Nanorana parkeri (Xizang Plateau frog): 108789934
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Entry
108789934 CDS
T04897
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108789934 (ZC3H12B)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108789934 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
108789934
NCBI-ProteinID:
XP_018415582
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MTAWSMVRKLEMEKKRPSKEERAAASEMEYEMGDCSGESDEWTSSESEAEQQGEKSAISS
YVNTLFQGIDISSKPHRQLCRSPCLDRPSFSQSSIQVPLEQAAKTEDAKSSLDREYQAKM
DFSLKLGYNGEQIQSVLNKLGADALINDVLAELVRLGNKGESEAQTSGGSLSSNLVPRGP
CTKEIATPELSLEDDVVDSSDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGH
KDITVFVPAWRKEQSRPDAPIADQEVLRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKL
SFDSDGISVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFL
RKKPVVPEHKKQPCPYGKKCTYGHKCKYYHPERANQPLRSVADELRISAKLSAVKTMSEG
ALVKCGMGPSNSKGDGSMETKRIAPKRQSDPSIRSVALEPEHRLSAARKSEANSVPSLVS
ALSVPTLPPPKCHAVSALNTRSASSPVPGSSQFSHQKSSLEHMTSVHYPPILVTNSHGNS
VSYAEEYPKYESLGDHGYYSMLSDFSNLSISNMHSSDYYNAEQDRAAFSRNSSPCPDSCM
SHNSSDSYSSYSDLYLGISDPGPEDTVKHQRPPPQNRWQPFAHGYHEALTRVQSYGQEEP
MQNSRKQSSSHLALHLQHPLVGARSSCPGDYPAPENMHPSANAQPGRALVMTRMDSISDS
RLYESNPMRQRRPPLCREQHASWDPLPCPRDSYNYHSYPLSNSLMQPCYEPVMVRSMPEK
MEQLWRSPHWPSMASDHREQHIIPEHQYQTYKNLCNIFPPGVVLSVMEKNPHLTDAQQLA
AIIVSRLRSGQHHC
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtccatggtcagaaaactggaaatggaaaagaagaggccgtccaaagaa
gaaagggcggctgcaagtgagatggaatatgagatgggagactgcagtggagaatctgat
gaatggaccagctctgagagtgaagccgaacagcagggggaaaaaagtgccatcagcagc
tatgttaacactctttttcaaggcatagacatttccagcaagccccacagacaactctgc
agatccccgtgtctggaccgtcccagcttctctcagagcagtattcaagttcctcttgaa
caagcagcaaagacggaagatgctaagagcagcctagaccgagagtatcaagcaaaaatg
gacttttccctaaagttgggctacaatggagaacaaatccaatctgtccttaacaagttg
ggagcagatgctcttattaacgatgtcctagctgagctggtgaggctaggtaataagggg
gaatctgaggcacagactagtggaggcagtttgagtagcaatcttgtacctagaggccca
tgcaccaaagaaatagcaactcccgaactgtctttagaagatgatgttgttgacagttcg
gataacctcagaccaatcgtcattgatggaagtaatgtagcaatgagccatggcaataaa
gaggtcttctcatgccgaggaatacaactggctgtggaatggtttctggagaaaggccac
aaagatatcactgtctttgtaccagcttggagaaaggagcagtcaagacctgatgctccc
attgctgaccaggaggttcttcggaagctggaaaaggagaagattcttgtgtttacacca
tcccgccgggtgcagggtcgcagagtggtttgctatgatgaccgtttcatagtcaagctg
tcctttgattctgatggaataagtgtatctaatgataactaccgagacctccagaatgag
aagcctgagtggaagaagtttattgaagagagacttcttatgtattcatttgtcaatgac
aagtttatgccacctgatgacccactaggaaggcatggtcccagtctagaaaatttccta
cgtaaaaagcctgtggttccggagcataagaagcaaccatgtccctatgggaagaaatgt
acgtatggacacaaatgtaaatactaccaccctgagagagcgaaccagcctctgcgatca
gttgctgatgaactcagaataagtgcaaaactgtcagcggtcaagacaatgagtgaaggt
gcgttagtaaaatgtgggatgggcccatctaattccaagggagatggatccatggaaaca
aagcgaattgctcctaaaagacaatctgatcctagtattcgttctgtggctttggagcca
gaacataggctatcagcagcccgcaaatcagaggccaactctgtgccatcacttgtatct
gccttgagtgtgccaactctgccacctcctaagtgtcatgctgtaagtgctttgaacaca
cgttcggcaagcagccctgtgcctggatcatcgcagttctcccaccagaaatcctccttg
gagcacatgacaagtgttcactatccaccaatactggtcaccaacagccatggcaattct
gtcagttacgctgaggagtatccaaaatatgaatctctgggagaccatggttactactca
atgctaagtgacttctctaatttgagcatcagcaatatgcacagctctgactactacaac
gcagagcaggaccgagcagcgttttcaaggaactccagcccatgtccagatagttgcatg
agtcacaacagcagtgactcctattcttcatacagtgacctctatttgggcatctcagat
ccaggacctgaagacaccgtcaaacaccaaaggccacctccacagaatagatggcagcca
tttgcacatggctaccatgaagctttaacacgagttcagagctacggtcaggaggagccc
atgcaaaattcccggaagcagtcctcttcacatttggctctgcatctacaacatccactt
gttggggcacggtcaagctgtcctggagattacccagcgccagagaatatgcacccttct
gccaacgctcagcctgggagagcattggtcatgactagaatggatagcatatcagactcc
cgtctttatgagagtaaccccatgcggcaaagaagacctccactgtgccgtgaacaacat
gctagctgggaccctttaccttgccccagggactcctataattaccactcgtacccactt
agtaatagtctcatgcagccatgctatgaaccagtcatggtaagaagcatgcctgagaag
atggaacagctctggagatctcctcactggccttctatggccagtgaccatagagagcaa
cacatcattccagagcatcagtatcagacttacaaaaacctgtgtaacatctttcctcca
ggggtggtactctctgtcatggagaagaacccacacttgaccgatgcccagcagcttgca
gcgattattgtttcaaggttacgatcaggtcaacaccactgttaa
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