaaatcatctgggccaagcactcg
gaagtgcagcaggccaatctaaaagccatgggcgaaacagagattaaggatggagaaagg
ctccctcttgctgtaaaggacatgggcagctgtgaaatctatccacagactatacaacac
aaccccaatggcaggtttgtggtagtgtgcggagatggagaatacattatatacacagcc
atggcactgagaaacaagagctttggatctgcacaagagtttgcctgggctcatgactct
tctgagtatgctattcgtgaaagcaacagcgtagtaaagatcttcaaaaattttaaagag
aagaagagctttaagcctgattttggggcagaaggtatctatggtggctttcttcttggt
gtccgctctgtcaacggtttggctttctatgattgggagaatacagaacttgttcgtagg
atagaaatccagcccaaacacattttctggtcagactctggagagctggtctgtattgct
acagaggaatcattcttcattctcaaatacttgtctgagaaagtagccacagcacaggag
acacacgagggagtgtctgaggatggaatagaagatgcttttgaagttctgggtgaaatt
caggaaatagtgaagactggcctgtgggttggagattgttttatctacaccagcacagtg
aacagactcaactactacgtaggaggagagattgttaccattgcacacttggacaggacc
atgtatttgctgggttacattcccaaagataaccgtctgtacctgggagacaaagagctg
aacattgtcagctactctctgctggtgtcagttctggagtatcagacagctgtgatgaga
agagatttcggcatggctgacaaagtcattccaaccatccccaaagaacagaggacacgt
gttgcccacttcctggagaagcagggattcaaacaacaagccttagctgtgtccactgac
ccagaacatcgatttgagctggcactgcagctgggagaactgaagatcgcatatcagttg
gcagtggaggcagaggctgaacagaagtggaagcagctagctgagttggccatcagcaag
tgccagtttgggctggctcaggaatgtctccacaatgctcaggactatggaggtctcttg
cttttagcaacatcttcaggaaataccaccatggtgaacaagttggctgaaggtgctgaa
agagatggaaagaacaatgtggctttcttaagctactttttgctaggaaagatggacact
tgcttggagcttctaatttccactggtcgtctgcctgaggctgctttcttggcacgtact
tacctgccaagccaagtgtcccgggtggtgaaactatggaaggagagtctgtccaagatc
aaccagaaggcagccgactccttggctgaccccactgagtatgagaatctttttcctggt
ttacgggaagcctttatgggggagcagtttttaaaacagcagagcagtgccttgcgccca
gccagcgaatatcgccatgtcactccaaatgaagaaagaaatgtcttggctgaagcaaag
ggatttgtacatcctgaagcattacaggaagaggaagaagagagagaggtaactcctccc
cctgctgcacctgaacccatagcaccctcttctgctccagccctcaccccagtcccagtg
acaccagtagacaaaagcacagaggagaaggccttcctggacctggaggaggatttggac
aacatggaattagaagatattgatacaacagacataaacttagatgatgagctctctgac
gactaa
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integrated database retrieval system
