Nanorana parkeri (Xizang Plateau frog): 108790517
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Entry
108790517 CDS
T04897
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108790517 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npr03021
]
108790517 (SMARCC2)
03036 Chromosome and associated proteins [BR:
npr03036
]
108790517 (SMARCC2)
Transcription machinery [BR:
npr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108790517 (SMARCC2)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108790517 (SMARCC2)
PBAF complex
108790517 (SMARCC2)
GBAF(ncBAF) complex
108790517 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
108790517
NCBI-ProteinID:
XP_018416289
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MAVRKKDGGPNVKFYESSDTISQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPMKCFLDFKVGGSLCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMNIEKSLVQNNCLSRPNIYLHPDIDSKLQSKLKDIVKRHQGTVTEDKSHASHVVVP
VPGNLEEEEWVRPILKRDKQVLLHWGYHPDSYDTWIPASEIEAPVEDAPTAEKPRKVHAK
WILDTDSFNEWMNEEDYEVNDDRNPVARRKKISAKTLTDEVSSPDSDRRDKKGPNYKKRK
RSPSPPPSAEAKKKNVKKGPSTPYTKSKRGHRDEEQEDLTKDMDEPSPVPNVEEVTLPKA
VNTKKDSETAPVKGGTVTDLDEQEDESMEAVTKEEDENSSGIKIEQVKTSDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQTSASQQMLNFPDKGKEKPSDLQNFGLRTDMYSKKNTTSKSKSAASATREW
TEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSEASLGPLAY
QPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVED
AAKITGKPDPSYGLESSGIAGTACEDNERIEMCVYNVIPVLYWNALLLEETTTEEPPPEP
QPAEEKKEPKDSPIEPVTEEDAKERGSDSVKKEEEKSKDDTDKDSEKSDVDMADGDKVSD
SKEGSEETDKEETAVKNKVERDIGEGNLSTAAASALAAAAVKAKHLAAVEERKIKSLVAL
LVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAELRARQQH
FQHIQNQHQQQHQTPGSQPVPPTAHSIPVTQASVTPASGGTASSSEGLSQPNPPPSQPPV
NSQQQGGTQPSPAHGSGSYTGQPPPNPMIPSAVSAPAQPPVPGNQHPSMPLPVPLIMSSD
LVDSAHHNPPTNTYPVPHPMHGSFPPAACRVGGPSPLPHNPSIALSSAPPNLPSSLGSAA
THSPAIVAAVQGGAPVTTSPVPDPATSLQPAESIGSTVPPAQQ
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcgggccgaacgtgaaattttatgagtcctctgacaca
atctctcagttcgacaacgtgcggctatggctggggaaaaactacaagaagtatattcag
gccgagcctcctactaacaagtccctgtcaagcctggtagtccagctcttacagtttcaa
gaagaggtgtttggaaaacatgtcagcaatgcaccgcttactaaattgccgatgaaatgc
ttcctagactttaaggtgggaggctctctgtgccatattcttgctgctgcttataaattc
aagagtgaccagggatggcgcaggtttgactttcagaacccatcccgtatggaccgcaat
gtggaaatgttcatgaacattgaaaagtcccttgtgcagaataactgtctgtcgcgaccc
aatatatatcttcatccggacatagactccaaactacagagcaagctgaaggacattgta
aaaagacatcagggtactgtaacggaggacaaaagtcatgcttcccatgtggtggttcca
gttcctggcaacttggaggaagaagaatgggtgcgacccatactgaagcgtgacaagcag
gttcttcttcattggggttaccatcctgacagttatgatacctggatccctgcaagcgaa
attgaagctccagtggaagatgcaccaaccgcagaaaagccacgcaaggtgcatgccaag
tggatcctagacactgactcatttaacgagtggatgaatgaagaagattatgaggtgaat
gatgatcgcaatcctgttgcacgtcgcaagaagatctcagccaagaccttgactgatgaa
