Nanorana parkeri (Xizang Plateau frog): 108792010
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Entry
108792010 CDS
T04897
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npr03036
]
108792010 (DDX4)
Enzymes [BR:
npr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108792010 (DDX4)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108792010 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SNF2-rel_dom
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108792010
NCBI-ProteinID:
XP_018418178
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MSGEEDWENEIDNAPACVPNFSNLEPAFQERNQNNYSSNNDFNQNFGSTESAFGNRKGSD
YNQDLKSSETGFGNRRGRGRGGYGMFNKDLDSNDNQESGGFSNKENGSFGDGPKRGGFQR
GGGFNDDSSGSGRGRRGGRGGSAFSGFGSGNANQQTGFTSHDGFQNETSSFGRGRRGGRG
GSFSGERDGGRGRGFGRGGFRGRNEEVGVESGKGAEEFESSNQAPKVTYIPPPPPEEEAD
IFKHYQSGINFDKYDDIVVDVSGSDAPPAILTFEEASLPGTLTKNVEKAGYVKLTPIQKH
SIPIILASRDLMACAQTGSGKTAAFLLPILAHMMVKGVESSSFQLLKEPEAIIIAPTREL
INQIYLDARKFAYGTCIRPVVIYGGTQTGHSLRQISQGCNILCATPGRLLDIIKKEKIGL
SKIRFLVLDEADRMLDMGFKEDIETLLHSPGMPSTENRQTLMFSATFPTQIQRLAREILK
PDYLFVVVGQVGGACSDVEQQVIEVEEYGKKDKLMEILQEIGHERTMVFVKTKKKADFIA
AFLCQEKVPSTSIHGDREQREREIALNDFRTGQCPVIVATSVAARGLDIENVRHVINFDI
PDDIDEYVHRIGRTGRCGNTGRAISFFNRKGNDEQNIARSLVKVLSDAHQEVPAWLEEIA
FSAHGMPAYNPRSNTFASTDDRKRGDTRQDSSTSGFSPSVAQAEDEDWG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgaagaggattgggagaatgaaattgataacgcacctgcctgtgttccaaac
ttcagcaacttggagccagcattccaggagcgcaatcaaaataattattcatccaacaat
gatttcaatcaaaactttggatcaaccgagagtgcttttggaaacagaaaaggtagtgac
tacaaccaagatttgaagtcttcggaaacaggatttggaaaccgaagaggtagaggtcga
ggtggatatggcatgttcaacaaagatttggattctaatgataaccaggagagtggagga
ttttctaataaagaaaatgggtcatttggcgatggtcctaagcgcggtggttttcagaga
ggaggtggttttaatgatgattcatctggttctggaagaggacggaggggtggtagagga
ggttctgcattttctggatttggtagcggaaatgcaaatcagcagacaggttttactagc
catgatggttttcaaaatgaaacttctagttttggaaggggaaggcgaggtggaagaggt
ggttctttttctggtgaacgagacggtggcaggggaagaggttttggaaggggtggcttt
agaggaaggaatgaagaagtgggggtggagtcgggtaaaggggcagaggaatttgaaagt
tctaatcaagcgccgaaggtgacatatattccccctccgccaccagaagaggaagccgat
atctttaaacattaccagtctggcattaactttgacaaatatgatgacattgtggttgac
gtctctggaagtgatgctccaccagcaatactgactttcgaagaagccagtcttcctggt
acactaacaaaaaatgttgagaaagctggatatgtaaaattgactcctatacagaaacat
agtattcctattatactggctagtcgtgatttaatggcttgtgcacagacaggatctgga
aaaacggctgcttttcttttgccgattttggctcacatgatggttaaaggtgttgaatct
agttcgtttcaactgcttaaagagccagaagcaattattattgctcctacaagagaactg
atcaatcagatctatctagatgcccgtaaatttgcatacggaacatgtattcgcccagtt
gtgatttatggaggaacacagacagggcactcattaagacagatctctcaaggatgcaac
attctctgtgcaacccctggaagattattggatatcatcaagaaggagaagattggttta
agtaagatacgcttccttgtgttggatgaagctgatcgtatgttggatatgggctttaag
gaagacattgaaactttgttgcacagtcctggaatgccgagtacagaaaacagacaaaca
ctcatgttcagtgctacttttcctacacaaatacagcgccttgccagagaaattctgaag
ccagattacttatttgttgtggttggccaagttggtggtgcttgcagtgatgtggaacag
caggtcattgaagttgaggaatatggaaagaaagacaagttgatggaaatcctacaggag
ataggccatgagcgaacaatggtgtttgtgaaaactaagaagaaagcagatttcattgct
gcatttctctgtcaggaaaaagtcccatcaaccagtattcatggtgaccgggaacaaaga
gagcgagagatagccttaaacgattttaggacaggacagtgtcccgtaattgttgccact
tcggttgctgccagaggattggacattgaaaatgtccgtcatgtcatcaattttgatata
ccagatgatatcgatgaatatgttcatagaattggacgtactggacggtgtggcaataca
ggaagagcaatctcgttttttaatagaaagggcaacgatgaacaaaatattgctcgttca
cttgtgaaagtcttaagtgatgcacatcaagaagtacctgcttggcttgaagagatcgca
tttagtgcccacgggatgcctgcctataatccacgatcaaatacgtttgcatctacagat
gacagaaagagaggagacactaggcaagattccagcacttcaggattttccccttctgtg
gctcaggcagaagatgaggattggggataa
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