Nanorana parkeri (Xizang Plateau frog): 108791966
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Entry
108791966 CDS
T04897
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04137
Mitophagy - animal
npr04140
Autophagy - animal
npr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108791966 (HIF1A)
04137 Mitophagy - animal
108791966 (HIF1A)
04148 Efferocytosis
108791966 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npr03000
]
108791966 (HIF1A)
Transcription factors [BR:
npr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108791966 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
108791966
NCBI-ProteinID:
XP_018418121
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MEGAVVTDKKRISSERRKEKSRDAARCRRSKESEVFYELSHQLPLPHNVSSHLDKASIMR
LAISYLRLRRLLDAGEAAGESDMEKQLNCFYLKALEGFVLVLTEEGDMIYLSENVNKCMG
LTQFELTGHSVFDFTHPCDHEELRETLTFRNGPAKKGKEQITERSFFLRMKCTLTSRGRT
VNIKSATWKVLHCTGHMRVYDNCNNQSHCGYKKPPMTCMVLICEPIPHPSNIEFPLDSKT
FLSRHSLDMKFSYCDERVTELAGYEPDELLGRSVYEYYHALDSDHLTKAHHDMFTKGQVT
TGQYRLLAKKGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVENELVLSLGQTESTE
SAEIKMPQIFTKLDVEEDTESLFDKLKKEPESLTVLAPDAGDEIIALDFSSSDSEPQFDD
VPLYNDVMMHPTSKPPENLVSPLPALEKPKPMRSNADPALNREVVIKMETSPQQLALAFT
IPQLSKPSSPTEISSSQSSTEPGTPAEYCFDVDSEISREFKMDLVEKLFAIDTEAKTPFC
TQETDLDLEMLAPYIPMDDDFQLRSFDQLSSMETDSTHPQSLESMTNLFQPSTAPPITDL
KAIATEAMSDLETIIVHSPTPPNKKVLSAPASPYNANRSRTSSPVRTEKAAEKDRSRPGT
PNLTSSLNKRPAPMDDEMSPKMIALHNVQRKRKIENDGPLFQAVGLGTLFQTNVNPGPNS
PLLWKCVKVSDSDKPTGPEQRTILLLSTDMASRLLGQSLDGTRLPQLTSYDCEVNAPIQG
SRNLLQGEELLRALDQSN
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcagtagtgacagacaagaaaaggatcagttcggagcggcggaaggagaaa
tctcgggatgctgcaaggtgtcggaggagtaaagaatcggaggtcttttatgaactgtcc
caccagctgccgctgcctcacaatgtcagctctcatcttgataaagcctccataatgagg
ctcgccatcagctacctgcgtctaagaaggctcctcgatgcaggtgaagcagctggagag
tctgacatggaaaaacagctgaattgtttttatctaaaggccttagagggatttgttttg
gtcctgactgaggaaggggatatgatctacctgtctgaaaatgtcaacaagtgcatggga
ctcacacagtttgagctgactgggcacagtgtgttcgacttcacccacccctgtgatcat
gaggagctgagggagacgctgacatttagaaatggaccagcaaagaagggtaaagagcaa
atcacagagcgcagcttcttcctgcgtatgaagtgcaccctcacaagccgggggagaacc
gtaaatatcaagtctgccacgtggaaggttcttcactgcacagggcacatgcgtgtgtat
gacaactgcaacaaccagagccattgcggatataagaagccacccatgacctgcatggtg
ctgatctgcgaacctatccctcacccatcaaatattgaatttccattggacagtaaaacc
ttcctgagccgccacagccttgacatgaagttctcttattgtgacgaaagagttacagag
ctggcaggatatgagccagatgaactcctgggaaggtcagtgtatgagtattatcacgcc
ctggactctgaccacctgaccaaagcacaccatgacatgttcaccaaagggcaggtgaca
acaggacagtacaggctgctggccaagaaaggtggctatgtctgggtggagacacaggcc
acggttatatacaatacaaagaactcccagccccagtgtattgtgtgcgtgaactatgtc
ctcagtggcattgtggagaacgagctggtcttatcccttggccagacagagtccacagaa
tctgctgaaataaagatgccgcagatcttcactaaactggatgtggaggaggacacggaa
agcctgtttgacaaactgaaaaaggagccggagtcactgactgttcttgcacctgatgct
ggagatgagatcatagccttggacttcagttccagtgattcagagccgcagtttgacgat
gtcccactgtataatgacgtcatgatgcacccaaccagtaagcctccagaaaacctggtg
tctccgcttccagcgttagagaagccgaagcctatgcgtagcaatgccgaccctgctctg
aacagggaggtggtgatcaagatggagactagcccacaacagctggcactggcttttacc
attccacagctctccaagccatctagtccaacagaaatcagcagcagccagagctcaacg
gagcctggcactccagcagaatattgtttcgatgtggatagtgagatctcccgggaattt
aagatggacttggttgagaaactttttgccattgacacagaagcaaagactccattctgt
acacaggaaacagacttggacctggaaatgttggctccatatatcccaatggacgatgac
ttccagctaagaagctttgaccagctttcctccatggagactgattccactcatccgcag
tcactagaaagcatgaccaatctgttccagccatctactgctccacccattaccgatctg
aaagcaatcgccactgaagccatgagcgatttggaaaccatcattgtgcactcgcctaca
ccacccaataaaaaggtgctaagtgcccccgcttccccatataatgcaaaccgaagtcgg
acaagttctcccgtgaggacagagaaagcagccgaaaaggacagatcccgccctggaact
cccaatttaacgagttcgctaaataaaagacctgcacccatggatgacgaaatgagccca
aagatgatcgctttacataatgtccagagaaaacgcaaaattgaaaacgatgggcctttg
tttcaagcagtgggactaggaacgttattccaaacgaatgttaatccagggcctaactct
cctctgttatggaaatgtgtcaaagtgtcagactctgataagccaactggccctgaacaa
cgaacaatcctcttattgtctacagatatggccagtcgattgcttggacagtcgttggat
ggcaccaggcttcctcagctaactagctacgactgcgaagtgaacgccccgatacaagga
agccggaacctgctgcagggcgaggaattattaagagccctcgatcaaagcaactga
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