Nanorana parkeri (Xizang Plateau frog): 108789450
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Entry
108789450 CDS
T04897
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108789450 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npr03021
]
108789450 (SMARCA2)
03036 Chromosome and associated proteins [BR:
npr03036
]
108789450 (SMARCA2)
Transcription machinery [BR:
npr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108789450 (SMARCA2)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
108789450 (SMARCA2)
Chromatin remodeling factors
BAF complex
108789450 (SMARCA2)
PBAF complex
108789450 (SMARCA2)
GBAF(ncBAF) complex
108789450 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
108789450
NCBI-ProteinID:
XP_018414976
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHQLSSM
GTDFPPEGMHQMHKPPMESMHDKGMSEEMHCATMKSSNMRPPHAGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQIPPAQPGLMIQGDQQQVISQPSRGPSAFSQVQL
HQLRAQILAYKMLARGQPLSENLQLAVQGKRTLPAIQQQPPPQQPPQAQQPPPQQPLVNY
KPPGMGMHPMGVPPTGTGPAPGMAGHAASMGQSTDLGVVSTPQKLAVPPPSGRPSPAPPT
VAPSVALPGPSVPQPTPGQPAPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIA
HRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRLEVVACMRRDTTLETALNSKAY
KRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQK
LSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDE
YVANLTSLVWEHKKAQAAKEKKKKRKKKKVEEIVEGLGSVLDGELIDESSQMSDLPVKVI
HTETGKVLLAPDTPKASQLETWLEMNPGYEVAPRSDSEGSSSEYEEEDEDEESSRLESDE
KKCSDQDYAESSAKHIIETAKQDVDDEYSMSADERQSQSYYGVAHAIIERVEKQSSLLIN
GSLKHYQVQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMELKRLNGPYLIIVP
LSTLSNWQYEFDKWAPSVVKIAYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILA
KLRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPT
IFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEK
VEYVIKCDMSALQKVLYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPFI
FQHIEESFAEHLGYANGIINGPDLYRTAGKFELLDRILPKLRATNHRVLLFCQMTSLMTI
MEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEEGSPVFIFLLSTRAGGLGLNLQAADTV
VIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA
GMFDQKSSSHERRAFLQAILEHEEQNESQKKDELSGDICQEGASQEEDEVPDDETLNQMI
ARREEEFDLFMRMDLDRRREDARNPNRKPRLMEEDDLPSWIIKDDAEVERLTCSEEEEKI
FGRGSRQRRDVDYSDALTDKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDVVVVVKED
GEKKEKKRRGRPPAEKLSPNPPKLTKQMNAIVDTVINYKDSSSGRQLSEVFIQLPSRKEL
PEYYELIRKPVDFKKIKERIRNHKYRSIGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQ
SVFKSARQKIAKEDESEDDSNEDEDEEDEDESESESKSVKVKIKLNKKEDKNRDKGKGKK
RQSRGKAKPVVSDYDSDEDQDDNDQSEGSMSDDE
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgcctacagacccgggtgccatgcctcatccagggccttcccctgggcccggg
ccttcaccgggccccatcctaggaccaagtccaggaccagggccttctccaggatctgta
cacagtatgatgggtcccagccctggaccccctagtgtctctcaccaactctcaagcatg
ggtacagattttccaccagagggcatgcatcaaatgcacaagccccccatggagagcatg
catgacaaaggaatgtctgaagaaatgcactgtgctactatgaaaagctcaaacatgagg
cctccacatgctggtatgggtcctcctcagagcccaatggatcagcacagtcaaggttac
atgtctcctcatccttccccattgggagctccagaacatgtgtccagtccaatgtcaggt
ggaggcccaacacctccacaaataccaccagctcaacctgggctcatgatacaaggagac
cagcagcaagtgataagccagccaagtcgtggtccctcagcatttagccaggtgcaactt
catcaacttcgtgcacaaatattggcttataaaatgttagccagaggacagccattgtct
gagaacctgcaactagctgtacagggaaagagaacactgcctgcgatccagcaacaacca
ccaccccagcaaccaccacaagcacaacagccgccaccgcagcagccccttgttaattac
aaacctccaggtatgggaatgcatccgatgggagttccccctactgggacaggaccagct
ccaggaatggctgggcatgcggctagtatgggacaaagtaccgatcttggtgtagtaagc
acgcctcagaaacttgctgtaccacccccaagcggaagaccatcaccggcaccacccaca
gttgctccctctgttgctctgccaggtccatcagttccccagcctactcctggacagcca
gctccaattgtacagctccagcaaaaacagaaccgcatcagccccatccagaagccccag
ggactggatcctgttgaaatactgcaagaaagagaatacagacttcaggctcgtattgcc
cataggatccaggaactggagaacttacctggctctctaccacctgacctgagaaccaag
