Nanorana parkeri (Xizang Plateau frog): 108791497
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Entry
108791497 CDS
T04897
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04140
Autophagy - animal
npr04148
Efferocytosis
npr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108791497
04148 Efferocytosis
108791497
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108791497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npr04131
]
108791497
Membrane trafficking [BR:
npr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108791497
Hops complex
108791497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
KDZ
Motif
Other DBs
NCBI-GeneID:
108791497
NCBI-ProteinID:
XP_018417505
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MDFCTANWYPLGDVYYRKLNLYDMGWNIREEFKDCLVAVGPYGGSIALMKNYVTKDKPSS
SRPVLEIYSASGVLLSTIAWKSGQVVHLGWTVSEDLICIQEDGTVLIYDIFCVFQRTFTM
GSEIKQNQVLEAKVFHSEYRTGIAVLTGALKFTFTSNIDGVKLRRMPEIPNPKVVPSCWT
VLLQDRMTLILLAIGKDLYLLDSTACSVITLPGMSPLSGAYLNFSVSFNHKYLAAFTDSG
YIWMGMSSLKEKLWEFTSDIRQAPKQMAWSIRPQSKQIAVVVMWDKLLLVAGKGKDGIQF
PLDEETFMVPELDGVRLISHSTHEFLHEIPKTTEEIFKIASMAPGALLMEAQKEYEKRSQ
KADDYLREIKDQNLLSVAVAKCIEAAGYEHTPEMQKSLLRVSSAKTYFDYM
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggatttctgtactgctaactggtaccctctgggggacgtctattaccggaaattgaat
ttatatgatatgggatggaatatcagagaagaatttaaagattgtcttgtggcagttggt
ccctatggaggatcgatagccttgatgaaaaactatgtgacaaaagataaaccaagcagt
tcacgtcctgtcttggaaatctactcagcgtctggtgttcttttatctacaattgcgtgg
aagagtggacaggtggtgcacctaggatggacagtctcggaagatctaatctgtattcag
gaagatggaactgtgttaatatatgacatattttgtgtatttcaacgtacttttaccatg
ggaagtgaaattaagcagaaccaggttctggaagccaaggtatttcattctgaatacaga
actggaattgcagtattaacaggagcgttgaagtttactttcacgtccaatattgatgga
gtaaaactgcgcaggatgccagaaatcccaaatcctaaagtggtgccatcttgttggact
gttcttttgcaggacaggatgacattaattttgttagccataggcaaagatttgtacttg
ctggacagcacagcatgctctgttataactcttcctggaatgagcccattgtctggagcg
tatcttaatttttctgtctcctttaatcataaatatcttgcagcctttacagacagtgga
tatatatggatgggaatgtcttcactcaaggaaaaactttgggagtttacttcagacatt
cgacaagcacccaagcaaatggcctggagcatcaggccacaaagtaaacaaattgcagtt
gtagtaatgtgggacaaactgcttcttgtggctggaaaaggcaaagatggcatacaattt
ccattggatgaggaaactttcatggttccagagcttgatggtgtcagacttatttctcat
tccacacatgagtttcttcatgagataccaaagacaactgaagagattttcaagatagct
tcaatggccccaggtgcacttctaatggaagcacaaaaggaatatgagaaacggagccag
aaggctgatgactatctgcgtgaaataaaggatcaaaacctgctttctgtagcagtggca
aagtgcattgaagcagctggttatgagcataccccagaaatgcaaaaatctttgcttaga
gtaagttctgctaaaacatattttgattacatgtag
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