Nanorana parkeri (Xizang Plateau frog): 108791660
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Entry
108791660 CDS
T04897
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03020
RNA polymerase
npr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108791660 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
108791660 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npr03021
]
108791660 (POLR2B)
03400 DNA repair and recombination proteins [BR:
npr03400
]
108791660 (POLR2B)
Enzymes [BR:
npr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108791660 (POLR2B)
Transcription machinery [BR:
npr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108791660 (POLR2B)
DNA repair and recombination proteins [BR:
npr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108791660 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
108791660
NCBI-ProteinID:
XP_018417703
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQIQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSSIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VNIFYILSIDCCPNLLCQLQFSPILFRCGCAPPSLCGAKTVISLLLEGVSAFESLAFLVA
IASDTGPALFVEEYTPYCLLPEACHQGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSD
FCETKKAYFLGYMVHRLLLSALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEV
RIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTF
ASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVG
SQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMD
IIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQD
LVASGVVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPD
HNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAG
INSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPIRE
TCQGMRHAIYEKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTF
LRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMP
FTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLL
SDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPM
EGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTY
ECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatgcggacgaagatatgcaatatgatgaggatgatgacgaaataactccagat
ctgtggcaggaagcatgttggattgtcataagttcttactttgatgagaaaggcttggtg
cgtcagcagcttgattcttttgatgagttcattcagatgtctgtgcagagaattgtggaa
gatgccccacctattgacttgcaggctgaagctcagcacgctactggagaagtggaagag
ccaccaagataccttctgaagtttgaacagatatatctgtctaaacctacacactgggag
agagatggcgctccttctcctatgatgccaaatgaagccagactaagaaatttaacgtat
tctgcccctctctacgttgatattacaaagacagtcataaaagaaggggaagaacagatt
caaactcagcatcagaaaacctttattggaaaaataccaataatgttgcgttctacatac
tgcctcttgaatggccttactgaccgtgatctctgcgagttaaatgaatgtccactagac
ccagggggttactttatcattaatgggtctgagaaggttttaatcgctcaagaaaaaatg
gccacaaacactgtatatgtctttgcgaagaaagattctaagtatgcttatactgccgag
tgtcggtcttgcttggagaattcttcaagaccaacaagttctatatgggtcagcatgttg
gcacggggaggtcagggagccaaaaaaagtgccattggtcaacgtattgttgcaacatta
ccttatatcaaacaagaagtgcccattattattgtgtttagagcactggggtttgtatct
gacagagatatattggaacacattatctatgactttgaagatcctgagatgatggaaatg
gtaaatattttttatatactttctattgactgttgccctaatctcctctgtcagctccag
ttttctccaatcttatttaggtgtggatgtgccccgccaagtctttgtggtgccaaaacg
gttatcagtttgctactggagggagtttccgcttttgaatctctggcctttttggtggcc
attgcctctgacacaggtcccgccctctttgtggaggagtatactccttactgcttgtta
ccggaggcttgtcaccagggttccaggggagcaaagcctggcgtcacaaaagaaaaaaga
atcaaatatgcaaaagaagttcttcagaaagaaatgcttcctcacgttggtgtcagtgac
ttttgcgagactaaaaaagcctactttttggggtacatggttcatcgactacttctttct
gctttgggaaggagagagcttgatgaccgagatcactacggaaacaaaagactggatctt
gctggacctctgcttgcatttctcttcagaggaatgtttaaaaacttgctaaaagaagta
aggatctatgcgcagaaattcattgatcgaggaaaagactttaatttggaactggcaatt
aagactcgaataatttcagatggcttaaagtactctttggctactggaaattggggagac
caaaagaaagcacatcaagctagagctggtgtatcacaggtgttgaacagattgacattt
gcctctactctttcacacttgcggagattaaattcccctataggcagagatggtaaactt
gccaaaccaagacagttacataacaccttatggggaatggtgtgccctgctgaaactcct
gagggtcatgctgtgggccttgtaaagaatcttgctttaatggcttatatatctgtggga
tctcagccttcaccaatattggagttcttggaagagtggagcatggaaaaccttgaagaa
atatcccctgctgccattgcagatgctacaaaaatatttgtgaacggatgctgggttgga
atacacaaggatccagaacagctgatgaatacacttcggaaattgcggcgtcaaatggac
atcattgtttcagaggtctcaatgataagggatataagggaaagagaaataagaatttac
acagatgcaggaaggatttgtcgtccactacttattgtagaaaaacaaaaattgttgctt
aaaagaagacacattgaccagctaaaagagagggagtacaataattatagttggcaggac
ctggtggctagtggagttgtggaatacattgatacacttgaagaggagaccgttatgctt
gcgatgacacctgatgatttgcaagaaaagggtgttgcttattgttcaacatacacacat
tgtgaaattcatccatctatgattttaggagtctgtgcttcaattataccctttcctgac
cacaaccagtctcctaggaacacctaccagtctgctatgggaaaacaagctatgggtgtc
tatattaccaattttcatgttcgcatggatactttagcacatgtgctgtattaccctcaa
aaacctttggttactacgcggtccatggagtacctgcgtttcagagaactccctgctggc
atcaattctattgttgctattgcatcttatactggatataaccaggaggattctgtcatc
atgaaccgctctgctgtggatagaggttttttcagatctgtcttctaccgttcctataaa
gaacaggagtccaaaaaaggatttgatcaagaagaaatttttgagaaacctatccgtgaa
acctgtcaaggcatgcgacatgcaatttatgagaaattggacgatgatggtttaattgca
cctggtgtcagggtctctggggatgatgtaatcattggcaaaactgtaacattgcctgaa
aatgaggatgagcttgaaagcacaaatcgtcggtacaccaagagggattgtagcactttt
cttcgtacaagtgaaactggcattgttgatcaggtcatggtaacacttaaccaggaaggc
tacaagttttgcaagatcagggtacggtctgttcgaatccctcagattggagataagttt
gctagtcgacacggacagaagggtacctgtggaattcagtacaggcaggaggatatgcct
tttacttgtgaaggtattaccccagatattatcatcaacccccatgctatcccttctcgt
atgacaattggacacttgattgaatgtctccaagggaaggtgtcggcaaataagggggag
attggtgatgctactccattcaatgatgccgtaaatgtgcagaagatttcaaatttgtta
tcggactatgggtatcatcttcgaggaaatgaggttctgtacaatggattcactggtcgt
aagatcacatcacaaatttttattggacctacttactatcagagattaaagcacatggta
gatgataagattcattcccgtgcaagaggccctattcagattttaaacagacagccaatg
gaaggtagatcacgtgatggaggtcttcggtttggagaaatggaacgggactgtcaaata
gcccatggtgccgcacagtttcttcgtgaaagattgtttgaagcttctgacccttaccaa
gtgcatgtttgtaatctctgtggattgatggcaattgcaaacaccagaactcacacctat
gaatgcagaggatgccgaaacaaaacacaaatatcccttgtccggatgccttatgcctgc
aaacttctttttcaggagcttatgtcgatgagtattgctccacgcatgatgacatcctag
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integrated database retrieval system
