Nanorana parkeri (Xizang Plateau frog): 108791472
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Entry
108791472 CDS
T04897
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npr03016
]
108791472 (TRMT13)
Enzymes [BR:
npr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
108791472 (TRMT13)
Transfer RNA biogenesis [BR:
npr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108791472 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Tropomodulin
Motif
Other DBs
NCBI-GeneID:
108791472
NCBI-ProteinID:
XP_018417472
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MELNEFQVVTEGETRNAAGPLPGRCGYFVQRKRRYCKMIVSEGKKFCGEHAENGEETSRR
RIPCPLDPKHTVYEDQLQKHIKKCNSREKPQPVFYVQNINSGTVDLDTGEEQVSLSSLSK
EELQKLTETLLRVTSDLDPPLPDGKLCHSALQEALNDPTNGDTACKHLKQQASILGHLDR
LGLLGTSRCFVEFGAGRGKLSHWVNIALENDDDVHFLLVERATTRFKVDGKQKKSTFERL
HIDIQHLSLDRVPSLVQKRLPVIGIGKHLCGAGTDLALRCLVQNYSNLVRGSQCKRLKID
TGELTDNIEDKSANTCPVEGIVIALCCHHRCDWHHYVGRDFFQKLGLGQREFGLFQRMSS
WATCGSRTPGQVLNSSEKTELVETEEHDIEEHNIDLKNPDCDSEGVEGLALTVEERENLG
RLCKLLLNHGRLDYLNSMGYTSSLEYYTEPEVSLENVLLIAVPQLQSTHY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggagttaaatgagtttcaagtggtgactgagggggagactaggaatgctgccggcccc
ctgccagggagatgtggctattttgtgcagaggaagagaagatattgcaagatgatcgtg
tcagaagggaagaagttctgtggtgagcatgcagagaatggggaggaaacaagcagaaga
agaattccctgtcctctggaccccaaacacacagtgtatgaggaccagctgcaaaaacac
attaagaaatgcaattccagggagaagccccaaccagtcttttatgtgcaaaacatcaat
tcaggcactgtagatctagacaccggcgaggaacaggtgagcctcagttccttgtccaaa
gaagaactgcagaaacttacagaaacactactaagggtcaccagtgatctggatccacca
ctgccagacgggaaattatgtcactctgcattacaagaagcattgaatgacccaacaaat
ggagacactgcctgcaagcatctcaaacaacaggcctctattttgggtcatttggatagg
ttgggtctgttgggcacttctcgctgctttgtagagtttggagcaggccgagggaagtta
tcccattgggtgaacattgccttagaaaatgatgacgacgtccacttcctactggtagag
agagccaccactaggtttaaggtggatgggaagcagaaaaagtctacttttgagagacta
catattgacatccagcacctttctttagatcgagtccccagccttgttcagaaaaggctg
ccggttattggaattggaaaacacctctgtggagctggcacagatttggctcttcgctgc
cttgtgcaaaattactctaatctagtgagaggatcacagtgtaagcgcctcaagatcgat
actggagaacttacagacaacatagaagacaaatcagcaaacacttgtcccgttgaaggg
attgttattgccctttgttgtcaccaccgttgtgactggcaccactatgtgggcagagat
ttcttccagaagctggggctaggacagagggaatttggactttttcagcgcatgtctagc
tgggcaacgtgtggttccaggacaccggggcaggttttaaactcgagcgagaaaacagaa
cttgtagagacagaagagcatgacatagaagaacataacatagatctgaaaaacccagac
tgcgattcagagggagtagaagggctggctctgactgttgaggagagagagaatttagga
cgtctttgcaaactgctcctaaatcatggacgtcttgattacttgaatagtatgggctac
acctctagccttgaatactatacagagccagaagtgtctttggagaatgtcctgttgata
gcagtacctcaattgcaaagcacacattattaa
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