Nanorana parkeri (Xizang Plateau frog): 108789549
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Entry
108789549 CDS
T04897
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
FN3_Tor_3rd
fn3_2
YbbR
Motif
Other DBs
NCBI-GeneID:
108789549
NCBI-ProteinID:
XP_018415104
LinkDB
All DBs
Position
Unknown
AA seq
1452 aa
AA seq
DB search
MQLLFALIIIRAVSSLQASGSGRLRLAVLAEDRLQMKWKEAEGTSNVYKVLVKPLTGDPE
QEVMLKTKTAKATVGGLDPVKEYVLQIHVIQGGQNTLIAKKKFIIEDLKTQVRNDKKKVD
VTPTPRVMESSSPAEGSITVTERREDKEQLDTPSPRSQVPEGRKPGPQNATLLPRPTQKI
SSKSEREVSVTPSTPRRGPVHQCDTALEWDIILLVDSSWSVGRANFRLVKNFLWGILSPL
HISRDKIRVGLSQYSGEPQTEWDLNSYSTKAEVLEAIKRVKYKGGNTFTGMALTHVLEEN
LRAASGARAQVGKVLVLLTDGKSQDDAITVAQTLKEAGIYMFAIGVKNADESELREMASL
PTDLTVHMVADFPMLSPLVGDVSRALCMRLKERRKEVDIGSQKVAMPVSVDPHPSPTQLV
VSDVTARSMRVSWTPPQQPVRKYRIVYYPSRGGTPQEVVLDGDSTSAVLKNLTARTDYLV
SVFPIYVSGVGSGLRGITSTLPLSAPRELSVVQVTDTSFEVHWQPSEGASYYMVTYSWET
GHKEEVKEIKTGDTKVLVSGLSLNTTYSVTVVAAAGEETSDPVTIQQTTEPVRHSLRFTN
VTHSSVTLYWEVAPPNGTIQHISYTSDVSNAIAKEVEIPGGTTSVTLKSLTSQTPYTIAL
AITNRMLKTLFLLTGNVTTLKVPPPSGVKVVDLYGDKATVWWDPGADDVISYLIKWIPLS
GGRLSQLSVPGGEHSAVLADLEYSTEYQVSISARYADGSQSDASSARYRTVKVPPPSGVK
VVDLYGDKATVWWDPGADDVISYLIKWIPLSGGRLSQLSVPGGEHSAVLADLEYSTEYQV
SISARYADGSQSDASSARYRTGDNPRKMPAGRGGFGPVRTDGTCPLIKAKDREDEFPGYD
MMVVFGLHEKLYSSINGVSIDAFVLGRSRIYTVAENAQLTIWTREVHPHGLLQEHGLSFL
FRLPANAAQEPFALWQLTDEDFQPVVGIILDPNQQSLTYFSPELEGSLQEVTFDEEEVKK
IFYGSFHKLQVAVSKTKIRLYVDCQLVTEKVVKPMGKVTTLGFEMLGKLTRTRGPRSGSS
AGAFSEGGHRCAYFGNLHTGSPRRVNRHRFRGRACGNSFLALRDENTCPAPTSACTCTSD
VPGPPGPPGFPGPPGPRGSKGEQGEPGQVGEQGVSGQVGPEGSSGYTGSPGLRGMTMTGP
TGPPGLKGEKGDIGSPGLQGFPGLDGKAGKDGTMGPKGVRGLEGNTGLPGPPGPRGIQGV
QGLTGSPGDRGSVGEVGPTGLPGTRGEKGEKGEPQSVSTIYHLVNQVCERLIQAHLIKLE
SVLREKEAQPVPIWDLELKPGEPGPPGPQGLPGEQGEPGVNGAFGQPGQNGYPGKQGSKG
YQGERGAPGKAKEGPTGPPGVIGFPGKEVIGNPGSVGFPGQPGHPGNPGIPGHYGPPGVE
GGCDSSSSYIRC
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcctgttcgcactgatcattatccgggccgtcagcagtctccaggcttcaggc
tctggacggttaaggctggccgttctggctgaggacagattgcagatgaaatggaaggag
gcggaggggaccagcaacgtttataaggtgctagtgaaaccgctgacgggggatcctgaa
caggaagtgatgttgaaaacaaagacagccaaggctacggtgggaggcctggaccccgta
aaggagtacgtcctacagatacacgtcatccaaggagggcagaacaccttaattgccaag
aagaagttcatcattgaagatttgaagacccaagtccgaaatgacaagaaaaaggtggac
gtcaccccaacaccgcgggtcatggagtcctcctcaccagcagagggcagtattacagtc
acagagcggagagaggacaaggagcagttggataccccaagccccagatcacaggtgccc
gaagggcgaaagcctggtccccagaatgctaccctgctgcctagacctacccagaaaatt
tcctccaagtcagaacgagaggtgtcagtgacccccagcaccccacggagagggccggtg
caccagtgtgacacagcgctggagtgggacataattctgctggtggacagttcctggagc
gtgggacgcgccaacttcagactggtgaagaacttcctgtgggggattctcagccccctc
cacatctccagggacaagattagagtcggtctgtctcagtacagcggggagccacagact
gaatgggatctgaactcctattccactaaagcagaagtcctggaagccataaaaagggtg
aagtataagggaggaaacacctttaccggtatggctctcacgcacgtgctggaggagaat
ctacgagctgcctcaggggcgcgcgcccaggtgggcaaagtgctggtcctcttaacggac
gggaagtcccaggatgacgccatcacagtggcgcagaccctcaaagaggccggaatatac
atgtttgctataggggtgaagaacgcagacgaatcggagctgagagagatggcgtccctg
ccaaccgacctgactgtccacatggtagccgactttcccatgctcagccctctggtggga
gacgtgtcccgggcgctgtgcatgcggctgaaggagagacggaaggaggtggacatcggg
tcgcagaaagtcgccatgcccgtcagcgtagacccgcaccccagccccacccaactggtg
gtgtccgatgtcacggccaggagcatgcgtgtgtcctggacccctcctcagcagcccgtc
