Nanorana parkeri (Xizang Plateau frog): 108789417
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Entry
108789417 CDS
T04897
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npr03009
]
108789417 (DCAF13)
04121 Ubiquitin system [BR:
npr04121
]
108789417 (DCAF13)
Ribosome biogenesis [BR:
npr03009
]
Eukaryotic type
90S particles
Other 90S particles
108789417 (DCAF13)
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108789417 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
KNTC1_N
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
108789417
NCBI-ProteinID:
XP_018414931
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKVKVLCRNPDDYVRETKKDLQRVPRNYDPSLHPFEVPREYTRALNATKLERVFAKPFVA
SLDGHRDGINCMAKHPKSLSTVFSGACDGEVKIWNLATRQCTRTIQAHEGFVRGLCVRFC
GTSFFTVGDDKTVKQWKMESPGYGEKEEPIHTILGKTVFTGVDHHWRDPMFATCGQQVDI
WDEQRTSPVRSYSWGVDSINSVRFNPIETHILGSCAADRSIVLYDKRRPTPLKKIILEMR
TNAICWNPMEAFIFTAANENYKLYTYDMRYMDSPVRVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFSVESGHSREVFHTKRMQHVTCARWSSDNKYILCGSDEMNIRIWKANPSEKL
GLLTPRERAAQNYNQKLKEKFQHHPQIKRISRHRHLPKSIYSQIKEQRIMKEARRKKEMN
RRKHSKAGTVPEVSEKKKPVVAVVD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaaaggtgctgtgtcggaatccggacgactatgtacgggagaccaagaaggac
ctgcagagagttcctcgaaactatgatccttccctgcacccattcgaggttcctcgggag
tacaccagagccctcaacgcaaccaaacttgagcgagtgtttgccaagccgttcgttgct
tcattagatggtcacagagatggcatcaactgtatggcgaaacatcccaagagcttgtca
acagtgttttcaggagcctgtgatggagaggtgaagatttggaatttggccactcggcag
tgtaccagaaccatacaggcacatgaaggatttgtccgaggactctgtgttcgcttctgt
ggaacatccttttttacagtgggtgatgataagacggtaaaacagtggaagatggaaagt
ccaggatatggagagaaagaggagcctatacatacaatactgggcaagactgtctttaca
ggagtggaccatcattggagggatcctatgtttgccacttgtgggcagcaggtggacatc
tgggatgagcagaggacgagtcctgtgagatcttactcgtggggagtggacagcattaac
agtgtccgatttaatcccattgagacacacattttaggaagctgcgcagctgaccgaagt
attgtcctttatgacaagcggagacctacaccactgaaaaagattattctggaaatgaga
acaaatgcgatctgctggaaccccatggaagcttttatttttacggctgctaatgaaaac
tacaagctgtacacctatgacatgcgctacatggacagcccagtgagggtgcacatggac
cacgtgtctgctgtcctggatgtggattattcccctactggaaaggaatttgtatctgcc
agctttgataaatccattcgcatcttctcagttgaaagtggacacagcagggaagtgttt
cacacaaagaggatgcagcatgtaacctgtgccagatggtcatcggacaacaaatatatt
ctctgcggttcggatgaaatgaacatccgcatatggaaagccaacccttcagaaaaactt
ggcctgctgacgccacgtgagagggctgctcagaactataaccagaagcttaaggaaaaa
ttccagcatcacccgcaaatcaagagaatttcaagacacagacacctccccaaatccata
tacagccagataaaggagcaacgcatcatgaaggaagctcgtcgcaagaaggaaatgaat
cgtcgcaaacacagcaaagcaggcacggtgccagaagtgtcagagaagaagaagcctgtt
gtggccgtggtggactaa
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