Nanorana parkeri (Xizang Plateau frog): 108789593
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Entry
108789593 CDS
T04897
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npr03036
]
108789593 (CHD9)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108789593 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
108789593
NCBI-ProteinID:
XP_018415153
LinkDB
All DBs
Position
Unknown
AA seq
2860 aa
AA seq
DB search
MTDPMMDFFDDTHLFDETLGLSDDAFSQHDAVSLVDELNLGAEFEPLHVDSLNHVQDSQT
HQKISEFDTLSQFESMKLHPVSQSYSSPVESVLSPRSQFSCSPIHPPSQGNGIFSDDGSP
MWGHQTATSIPSQNGSPFHQHGHSQTMQQSKGYVTHHDFALFQASEQQRVSAPQPQHNRH
SINACQETMTQQKNFIDINVSLPHRTSNAQQTPMVNHTNIQDSLPLEQFSQSAASLHFCS
NPIGTQHESTFDSHSTAPCSVNATPPFSAHYSFSNNHLNHGTHSLSDFTESPGFPELGTK
QEPSQHVLNPSEQLHSNDFHMVHSSHSQGNYNGTKMSPMTISFPSQDGSSVRLSHFNDHM
ESNGFSPLEDNLLQQVNAQTEPFTGLDPVDLLQEDLLPHFDDAAYAQESSNSHQAMLEHP
DNMAHSEQHPMSVPNDLLNSQRLAQHNPWNSTASNHLNLIDRRHLCLQREPPSSKKLDGS
RAYHKLPNSKVRSASERRTKKKGDSESKQEKANRIISEAIAKAKERGERNIPRVMSPDNF
PSMSSSEGKEEKRGRKAKSKPKDKESKKTKAGLTSKLKEKKKIGKLIITLGRKQKRKIES
SDDVSDTDTTSRALKDEDPQKRRSNRQVKRKKYAEEVEGKIFEDEPKANVKTKKSGAPLP
AEQPLQLFVENPSEEDAAIVDKILSSRILKNETQSGMLVDAEEFYVKYKNYSYLHCEWAT
EQQLLKDKRIQQKIKRFKIRQAQRAHFFADMEEELFNPDYVEVDRVLEVSFCEDTDTGEP
VIYYLIKWCSLPYEDSTWELKEDVDHSKIEEFEQLQALRPDTRKVDRPPPNSWKKINHSR
EYKIGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLHEIFQTGIRSPFL
IIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYSRDSQGRVIRGAYKFHAI
ITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMSLEHKVLLTGTPLQNT
VEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAP
KEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKG
AEEKILGEFRETHNPMATDFYLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLD
ILEEYLMHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADT
CIIFDSDWNPQNDLQAQARCHRIGQDKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQ
SMSGRENSGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIE
SEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDSVSGRNSLVIDTPRIRKQ
TRPFSATKEELEELSEAESEGDDKPKLRRPCDRSSGYGRTECFRVEKNLLVYGWGRWRDI
LSHGRFKRQLNDQDVEIICRALLAYCLVHYRGDEKIKSFIWDLISPTEDGRTRELQNHLG
LSAPVPRGRKGKKVKSQTSTFDIHKAEWLRKYNPEHLLQDDGYKKHLKHHCNKVLLRVRM
LYYLKQEVIGTQSKNVLEGVDVSEINLWVPEPDHSELPVGWWDAEADKSLLIGVFKHGYE
KYNTIRADPALCFLERAGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPALFKDEMEDDAS
SPGDLVIADGDVQGPEGDKSYWPTQSALTTRLRRLITAFQRTTKFRQIQQIPAMFPIHAA
VTQAPYEDVSLNPKVAAKIERQQRWTRREEADFYRVVSTFGVVFDPGRGQFDWTKFRAMA
