Nanorana parkeri (Xizang Plateau frog): 108792440
Help
Entry
108792440 CDS
T04897
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03440
Homologous recombination
npr03450
Non-homologous end-joining
npr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108792440 (RAD50)
03450 Non-homologous end-joining
108792440 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108792440 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npr03032
]
108792440 (RAD50)
03400 DNA repair and recombination proteins [BR:
npr03400
]
108792440 (RAD50)
DNA replication proteins [BR:
npr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
108792440 (RAD50)
DNA repair and recombination proteins [BR:
npr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
108792440 (RAD50)
BRCA1-C complex
108792440 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
108792440 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
AAA_29
AAA_13
AAA_22
Motif
Other DBs
NCBI-GeneID:
108792440
NCBI-ProteinID:
XP_018418728
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQVITFFKPLTILVGPNGAGKTTIIECLKYITTGDFPPG
SKGNTFVHDPKVAHETDVRAQIRLQLRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR
MKHGEKVSLSTKCAEMDREMISALGVSTAVLNNVIFCHQEDSNWPLSEGRQLKIKFDEIF
SATRYIKALDTLRQVRQKQGQRVKECQAELKYLKQNKEKAREIQDMLRSKEAQLAASKEN
VKSIDNQLEPLKSRLTEVQRNLSKVMKLDNDIKALESRKKNMEKDNKDLEDKIEKIFQGT
DEELNEMYHNHQKTVRDKERKLNDYQRELDRVVKDCQRLNREKGELLVQQGRLQMEADQH
QQHIGTRDSLMKTLAAQLELDGFERTPFNQRQVASFQKLVKERQEKDEVNANQIMKEYSD
KEAAKQRQIDEIRDKKTGLERTIELKSTMQNKKQGDLRSIKSELQKLDGSSDRLQELDEE
LVKTERELESVERNCNVEALKSEVEQLQNQKSELDRTVRKLDQEMGQLNAHTTTRTQMDM
LKKDKAEKDDHIRKIKSRHNDELTSLLGYFPTKKQLEDWLYTKQKDINQTRDKLAKLNKE
LVSAEQSKNHMSNELRKKEEQCASFEEKLFNVCGSQDFDSDMTRLMDDIEKSSKQRAMLA
GATAVYTQFITQLTEENQPCCPVCQRIFPSEAELQDVINDMQSKLRLVPDKLKSTEGDLK
KREKRRDDMMELKPMRQMLIDHKEKEIPELRNKLVTINREIQRLKNDVEEQETLIATFMS
EEDSAKACLQDVSLMERYQMELRDVERKIAQHATKLQGVDLNRSVQQVNQEKQEKQLTLD
NVSGKIELLRKRIQDQQEQIQQLKSSANELRAEKLQISSNLQRRQQLEEQSVEMTTELQC
LSREIREAREQVFPLDNTMEKLQQEKKEILQSKDSSYRAVQERLNDMKEKVKKISLYVRD
IEKYISDGREEFKEQKETELQDLKTRLNDCEKHKEVINKDMMTIRQDIDTQKIQERCLQD
NLTLRKRMEELKKVQQEREHLLKEMGQIKAVQMRNEHQELENKIESLKTNHSLALGRQKG
FEDEIMRFKKELREPQYKDAEEKHREMMIVMRTTELANKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSADKRRTYNYRVVMIKGDAALDMRGRC
SAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQRN
FQLLVITHDEDFVELLGRSEYVEHFYRIKKNMDQCSEIVKCGVSSLGSYMH
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaatagagaaaatgagcatactcggtgtgcgaagctttggcgtagaggataag
gacaagcaagtcataactttctttaaaccattgactattttagtgggaccaaatggagca
gggaaaactactattattgagtgcctcaagtatatcaccacaggtgactttccacctgga
tctaaaggaaacacgtttgtccatgatcccaaggttgctcatgaaacagatgttagagcc
caaattcgtcttcaactccgagatgtcaatggagaacttgtggctgtgcagcggtctatg
gtgtgcactcagaaaggaaaaaaaacagaatttaaaacattggagggcgtgataacaaga
atgaagcatggagagaaagtcagccttagtacaaaatgtgcagaaatggacagagagatg
atcagtgcattaggagtgtctactgctgttctgaacaacgtcatcttctgccaccaggaa
gattccaattggcctctgagtgaagggagacagctgaagataaagtttgatgagatcttt
tcagccaccaggtatattaaagccttggataccttgcgccaggtgaggcagaagcaaggc
cagcgggttaaagaatgccaagcagagctgaagtatctaaaacagaataaagagaaagca
agagaaatccaagacatgctccggagtaaagaggcccagttagcagcctctaaagagaat
gtgaagtctattgataaccagcttgaaccactcaaaagtcgattaacagaagttcagaga
