Nanorana parkeri (Xizang Plateau frog): 108789883
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Entry
108789883 CDS
T04897
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npr03000
]
108789883 (SOX5)
Transcription factors [BR:
npr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108789883 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
108789883
NCBI-ProteinID:
XP_018415522
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MLTEPDAPPEFERMSSKRPASPYGDADGEVAMVTSRQKMEDDESGALAAFHLPLHASFPN
KPHAEEFQAVSLLTQDACDHRSPTYQHSSMDIDGNKVVSSFAPHISATSPMKADEGGRQS
GESVTNNALGTPERRKGSLADVVDSLKQRKMEELIKSEPEETPSIEKLLSKDWKDKLLAM
GSGNLGDIKGTPESLAEKERQLMAMINQLTSLREQLLAAHDEQKKLAASQMEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRALAAAAQQGFLI
PPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGHKIPGM
PQGNLGAMSPTNMNTEKCTSSPPPKSKDKQSLDCLSQQMAVKQNDDGKFSHTMMDFNLSG
DSDGSAGVSESRIYRESRGRGSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI
LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIM
RSRRQEMRQYFNVGQQAQIPITTTGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMQVI
QSTFSIKGEEPHIKEEIQNDHMNGEIYDEYEEDDDPDADFVSDSEHHSAGQAN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgagccagacgcaccgccggagtttgagaggatgtcttccaagagaccggcc
tctccgtatggggatgcagatggagaggtagccatggtgacaagccggcagaaaatggaa
gacgacgagagtggtgccctcgcagcctttcaccttcccttgcacgccagtttccccaac
aagcctcacgctgaagagttccaggcggtttctttgctgacgcaagatgcctgcgatcac
aggagccccacgtaccaacacagctcaatggatattgatggcaataaagtcgtctcttct
ttcgccccgcacatctcagctacctcacccatgaaggccgatgaaggtgggaggcaaagt
ggcgaatctgtgacaaataacgcgctgggaacgcccgagaggcgcaaaggtagcttagcg
gacgtggtggactcgctgaaacagaggaaaatggaggagctgattaaaagcgagccagaa
gaaacgcccagcattgagaagcttttgtcgaaggactggaaggacaagcttctggccatg
ggatcggggaacctgggcgacataaaagggacccctgagagtctggcggagaaggagcgg
cagttgatggcaatgatcaatcagctgaccagtcttcgggaacagctgctggcagcacac
gatgagcagaagaagctggccgcctcgcaaatggagaaacagcgccagcagatggagctg
gccaaacagcagcaagaacagattgcaagacaacagcaacaactattacaacagcagcat
aaaatcaacctactgcagcaacaaatccaggttcagggtcagttgccccctttaatgatc
cccgtgttccctcctgaccagagggcgctcgcggctgcggctcagcaaggcttcctcatc
cccccaggattcagctacaaggccggatgcagtgacccctaccccgttcagctgattccc
actaccatggcagctgctgccgcggcaacgccaggcctggggcctctccaactacagcaa
ttgtatgccgctcagctggctgccatgcaagtctccccggggcacaaaatacctggcatg
ccgcaggggaaccttggtgccatgtctccgacgaatatgaacacagagaagtgcacaagc
agccctccacccaaatctaaggacaagcagtccttggattgtctgtcccagcagatggca
gtcaagcaaaatgatgacggaaagttcagtcacaccatgatggattttaatctgagcgga
gactctgatgggagtgctggcgtgtccgagtcccggatatatcgagagtcccggggacgc
ggcagcagcgagccacatatcaaacgcccaatgaacgccttcatggtgtgggcaaaggac
gagcggaggaagattctgcaggctttccctgacatgcacaattcaaacatcagcaaaata
ctagggtctcgctggaaagccatgacgaatctggagaagcagccttactacgaggaacaa
gctcgactcagcaagcagcacctggagaaatacccagactacaagtacaagccgcggcca
aaacgtacctgcttagttgacggcaagaagctgcggatcggcgagtacaaggcaattatg
cgcagccggcggcaagaaatgagacagtattttaatgtagggcaacaagcacaaatcccc
atcactacaacgggagtggtgtacccaggagccatcgcaatggcgggcatgccatcacct
cacttgccgtcggagcattcgagcgtctcgagcagtcctgagcccggcatgcaggtcatc
caaagcactttcagcatcaaaggagaggagccccacatcaaggaggagatccaaaacgac
cacatgaacggtgaaatttatgacgagtacgaggaggacgacgatccagacgcagatttt
gtcagtgacagtgaacatcacagtgcgggacaagccaactga
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