RLHKKTDESLEKYLYAFIAMCRRVCRLPSKEDIADTSVSIQPITEERASRTLYRIELLRK
VREQAIRHSQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDYHILRDPELS
FMASQKNYNQTKGTSSTSLIAPPNQLPLSSSPLTPQLRTHELKGSPIEEIKLKDDAGKED
IPVSEEEPVKIKEEAPSLVNGPLTHTGEPKPSAKSETNRRMVAARTEPLTPNLTSKKQRI
SKRGSASSSDSDSDSNHSSCSSRSSSSSSSSSSCSRSGSSSSSSSSSSCSSSSSSSSSSS
SSSSSSEDSDSDDGDGQKCERVPHVKAYDEESVASLSTIQDETQDSFQLDNGIPTSNCLV
QGGYMFAAAHWPKDRVIINRLDSICQAVLKGKWPTPRKTYDGVRVVTFYTNQLLDSPGAA
SEYIEPGLQPSTCVAVKAEPCQSPQMSKVKKHVPDKEFTVKINDEGGLKLTFQKQGIPQK
RPLDGEEALGQQQYLARLQDLQNASEASLVTFPKPLAASGTSNTLSTPGMNGMASDAQPA
VKKRRGRRKNVEGVDILFMNRNKMLNHVNPALAPSLSQPLSGHQVLPGALDADSPVPVIN
LKDGTRLAGDDAPKRRDLESWLKAHPGYVEDRGAFIPRMQLHDGRPKQKRHRCRNPNKLD
VNSLTGDERVQLINKRNARKVGGAFAPPLKDLCRFLKENPEYGVAPEWGDVVKQSGFLPD
SMFDRILTGPVVREEVSRRGRRPKSEIARAAAATAAGNSVNVSPLLANGLIPGMDISSYQ
ALQQNFQSLQSLQLTAGLIGLPAGLSASGGDAKNMAAMFPMLLAGLPNLLGMGNLLNKSS
EPSAKEKAKNCTNDCKEAENGKERTMSPSGDKARQNSSPPSTSMGTALQAGSLSINPLLL
PNILYPGMLLTPGLNLHIPAVPQPNIFEVQNTSKDAGPVAVPDSTAESPPAPSQKEKARN
EVGSQNENSTDDCSEKAEPSSGSNSPSSSSSEDSDSSEED
NT seq
8583 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccgatgatggattttttcgatgacacgcacctgtttgatgaaacattgggc
ctatctgatgacgcattttctcagcatgatgcagtatccttggttgacgaattaaacctt
ggagcagagtttgagccgctccatgttgattctttaaatcatgtgcaggattctcaaaca
caccaaaaaatcagtgagtttgatacactcagccagtttgagtctatgaagttacatccg
gtaagccagtcttacagtagcccggttgagagtgtcctgtctccacgatcgcagttcagc
tgctctccaatacatccaccaagtcaagggaatggtatcttttctgatgatggaagccct
atgtggggccaccaaactgccacaagtattccaagtcaaaatggctccccattccaccaa
cacggacactctcagactatgcagcaaagcaaaggatatgtaacacaccatgattttgcc
ttgtttcaggccagtgaacagcagcgggtctcagcaccgcagccacagcacaataggcac
agtattaatgcctgccaggagaccatgactcaacaaaaaaacttcatagatattaatgtt
tctttgccacataggacttcaaatgcccagcaaacaccaatggtaaatcatacaaacata
caagattctttacctttagaacagttttctcaatcagcggcatcattgcacttttgtagc
aacccaattgggacacaacatgagagtacatttgatagtcactctacagcgccatgttcc
gtgaatgctacaccaccgttttcagctcattattctttctctaacaaccaccttaatcac
ggcactcattctttgtctgattttactgaaagcccaggatttccagaattaggaaccaag
caggaacctagtcaacatgtcctcaaccctagtgaacaattgcattcgaacgatttccat
atggtgcattcttcacattctcagggtaactacaatggaacaaagatgtctccaatgacc
atcagctttccatcccaagatggttcttctgtacggttgagtcactttaatgatcatatg
gagagtaatggcttttcacctttggaagacaacctgttgcagcaagtaaatgcacaaaca
gaaccattcacaggacttgatccagtggatttgctacaggaagatttactgccacacttt
gatgacgcagcttatgcccaagagagctcaaattcacaccaggctatgctagaacatcct
gacaacatggctcatagtgaacagcaccccatgagtgtccccaatgatcttctcaactca
cagcgactagcccagcataatccttggaactccacagcatccaatcatctcaatctgatt