cgcaagtaccgtattgtctactacccgtcccgtggtggcacgcctcaagaggtggtctta
gatggagattcaacctctgccgtcctgaagaacttgacggctcgcaccgattacctggtc
tctgtctttcccatctacgtcagtggcgtgggctccggactccgaggaatcacctccacc
ttgccgctttctgctccccgtgagctctcagtggtccaagtcactgacacgtcctttgag
gtacattggcaaccatcggagggcgcctcctactatatggtgacctactcatgggagact
ggtcataaggaggaggtgaaagagattaaaacgggagacacaaaagtcctggtgtctggc
ttgtccctgaataccacgtacagcgtgactgtggtagctgcagcgggagaagagaccagt
gacccggtcaccatacagcagaccacagagccagtgcggcacagtctgcggttcaccaat
gtcacccacagcagcgtaacgttgtactgggaggtagcgccacctaatggaacgatccag
cacatctcttatacatctgacgtgagcaatgccattgctaaagaggtggagatccctggt
ggcaccacctctgtgaccctgaaatccctgacctctcagactccatataccattgccctg
gctatcacaaaccgcatgctgaagactttgttccttctgacgggaaacgttacaacattg
aaggttccgcccccaagtggagttaaagtggtagacctgtacggcgacaaggccacggtg
tggtgggacccgggagctgatgacgtcatctcttatttgatcaaatggattcctctgagc
ggagggaggctcagtcagctgtcagtcccgggaggtgaacacagtgcggtccttgccgac
ttggagtacagcacggagtaccaggtgtccatctctgcccgctacgcggatggctcacag
agcgatgcttcctccgcacgctacaggacagtgaaggttccgcccccaagtggagttaaa
gtggtagacctgtacggcgacaaggccacggtgtggtgggacccgggagctgatgacgtc
atctcttatttgatcaaatggattcctctgagcggagggaggctcagtcagctgtcagtc
ccgggaggtgaacacagtgcggtccttgccgacttggagtacagcacggagtaccaggtg
tccatctctgcccgctacgcggatggctcacagagcgatgcttcctccgcacgctacagg
acaggagacaatccccggaagatgcccgcgggccgcggaggctttggacccgtccggaca
gatgggacgtgtccattaattaaggccaaagacagagaagacgagtttcctggctatgac
atgatggtggtcttcggacttcatgaaaagctctactcctccatcaatggggtctccatt
gacgccttcgtcttggggagatcaaggatctatacggtggcagagaacgcccagctgacc
atctggaccagagaagtccaccctcatgggctcctccaggaacacgggctcagcttcctc
tttcgcctgcctgccaacgccgcccaggaaccgttcgccttgtggcagctgacggatgaa
gatttccagccggttgtcgggatcatcctggatcccaatcagcagtcgttgacctatttc
agccccgagcttgagggaagcttgcaggaggtgaccttcgatgaggaagaagtgaagaag
attttctatgggagtttccacaagttgcaagttgcagtgtctaaaacaaaaattcggctc
tatgtggactgtcagctggtgacggagaaggtggtaaagcctatgggaaaggtgaccaca
ttaggatttgagatgttggggaaactgaccaggaccaggggcccgaggagcggctcttca
gcgggagcattttcagaaggaggccaccggtgcgcgtatttcggtaacttgcacacaggc
agcccacgaagggttaaccggcatcggtttcgaggccgtgcctgcggaaattccttcctc
gctctgagagatgagaacacatgccctgcccccacctccgcctgtacctgcacctccgat
gtgccgggaccacccggccctcctggatttccggggccaccaggacctcgagggtccaaa
ggagagcagggcgagccaggacaagtgggagaacaaggcgtgtccggacaggtgggtcca
gaaggttccagcggatacacgggctcccctggcctccgcgggatgacgatgactggcccc
acgggacccccggggctgaagggtgagaagggcgacattggaagtccaggactgcagggt
tttccgggtctggatgggaaggcaggaaaggacgggacgatgggacctaagggtgtacga
ggattggagggaaatacaggcctccccggcccccctggaccccgggggattcaaggggtc
caaggactaactggaagtcctggagatagaggatctgttggagaagttgggcccacgggt
cttcccggcactcgaggtgagaaaggcgagaagggggaacctcaatctgtctccaccatc
taccacttggtgaatcaggtgtgtgagaggctcatacaggctcacctgataaaattggag
tcagtcttgcgggagaaagaggcacagcctgtccctatctgggatttggaattaaaacca
ggagaacctggacctccaggacctcaggggctaccaggagagcagggagaacctggagtt
aatggagcatttggacaaccaggccagaatggatacccagggaagcaaggatccaaagga
tatcaaggagagagaggtgctccaggaaaagctaaagaaggcccaacaggacctcccgga
gtgataggttttccaggaaaggaagtcattggaaatccagggtctgtgggctttcctggg
caacccggccaccctggaaatccaggaatccctggacattatggacctccgggggtagaa
ggtggctgtgactcctcttcctcttacatcaggtgctga
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