Nanorana parkeri (Xizang Plateau frog): 108791066
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Entry
108791066 CDS
T04897
Symbol
SCAF8
Name
(RefSeq) protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npr03021
]
108791066 (SCAF8)
03041 Spliceosome [BR:
npr03041
]
108791066 (SCAF8)
Transcription machinery [BR:
npr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108791066 (SCAF8)
Spliceosome [BR:
npr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108791066 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
108791066
NCBI-ProteinID:
XP_018416945
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MEAVKTFNSELYSLNDYKPPISKAKMTQITKSAIKGIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQDKDVFAPRFSNNIINTFQNLYRCPTDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIHPPVVTPVFPSTAAAVGNTPGTPATPVTPANASQSMSDPWIA
QITSTDTLAAVAQILQSPQGQQLQHLVQSLHVQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAAATSTPMTPLEQSVSLSKKLMDRFDFGDDTAQNEEPKKEVSSIPLTSESVNNSLFHQ
LAEHLQQQNLEHLRHQFLEQQQQQQQQQQQQHTSKVALQETQDMMSESENSATPSQDDSQ
QAFLEKDLPHHNSQNIEEEDMDIDEIQDVTEEMFEKEEKKIVKDEKPRARSKSRSRSPRK
RRSRSRSGSRKRKHRKRSRSKSRERKRKTSRSYSSERRAREREKERQKKGLPPIRSKTLS
VCSTTLWVGQVDKKATQQDLTNVFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLS
AGSCKIGSKVIKIAWALNKGVKTEYKQLWDVDLGVTYIPWEKVKMDNLEDFSEGGMIDQE
TVNNDWSNQRTAEPTVTKEPISVPAPTTTVQSPVIPKSTNPPITAQTEAYTQPVAMLQIP
VAPTVPAVPAVPAVPAVSLVPPAFPVSMTVPPPGYTTLPPPPFMRAAFNPSQPPPGYISP
HVPPPSIPPPAISSAIPTALVPRLPISADAMKEVSYGNLMLPVGSGTTSAPTASVFNPAL
NTQAEQENKRQPTMENLTERSSNASLNTVVNSAGILTMQPQPPLTAPVPHLSMQGRIAGM
PFLDIRPGLLHQPARFALLTPAMPPLPPSRSMLPPALIDPTVHSLPFPPGDIFPHLNIPS
RLNSDNTPTQEESVPLPGSNIQQEGDQDYRFPPVENVGQSSESEHNEAIPATAAQENKGA
MSAEEIEVNARHAVDNHELQDMAVVDPSEGQDKLPECGAGYLSVEGSHETESKADARSLE
SLRASDHLSYESKLRNIPDSHDSELKPPLEGRLQFANSPVDILPPFGRHPLEMREMFNRP
PPDGRDHFGRPIPENHLGRLPMDSKDHYGQPILEGRNQFGRSPMDGREHFGRPPLDVRDH
FGRVPSDGGRREQIMFHPDKPWGHRGDFDERQHFPFTGFGGPKGFQDERHRHGNYRHEPR
NAPGWNRGFEPEANRDLDERRRPWERQRDRDDREFGFRREMNGNRFGRERPSSNWMPPHS
QMFECFAEANATNQKEDKVPQVNGDLPETGGQTQTAKNANDPELCEKKSSGKVTEEKDTK
DAEVESQQMVESTETEGT
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaaacctttaacagcgagttgtactcgctcaatgattacaaacctccc
atctccaaggccaaaatgacacagatcaccaagtctgcaattaaaggcataaagttttac
aagcatgttgttcaaagtgttgagaagtttatacaaaagtgcaaaccagaatacaaagtt
cctggactgtatgttattgactccattgttcgacaatctagacatcagtttggtcaagat
aaggatgtttttgcaccaaggttcagcaataacataatcaacactttccagaacttatat
cgatgtcctacagatgacaagagcaagattgtaagagtattgaatctgtggcagaaaaac
aatgttttcaagagtgaaattatccaacctcttcttgatatggctgctggtattcatccc
cctgttgtcacacccgtctttcctagtactgctgcagctgttggcaatacacctgggaca
ccagctaccccggttactcccgcaaatgcatctcaaagcatgtctgacccatggattgcc
caaataaccagtacagacaccctcgctgcagtagctcagatattacaaagccctcaggga
caacagcttcagcatctggttcagtctttacatgtacagcaacaaaagccccagccttca
cttctccaggcactagatgctggacttgtggttcagctgcaagcactcactgctcaactt
acagctgctgctgccacatcaacccccatgaccccgttggagcaaagtgtatccctcagc
aagaaattaatggacaggtttgattttggggatgacactgcccagaatgaagagccaaaa
aaggaggtctcatcaatccctcttacatcggagtctgtgaataattcccttttccatcaa
ctggcggaacatttacagcaacaaaatctggaacatctccgccaccaattcttggagcag
cagcagcagcaacaacagcagcagcagcaacagcatacttcaaaggtggctcttcaggaa