gaccggcgacacctgtgcctccagagggaacctccctcctctaaaaagcttgatggttcc
cgggcctaccacaaactgccaaattccaaggtgagatcggcgtccgagaggcgcactaaa
aaaaagggtgattcagaaagcaagcaggagaaggccaatcgtattatatctgaagcaatc
gccaaagccaaggagaggggtgagaggaacattccccgggtcatgagccctgacaacttc
cccagcatgtcctcttcagagggcaaggaggagaaacgtggacggaaagcaaagtccaaa
cctaaggataaagaaagcaagaaaaccaaagctggtctgacctccaaactgaaagaaaag
aagaagattggaaaattgataattactttgggccggaagcagaagagaaaaattgaatcc
tcagatgatgtctctgacactgacacaacttctcgtgctctgaaagacgaagaccctcag
aaacgtagatcaaaccggcaagtgaagaggaagaaatatgcagaagaggtggaagggaag
atttttgaggatgaaccaaaggccaatgttaaaaccaagaagagtggagctcctctgcca
gcagagcaacctttacagctgtttgtggagaacccaagtgaagaagatgcggcaattgtg
gataaaattttatcatccagaatattgaagaatgagactcaatcggggatgttggttgac
gcggaagaattttacgtcaagtacaaaaattactcttatttgcactgcgaatgggccacc
gagcagcagctgctgaaggataaaagaattcagcagaagataaaacgcttcaagatacgg
caggcacaacgggcacacttttttgctgatatggaagaagaactatttaaccctgattat
gtagaagttgatcgcgtgctagaagtttctttttgtgaagatacagatacgggggagcct
gttatttattatttaataaagtggtgttcccttccgtatgaagatagcacatgggaactg
aaggaagatgttgaccactccaaaatagaggagtttgaacagctgcaagctcttaggcct
gacactaggaaagtggatcgaccaccccccaattcctggaagaagatcaaccactcacga
gagtataaaattgggaatcagctcagagaataccaactggaaggacttaactggttgctt
tttaactggtataacagacggaactgcattctagcggatgagatgggtttgggtaaaact
atccaaagcataacattcctgcatgagatcttccagacaggcatccgtagccctttcctc
atcatagctccactctccaccatcacaaactgggaacgagaatttcgcacatggaccgat
ctcaacgtagttgtctatcatggaagcatgatcagccggcaaatgatccagcaatatgaa
atgtattcacgggactcccaaggtcgtgttatccgaggagcatacaagttccatgccatt
atcactacttttgaaatgatcctgggaggctgcccagaactcaatgctattgaatggaga
tgtgttataattgatgaggcacacaggctgaagaacaagaactgcaaattgctggaggga
ctgaaactcatgagcctggaacacaaggtgcttctaacaggaaccccactacaaaacaca
gtggaggaactcttcagcctgctgcacttcctggagcctttgcgctttccctccgaatct
actttcatgcaggagtttggtgacctcaagaccgaggagcaggttcagaaacttcaggct
attcttaaaccaatgatgcttcggagacttaaggaagacgtggagaaaaaactggcccct
aaagaggaaactatcatagaggttgagctgacgaacatccaaaagaaatattatagggcc
attctggagaagaactttgcctttttgtcgaaaggggctgggcaagcaaatgttcccaac
ctagtcaacaccatgatggaactgcgtaaatgctgtaaccacccatatctcatcaaaggt
gctgaagagaagatcctgggagagttcagggagacgcacaatcctatggctacggatttc
tacctccaggccatgattcagtctgctgggaagctggtcctcatcgataaactgctgccc
aaaatgaaggcaggaggccacaaggtgctcatcttctcccagatggtgcgttgtctggac
attctagaggaatatctcatgcacaaaagatatctgtatgaacgcatagatgggcgagtc
cgaggaaacctccggcaagctgctattgatcgcttcagtaagccggattcagatcgcttt
gtgtttttgctttgcaccagggcaggtggtctgggaattaacttgactgctgctgacacc