gtaagcagtcctgactcggaccgcagggacaagaagggacctaattacaaaaagaggaaa
cgttccccatccccacccccaagtgcagaagcaaagaagaagaatgtcaaaaaaggaccc
tcaactccttacactaaatccaagaggggccaccgtgatgaggaacaagaggatctgaca
aaggacatggatgaaccttcgcctgttcctaatgtagaagaagtaactctgcccaaagct
gtcaacaccaagaaagattctgaaacagccccagtaaaaggaggcactgttactgacctt
gatgaacaagaagatgaaagtatggaagcagtgacaaaggaagaagatgagaactcttca
gggatcaaaattgaacaagtgaagacctctgaccttcatgaagacaatgtaactgaacaa
acacatcacattattatccccagctatgcggcctggtttgactataatagtgtacatgca
attgagcgccgagcactgcctgagtttttcaatggaaagaacaaatcaaaaacccctgag
atctatttggcatatcgaaacttcatgattgacacatatcgactgaatcctcaggaatac
ctcacttcaacggcatgccggcgcaacctggcaggggatgtttgcgctataatgagggtc
catgctttcttggaacaatggggattgattaattaccaagtggatgccgagagtcgtcct
acaccaatgggaccacctcccacttcacatttccatgtcttagctgacacaccatcagga
ctggtaccactgcagccaaaaacaccacagacctcagcctcacagcagatgctcaatttt
ccagacaaaggtaaagaaaaaccaagtgacctacaaaactttggcctaaggactgacatg
tatagcaagaagaatacaacttccaagagtaaatctgctgcaagtgccacacgggaatgg
actgagcaggagacgctgttactccttgaggctctagaaatgtacaaagatgactggaac
aaggtgtctgaacatgttggcagtcggactcaagatgaatgtattttacacttcctgcgg
ttacctattgaggatccatatttagagaactcggaagcatctcttggtcctttggcctat
caacctataccgtttagccagtctggcaaccctgtaatgagtactgtagccttcctggcc
tctgtcgtggatccacgtgtagcatctgctgcggccaaatcagccttagaggagttttct
aagatgaaggaggaggttcccacggcattagtagaagctcacgtccgaaaggtggaagat
gcagccaaaataactggcaaacctgacccaagttatggccttgagagcagtggcattgct
ggcactgcttgtgaagacaatgagcgaatagaaatgtgtgtttataatgtaattcctgta
ttatattggaatgctttgcttctagaggaaactactacagaggaacctcctcctgaacca
cagcccgcagaagagaagaaggaaccaaaggattcacctattgagcctgtcacagaagag
gacgcaaaggagcgtggtagtgattctgtaaagaaggaggaagagaagagcaaagatgac
acagacaaggactctgagaagagtgatgtagatatggctgatggggacaaagtatctgat
agtaaagaaggttcagaagaaacagataaggaggaaaccgcagtgaagaacaaggtggag
agagacatcggagaggggaacctctctacagctgcagcttctgccttggctgctgctgct
gtgaaggctaaacacctggctgcagtggaggaacgaaagatcaagtcattggtggctctg
ctggtggagactcaaatgaagaaactagagatcaaactgaggcactttgaggagctggag
accatcatggatagagaacgggaggcgctggagtatcagcggcagcagctcctagcagac
aggcagtccttccacatggaacagctaaaatacgcagagctgagagcacgtcaacagcac
ttccagcacattcagaatcaacaccagcagcaacatcagactcctggcagccagcctgtg
ccccccactgcccactccatccctgtaacacaagcttctgtgacccctgcatctgggggt
acagcaagcagttcggaagggctgagtcagccaaatccacctccatcacaaccaccagtg
aacagtcagcagcaaggaggcacacaacccagcccagcacacggttctggttcgtataca
ggccaaccaccacccaaccccatgatcccatcagcagtatctgctcctgcccagcctccg
gtgcccggtaatcagcaccccagcatgcctttgcctgtaccattaattatgagtagtgac
ttagttgactctgctcatcacaacccaccgactaacacctatccagtgccccatcccatg
catggctctttccctcctgcagcatgccgggtcggtgggccttccccactaccacataac
ccttccattgccctatcttcagcgcctcctaacttgccgtcttccctggggtcagcggcc
acacacagccctgcgatcgtagctgcagtgcagggaggggctcccgtcacaaccagtcct
gtaccagatcccgcaacatccctccagcctgcagaatccataggaagcacagtccctcca
gcccaacagtaa
DBGET
integrated database retrieval system