acccaggacatgatgtctgaatcagaaaactctgctacaccatcccaggatgacagccag
caagcatttttagagaaagatctgccacatcataattcacaaaatatagaggaagaggat
atggatattgacgaaatacaagatgtaactgaggagatgtttgaaaaggaagaaaagaag
attgtaaaagatgaaaagccgagggcacgttctaaatcacgatcaagatcacctaggaaa
agacgttcaagatcccgatctggatcaagaaagcgcaagcacagaaaacgttctcgctcc
aagtcaagggaaagaaagcgaaagacctcgcgctcctactcaagtgagagaagagctcga
gaacgagaaaaagaacgtcagaaaaagggtctgcctcctattcggtccaaaactctcagt
gtgtgcagtactacactctgggttggacaggttgacaaaaaggcaacacaacaagatttg
accaatgtgtttgaagagtttggacagattgaatctattaatatgattccacctcgaggt
tgtgcctatgtctgtatggttcacagacaagatgcattcagagctcttcagaagcttagc
gctggctcttgtaagatcggatcgaaagtcattaagattgcttgggcgttaaataaaggc
gtaaaaacagagtacaagcagctctgggatgttgatcttggagtgacatatattccttgg
gaaaaagtgaaaatggataatctagaagatttttccgaaggtggaatgattgatcaagaa
actgttaataatgactggtcaaatcaaagaactgcagaacctactgtaactaaggagcca
atttctgtaccagctcccactactactgtacagagtccagtgattccaaaatccaccaat
ccaccaataacagcgcaaacagaggcctatacccagccagttgcaatgctgcagattcca
gttgcaccaactgtccccgctgttcctgctgtccccgctgttcctgctgtaagtttggta
ccacctgcattccctgtctccatgacggttccccctccgggctacaccactcttcctcca
cctccattcatgcgtgcagctttcaacccttcacagccaccaccaggttatatttcacca
catgtgccaccaccttccatccctcctcccgcaattagctcagctatcccaacagcacta
gttccacgactgcccatctctgcagatgcaatgaaagaggtttcatatggcaacctgatg
ttacctgttggatcaggaaccacttcagcgcccacggcatctgtgtttaacccagcttta
aatacacaagcagagcaagaaaataaaagacaacccactatggaaaacctcacagaaaga
tcttcaaatgcctctctaaacactgtggtgaacagtgctgggatcttgacaatgcagcca
caaccccctctcacggcacctgttcctcatttgagcatgcaaggtagaattgcaggaatg
cccttcctagatattcgtcccggattactgcaccaaccggcaagatttgctttattaact
cctgcaatgccacctctaccaccatcaaggagcatgcttccaccagctcttattgaccct
actgtgcattctcttcctttcccgccaggggatattttccctcatctaaatattccaagt
agactgaattctgataacactcctactcaagaagaaagtgtacctttgccgggcagtaac
attcaacaagaaggagaccaggattaccgttttccaccagtagaaaatgtcgggcagtcg
tctgaaagtgaacataatgaagctataccagccacagctgcccaagaaaataaaggtgcg
atgtctgcagaggaaattgaggttaatgctagacatgcagtagataatcatgagctacag
gacatggctgttgtagatccttctgagggacaggataaacttcctgaatgtggtgctggg
tacttatctgtggaaggttcccatgaaactgagagcaaagctgatgcacggtctcttgaa
agtcttagagcatctgatcacctttcttatgaaagtaagctaagaaatatccccgattct
catgacagtgaattgaaaccaccattagaaggtaggctgcaattcgcaaactccccagta
gatatattaccaccatttgggagacatccattggagatgagagaaatgtttaacaggcca
ccaccagatggacgtgatcattttggtagacctattccagagaatcaccttgggagacta
cccatggatagtaaagatcattatggacaacctatactagagggcagaaatcagtttgga
aggtcaccaatggatgggagagaacattttggaagacctcccctggatgtaagggatcat
tttggaagagtaccttcagatggtggtagaagggagcaaataatgtttcacccagataag
ccatggggacatagaggtgattttgatgaaagacaacactttcctttcactggttttggt
ggtccaaagggctttcaagatgaaagacatcgccatggcaactatagacatgagcctagg
aatgcgccgggttggaacagaggatttgaaccagaggctaacagagatttggatgaacgt
cgacgcccttgggagagacagagagatagagatgatcgagaattcggttttcgacgagaa
atgaatggcaaccgctttggaagggagaggccgtccagcaactggatgcctcctcactca
caaatgtttgaatgttttgcagaagccaacgctactaaccagaaagaggataaagtgcct
caggttaatggagatctgccagagactggcggtcaaacacaaactgctaaaaacgcaaat
gatcctgaactttgtgagaaaaaatcatcaggcaaagtaactgaagagaaggataccaag
gatgctgaagtagaaagtcaacaaatggttgaaagcacagaaactgaggggacataa
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