tgcatcatattcgactctgactggaacccacagaatgacctccaggcacaagcccgatgt
cataggattggtcaggacaaagctgtaaaagtttatagactaataacaagaaattcctat
gagcgggagatgtttgaccgagcaagcctcaagttgggtttagacaaagctgtgctacag
agtatgagtggaagagaaaatagtggtggaattcagcagctttcaaagaaagagatcgaa
gaccttcttagacgtggagcatatggagccatcatggatgaggaggatgaaggatcaaaa
ttttgtgaagaagatattgaccagattcttcagaggaggacaaagacaatcaccatagaa
tctgaaggaaggggttcaacatttgctaaggccagttttgtggcttctgggaatagaact
gacatctcattggacgatccaaacttctggcagaagtgggcaaaaaaggctgaaattgac
attgactcagttagtggccgaaacagtttggttatagacactcccagaatccgcaaacag
acccggccttttagtgccacaaaagaagaactggaggagttgtctgaagcagaaagtgaa
ggagatgacaagcccaagctacgaagaccatgtgatcgatccagtggttatggaaggact
gagtgcttccgcgtggagaagaatcttttggtatacgggtggggaagatggagagacatt
ttgtctcatggccgtttcaagaggcagctaaatgatcaagatgttgaaatcatctgtcga
gctttgctggcgtactgtctagtgcactacaggggagatgagaaaattaagagtttcatc
tgggatctcatctctccaacagaagacgggcggacgcgagagctacagaaccatcttggc
ctgtctgctccagtgccacggggaagaaaagggaagaaagtaaaatcccagactagcacc
tttgacatccacaaggctgaatggttgcggaaatataacccggagcacctgctgcaagat
gatgggtacaagaagcacttaaagcatcactgcaacaaggttttacttcgagttagaatg
ctgtactatctcaagcaagaagtgattggcacccagagcaagaacgttctggaaggagtg
gatgttagtgaaatcaatttatgggttcctgagccagatcattcggagttacctgtgggc
tggtgggacgctgaagcagataaatctcttctaataggggtatttaaacatggttatgaa
aaatacaacaccatcagggcagacccagcactctgcttcctggaaagggctggaaagcct
gatgaaaaggctgtggcagccgaacaaagggccaatgattacatggatggggatgttgaa
gatccagagtacaaaccagctcctgctttatttaaggatgaaatggaggatgatgcttca
tctcctggtgatcttgttatagcagatggtgatgttcaggggcctgaaggtgataaaagt
tactggcccacacagtcagcactaaccacacgcctccgtcgacttataacagcattccag
cgcactaccaagtttaggcagatccaacaaatcccagcaatgtttccaattcacgcagca
gtaacacaagcaccttatgaagatgtttccttgaatccaaaagttgctgcaaaaatagaa
agacagcaaaggtggactcgaagagaggaagctgacttttatagggttgtctctacattt
ggcgtggtgtttgatccagggagagggcaatttgattggaccaagtttcgagcaatggcc
agacttcataagaaaacagatgaaagtcttgagaaatatctttatgcctttatagcaatg
tgtcggagggtgtgtcggttgccttctaaagaagacattgcagacacgtcagtatcgatc
cagccaatcacagaggagagagcctccagaacattgtaccgcattgagctcttgaggaag
gttcgggaacaggctatacgtcattcacagctgtttgagcgcttaaaactatgtcagcca
aacccagacttgcctgtgtggtgggaatgtggtacacacgacagagatttgttaattgga
gctgctaaacatggcgtgagcaggacagactatcacattttgcgggatcctgagctttcc
tttatggcatctcaaaagaactacaaccagactaaaggaacttcctctacttctctaata
gccccaccaaaccagctgcccttatcatcctcacctcttactcctcaattaagaacacat
gaactaaaggggagccccattgaggagattaaacttaaagatgatgctggaaaggaggat
attccagtgtcggaggaagagcctgtgaaaattaaagaagaggcaccaagtcttgtcaat