gccacagtggagttaaaggcccttagacttttaaacttccaacgccagctgaggctggaa
gttgtggcatgtatgcgacgtgataccactcttgagactgccctgaactctaaagcctac
aagagaagcaagcgacagacactacgtgaggctcgaatgactgaaaagctggagaaacag
cagaaaatcgaacaagaaagaaagcgcagacaaaaacatcaggagtatctcaacagtata
ttgcaacatgctaaagattttaaagagtaccaccgatctgtcactggcaaaatccaaaaa
ctttccaaagctgttgccacatggcatgcaaatacagaaagagaacagaagaaggagact
gagcgaattgagaaggaaagaatgagaagacttatggctgaagatgaggaaggatacagg
aaactgattgatcagaaaaaagatcgacgtctggcctatctgctccaacaaactgatgag
tatgtagcaaacctcaccagcttggtgtgggagcacaaaaaagcacaagctgccaaagag
aaaaagaagaagagaaaaaagaagaaggttgaagagattgtagaaggattgggatctgtc
cttgatggcgagcttatagatgagagcagtcagatgagcgacttgccagtaaaggttatt
cacacagagacggggaaagttctccttgctccagatacacctaaagccagtcagcttgaa
acatggctggagatgaacccaggatatgaagttgcacctagatctgacagtgaaggaagc
agctcggaatatgaagaggaggatgaagacgaagaatctagcagattggaatcagatgaa
aagaaatgctctgatcaggactatgcagaaagcagtgctaagcatatcattgagactgca
aagcaggatgtggatgatgaatatagtatgtcggcagatgaacgacagtctcagtcttac
tacggagtggctcatgctattatagagcgggtggaaaaacaatcgtcccttcttatcaat
ggttctcttaagcattaccaggtccaaggtttggaatggatggtttctctgtataacaac
aatttaaatggaatcctagctgatgaaatgggacttggaaagacaattcagactattgcg
ctcataacatatctgatggagctcaagaggcttaatggtccctatctcattattgttcca
ctctcgacattatccaactggcagtatgagtttgataaatgggctccttctgtggtgaaa
atcgcatacaagggaacaccagccatgcgacggtctctggtgccacagctcagaagtgga
aaatttaatgtcctcttgaccacgtatgagtacattataaaagacaaacacatccttgct
aagctccgatggaagtacatgattgtggatgaaggacatcggatgaaaaatcatcactgc
aagttaacccaggtgttaaacacacactatgtggctccaagacgaatcttgcttacaggc
accccactgcagaacaaattgccagagctttgggcccttctgaatttcctgttacctacc
atcttcaaaagctgcagcacctttgaacagtggttcaatgccccatttgccatgactgga
gagagggtggatttaaatgaagaagaaactatactgatcatccgccgtctgcataaagtg
ttgcgtccctttttgctgagacgactaaagaaagaggtggagtcacagctgccagaaaag
gttgaatacgtcattaaatgtgacatgtcagctcttcaaaaggtcctttaccgccacatg
caagcaaaaggtattctcctcacagatggatctgagaaagataagaagggtaaaggtgga
gcaaaaacacttatgaataccatcatgcagttaagaaagatctgcaatcaccccttcatt
ttccagcacattgaggaatcctttgctgaacatctgggatatgctaatggtatcatcaac
gggcctgatttgtacagaaccgcaggaaagtttgagttgcttgatcgaattctaccgaag
ctcagagccacaaatcaccgtgtcctgcttttctgtcagatgacctcgctcatgaccatc
atggaagattactttgcttttcgcaactttctttaccttcgccttgatggcactaccaag
tctgaagacagagctgcattactgaaaaaatttaatgaagaaggttcaccggtctttatc
ttcttgctgagtactagagctggaggtttgggacttaaccttcaggctgcagacacagtc
gttatttttgacagtgactggaatcctcatcaggacttacaagcacaagacagagcacat
aggattggtcaacagaacgaggtgcgcgtgttacgtttgtgcactgtaaatagtgtggaa
gaaaagattcttgcagccgccaagtacaaactgaacgttgatcaaaaggttattcaggct
gggatgtttgatcagaaatcttcaagccatgaaaggagagcatttcttcaggccattcta
gaacatgaagagcagaatgagagccaaaagaaagatgaactttcaggagatatttgccaa
gaaggtgccagccaggaggaagatgaagttcctgatgatgaaacactgaaccagatgatt
gcacgccgtgaagaagagtttgacctttttatgcgtatggatctagatcgccgcagggaa
gatgcccgaaatccaaaccgtaaaccacgtttgatggaagaagatgaccttccctcctgg
atcatcaaagatgatgctgaagttgaacgtctcacttgttcggaagaggaggagaaaata
tttggcagaggatcacgccagcgtagggatgtcgattacagtgatgcccttacagacaaa
cagtggctcagagcaatcgaggacgggaatttagaggaaatggaagaggaagtccggctg
aaaaagcgcaagaggcgaagaaatgtggataaagatgttgttgttgtggtgaaagaagat
ggtgaaaagaaagagaagaagagaaggggacgaccccctgctgaaaagttgtcaccaaat
ccaccaaagctaaccaaacagatgaatgctatagtcgatactgtaataaactataaagac
agcagctctggacgacagctaagtgaagtctttatccagctcccctctagaaaagaactg
ccagagtattatgaattaatccgtaagcctgttgacttcaaaaaaataaaggaaagaatt
cgtaatcacaaatatagaagtataggtgacctagagaaggatgtcatgttgctttgccac
aatgcacagacatttaacctagaagggtcacagatatatgaagattcaattgtgctacaa
tcagtcttcaagagtgcaagacaaaagattgcaaaagaggatgaaagtgaagatgacagc
aatgaagatgaagacgaggaagatgaagatgagtcagaatcggagtcaaaatctgtgaag
gtgaaaatcaagctaaacaagaaggaagacaagaatcgagataagggaaagggaaaaaag
cgccagagtcgtgggaaagccaaaccagttgtcagcgattatgacagtgatgaagatcaa
gatgataatgatcaatctgaaggaagcatgagcgatgacgagtaa
DBGET
integrated database retrieval system