aacctttctaaagtaatgaagctggacaatgacattaaagctttggaaagcaggaaaaag
aacatggaaaaggacaataaggatttagaagataaaattgaaaagattttccaagggacg
gacgaagagcttaatgagatgtaccacaaccatcagaagaccgtgagagacaaggagaga
aagctcaatgattaccagcgcgagctggacagagtagtcaaagactgccagaggctgaat
cgagaaaagggggaactgcttgtccagcaaggtcgcctgcaaatggaggctgaccaacac
cagcaacatatcggaacgcgagactcactaatgaagaccttggcggcacaactggagctt
gatgggtttgagcgaactccatttaatcagaggcaggtagcaagctttcagaaactggtg
aaagaaagacaagaaaaagatgaagtaaatgctaatcagataatgaaagagtattcagac
aaggaagcagcaaaacaaagacaaatagatgagattcgggacaagaagacaggcctggag
cgaactattgagttaaagtccactatgcagaacaagaaacagggagatctcaggagcatc
aaatctgagttacagaaactagatggttcctctgacagactgcaggaactggacgaagaa
cttgtaaaaacggaacgggaactggagagcgttgagcgaaactgcaatgtggaagctttg
aaatcagaggtagaacagctccagaatcagaagtctgaactggacagaacagtgcgaaaa
ctggatcaggagatgggccagctcaatgcccatacaacaacacgcacccagatggacatg
ctgaaaaaagataaagctgaaaaagatgatcatattcgaaagataaaatccagacacaat
gatgaattgacttctttactgggatattttccaactaagaagcagcttgaagactggctg
tataccaagcagaaagatattaatcagacacgggacaagctggcaaagttaaataaggag
ctagtgtcagctgagcaaagtaaaaaccacatgagcaatgagctgcgaaaaaaggaagaa
caatgtgcatcttttgaagaaaagctctttaatgtttgtggtagccaagactttgacagt
gatatgacacgcctgatggacgacatagaaaagtcatctaaacagcgagcaatgctggca
ggagccacagctgtgtacactcagtttatcacccagctaacagaggagaatcagccctgc
tgtccggtctgccaaaggatcttcccttcagaggctgagctgcaagatgttattaatgac
atgcagtccaaactgcgcctggttccggataaactcaagtctacagaaggtgatttaaag
aaaagagaaaaaaggagagatgacatgatggagctgaagccaatgaggcaaatgctgatt
gatcataaggaaaaagaaatccctgaactaagaaacaagctagtgacaataaaccgggaa
atacagcgtctgaaaaatgacgtggaggagcaagaaactctaatagcaacttttatgtct
gaggaagacagtgcaaaagcttgtttacaggatgtatccctcatggagcggtatcagatg
gagttgagagatgtcgagcggaagatagcacaacatgctactaaactgcaaggggtagac
cttaatcgtagtgttcagcaggtgaatcaagagaaacaagaaaagcagcttaccttagat
aatgtttctggtaaaattgagctgctacgcaagcggatacaggaccagcaagaacaaatc
caacaactgaagagctctgccaatgagttgcgagcagagaaacttcaaatttctagtaat
ctccaacgtcgccaacaacttgaagagcagagtgtcgagatgaccactgagctgcagtgc
ctgtccagagagatcagggaagcccgagagcaagttttccctttggataacactatggaa
aaacttcagcaggagaagaaggaaatcctacagagcaaagactccagctacagagcagtg
caagaaaggctaaatgatatgaaagaaaaagttaaaaagatcagcttgtatgtaagagat
atagaaaagtatatcagtgatggaagagaagaattcaaagagcaaaaggaaactgagctg
caggacttaaaaacacgtcttaatgactgtgaaaagcataaagaagtaattaacaaagac
atgatgactattagacaggatattgatacccaaaaaatacaagaaagatgtctccaggac
aacctaacccttagaaagagaatggaggagctgaagaaggttcaacaggaaagagagcac
ctgttaaaagaaatggggcagataaaagctgttcaaatgaggaatgagcatcaagagttg
gaaaataaaattgaatcattgaaaacaaaccacagtctggctctaggccgtcagaaagga
tttgaggacgaaatcatgcggtttaagaaagaacttcgggaaccccagtacaaagatgct
gaagagaagcacagggagatgatgattgttatgagaaccacagagttggccaacaaagac
ctggacatttattataaaacattggaccaagccataatgaaattccatagcatgaagatg
gaagagatcaataagatcattcgtgatctttggcgcagcacctaccgagggcaagatata
gagtacatcgagattagatctgatgctgatgaaaatgtctctgctgataagagaagaaca
tacaactacagagttgtgatgatcaaaggagatgctgcactggatatgagaggacgctgc
agtgctgggcaaaaggttctggcatctcttattattcgtctggcactagcagagacattt
tgtctgaactgtggaatacttgccctggatgagcctactacaaatctggatcgtgaaaat
attgagtctcttgcccatgcattggttgagatcattaaaagtcggtcaagacagcgaaat
ttccagctgcttgtgattacacacgatgaagactttgtagagcttctgggacgttcagaa
tatgtggaacatttttaccggattaaaaaaaacatggaccaatgttctgagatagtgaaa
tgtggtgtgagctccttgggatcatacatgcattag
DBGET
integrated database retrieval system