ggcccactgactcatactggagaacctaagccaagtgccaagtcagagaccaataggcgc
atggtagcagcaaggactgagcctcttacgccgaacctaacttccaagaaacaaagaatt
agcaaacgaggttcagcctcaagttcagactctgattcagattcaaaccactcgtcatgc
tcctccagatcttcctcttcctcatcttcctcctcttcttgctctcgctcaggatccagt
tcttcctcctcctcttcctcctcctgctcctcttcctcctcttcgtcttcctcctcttca
tcttcatcgtcttcatctgaggatagtgacagtgatgatggagatggacagaaatgtgaa
cgagtgccccatgtcaaggcttatgatgaagagagtgtagcctctctgagcaccatacaa
gatgaaactcaggacagctttcaactggacaacggaatcccaacctcaaactgtcttgtg
caaggtggatatatgtttgcagctgcccactggccaaaggatcgtgtaataattaacaga
ttggacagtatatgccaagcagtattgaaaggaaaatggcccacgccccgaaaaacctat
gatggagtccgtgtggtgaccttctacaccaatcaactgttagatagccccggggctgcc
tccgagtacattgaaccaggtttacagccatccacctgcgtggccgtcaaagccgaaccc
tgccaatcaccacagatgtcaaaggtgaagaagcatgtaccagacaaggagtttacagtg
aaaatcaatgacgagggtggcttaaagctgacatttcagaagcaagggattcctcagaaa
aggcctctggatggtgaggaggcactgggacagcagcagtatttggctcgactacaggat
cttcagaatgcctctgaggccagccttgtaacctttccaaaacccttggcagcatcaggt
acttctaatacactatcaactcctggtatgaatggcatggcatcagatgctcagccagct
gtcaaaaaaaggagaggaaggaggaagaatgtagaaggagttgatatcttgtttatgaac
cggaataagatgctaaatcacgtgaacccggctttggctccttccttatctcagccttta
tctggccatcaggtgcttccaggagcactggatgcagacagccctgtccctgtcattaac
ttaaaggatggcacacggctagcaggggacgatgcaccaaaaagaagggatctagagagc
tggcttaaagcacatcctggttatgtagaagaccggggggcttttatacctagaatgcag
cttcatgatggtaggcccaaacagaagaggcaccgatgtcggaatcccaacaagctggat
gtgaacagccttactggagatgaacgtgttcagctcatcaacaagagaaacgccaggaag
gttgggggagcatttgcccctccccttaaagacctgtgccgattcctgaaggaaaatcca
gagtacggagtggctcccgagtggggggacgttgtaaagcaatctggtttcctcccagat
agtatgtttgaccgtatcctaactggccctgtggtgcgggaggaagtgagcaggagaggc
aggaggccaaaaagtgaaattgccagggcagcagcagccacagcagctggaaactctgtc
aacgtcagccctctgctagcaaatggccttatcccaggcatggatatttccagctaccaa
gctttacagcagaacttccagagtctccagtctttgcagctgacagctggattaatcggc
ttgcctgcaggtctctctgcttctggtggagatgccaaaaatatggccgccatgttccca
atgctgctggctggattacccaatcttttgggtatgggaaacctgttgaacaaatcctca
gagcccagtgccaaggagaaagcgaagaactgtacaaatgactgcaaagaagctgaaaat
ggcaaagaaaggacgatgtccccttctggtgacaaagccaggcagaactcaagccctcct
tccacatctatgggaactgctctacaagcaggttccttatctatcaacccactgctgtta
cccaatatactctacccagggatgcttctcactccaggccttaatcttcacatcccagct
gtgccgcaaccgaacatttttgaagtacagaatactagcaaagatgctggtccagtagct
gtcccagattccaccgcagaatcgcctcctgcccccagccagaaagaaaaagcgaggaat
gaggttggctctcaaaatgagaacagcacagatgactgttctgagaaggcagaaccttcc
tcaggatcaaacagcccctcttcttcctcgtctgaggactcggattcttcggaggaagac
taa
DBGET
integrated database retrieval system
