KEGG   Nanorana parkeri (Xizang Plateau frog): 108792260
Entry
108792260         CDS       T04897                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:npr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:npr03041]
    108792260 (SMU1)
Spliceosome [BR:npr03041]
 Complex B
  Other components
   Complex B specific factors
    108792260 (SMU1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd LisH_TPL WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_TEP1_C Beta-prop_Vps41 Ge1_WD40 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_VPS8 Beta-prop_IP5PC_F DUF7165 TFIIIC_delta VPS8_N KNTC1_N LisH Beta-prop_NOL10_N LisH_PAC1 PROPPIN LisH_WDR26 PA14 zf_topless
Other DBs
NCBI-GeneID: 108792260
NCBI-ProteinID: XP_018418500
LinkDB
Position
Unknown
AA seq 513 aa
MSIEIESSDVIRLIMQYLKENNLHRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKMWNMKTTECANTFKSLGSTAGTDITVNSVVLLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtccatcgagattgagtcctccgatgtcatacgtcttattatgcaatacctaaaagaa
aataatttgcatcgtacattggctacattgcaagaggaaactacggtgtctttaaacact
gtggacagtattgagagttttgtggcggacattaacagtgggcattgggatactgtcctg
caagccatacagtcacttaagctgccagacaagacactcattgatctctatgaacaggtt
gtattggaattgattgaacttcgtgaattgggagctgccagatctctcctgagacagact
gatcccatgatcatgttgaaacagacccagccagaaagatacattcacttggaaaacctc
ttggctagatcatattttgacccacgtgaggcttatcccgatggcagcagcaaagaaaaa
agaagagcagcaatagctcaggcccttgctggagaagtgagtgttgtgcctccatcacgt
ctcatggcgctcttgggacaggcattaaaatggcaacaacatcagggacttctgccccca
ggaatgactattgatttgtttagaggtaaagcagcagtgaaagatgtggaagaggagaaa
ttccccactcagctgagtaggcacatcaagtttggtcagaaatcacatgtggaatgtgct
cgcttttcacccgatggtcagtatttggttacaggatctgttgatgggtttattgaggtt
tggaactttacaacaggaaagatcagaaaggatttgaaatatcaggctcaagataacttc
atgatgatggatgacgctgtattgtgcatgtgctttagcagggatactgaaatgttggct
acaggagcacaagatggaaaaattaaggtgtggaagattcagagtgggcagtgtttgagg
aggtttgaacgtgcacacagtaaaggtgtcacatgccttagtttctctaaagacagcagt
cagatcctcagtgcttcatttgaccagacgatcagaatccatggcttgaaatctggtaaa
acacttaaagaattcagaggacattcctcgtttgtgaatgaggccacttttacacaggat
ggtcactatataattagtgcatcatctgatggcaccgtaaagatgtggaatatgaagact
acagagtgtgccaataccttcaagtcccttggaagcactgcaggaacagacattacagtt
aacagtgtcgttctgttgccaaaaaatccagagcactttgttgtgtgtaatcgctcgaac
acagttgtgattatgaatatgcaaggacaaattgttaggagcttcagctctggtaagaga
gaaggtggtgactttgtgtgctgtacactatcacccagaggagagtggatctactgtgtt
ggagaggattttgtgctatattgtttcagcactgtaactggcaagctggaaagaaccttg
actgtccatgagaaggatgtaatcggaattgcacatcatcctcatcagaatttaattggc
acctatagtgaagacggacttctgaaactgtggaaaccttag

DBGET integrated database retrieval system