Nanorana parkeri (Xizang Plateau frog): 108789377
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Entry
108789377 CDS
T04897
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108789377 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npr03041
]
108789377 (PRPF4)
Spliceosome [BR:
npr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108789377 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_DCAF4
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_RIG_2nd
WD_LRWD1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Ge1_WD40
WD40_like
WD40_RFWD3
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
108789377
NCBI-ProteinID:
XP_018414872
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MSDDEGVPVVKKSRIFYGSLAEKEKERLAKGESSMGRAAVKAGFDAGNINITTGESFDLE
EHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNV
LSVVGTDALKKTKKDEEKAKTSSEEYQKTWYHEGPSSLKAARLWIAKYSLPRAMERLEEA
REYRNIPESTRTSQKQELHKSLRSLNNFCSQIGDDRPLSFCHFSPNSKLLATACWSGLCK
LWSIPDCTPVRTLRGHNTNVGAIVFHPKSTVSLDEKDVNLASCAADGSVKLWNLESDEPV
ADIEGHTVRVARVVWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSKGVYDLSFHID
GSLAATGGLDSFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDL
RQRRCIYTIPAHQNLISGVKFQPTNGQYLLTGAYDNTAKVWTHPLWSPLKTLAGHEGKVM
GLDISLDGELIATCSFDRTFKLWMAE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgatgaaggtgtcccagtggtgaagaagtcacgtatcttctatggcagtttg
gcagagaaggagaaggagcgtcttgccaagggggaatcgtcaatgggcagggcagcagta
aaagctggattcgatgctgggaacattaacatcactactggagagtcatttgacctagag
gagcacatcagcgagaggcaggcagaggtcttggcggagtttgagaggaggaagcgggcg
agacagattaatgtgtccactgatgactctgaggtgaaggcctgtctgagagcactcggg
gaaccaatcactctctttggtgaaggcccagctgaaaggagagaaaggttgcggaacgtt
ctttctgtcgttggcacagatgcattaaaaaagactaagaaagatgaagagaaggctaag
acatcaagtgaggagtatcagaagacctggtatcacgagggcccttcctctctaaaagcc
gcccgcctgtggattgccaaatactcccttccacgggcaatggagcgtcttgaagaggcc
cgagaatatcggaatatcccagaatctactaggacctctcagaaacaagagctgcacaaa
tctctgagatccctgaataacttttgcagccaaatcggagatgaccgaccgttgtcattc
tgtcattttagtcccaattctaaactcctggctacggcatgttggagtggactttgcaaa
ctgtggtcaattccagactgtactcctgtgcgcacattaagaggacacaacacaaatgtg
ggagccattgtgttccaccccaaatccacagtgtcgctggatgagaaggatgtgaatttg
gcttcctgtgctgccgatggatctgtaaaactttggaacctggagagtgatgaaccagtc
gcagacattgaaggccacacagttagggtggcgagagtagtgtggcatccatctggacgt
ttcttggggaccacctgttatgaccgctcgtggagattgtgggatctggaagctcaggag
gagattctgcaccaggaagggcacagtaaaggggtgtatgacctttccttccacatagat
gggtctctggccgccaccggaggcttggattcttttggtcgagtgtgggatctgaggacc
ggtcgctgcattatgttcctggaaggtcatctgaaagagatctatgggatcagcttctca
cccaatggttatcacatagcaacaggtagtggcgacaacacctgcaaagtgtgggacctg
cgtcagagacgctgtatatataccatccctgctcatcagaacttgatcagtggagtgaag
ttccagcctacgaatggtcaatatctcctgacaggagcatatgataacacagccaaggtg
tggactcaccctctctggtctccattgaagaccctggctggacacgagggtaaggtgatg
gggctggacatctcgctggatggagagcttattgccacctgttcctttgatagaactttt
aagctgtggatggcggaatga
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integrated database retrieval system
