Nanorana parkeri (Xizang Plateau frog): 108792629
Help
Entry
108792629 CDS
T04897
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108792629 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npr04131
]
108792629 (TGFBRAP1)
Membrane trafficking [BR:
npr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108792629 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
zf-RING_UBOX
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
108792629
NCBI-ProteinID:
XP_018418950
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MSVQAFRLVCASGKEHLPAGIQIECLECSGHDLYIGTSDGCLHHLLLVEESGTESAGIPL
GQQSDYSNTNFTTTRQNQRQLGVKKPICELRAASALGRLLVLCDNTISLLCSDSLEPVPG
TKIRGVLSFTLNENPVSGDPFSVEVCLISSKRRTVQIFSVGQERVQIVREVATPEQPCCL
AADGYYLCLALSSRYVILNYNTGHCQDLFPYPSEQKRPIIKRISRQEFLLAGPGGLGMFA
TVAGISQRAPVRWSENVIGAAVSFPYVLALDEEFITVHSMLDQQQKQSLPFKEGVILQDF
EGRVIVATPNGVYVLIPLPLEKQIQDLLSNQRVEEALVLAKGARRNIPKEKFQVMYRRIL
QQAGFIQFAKLQFLEAKELFRTSHLDIRELISLYPLLMPSSSGFIRAHPPLHEYADLNQL
TRGDQEKVSKCKRFLMSYLSEIRSTEVANGYQQDVDTALLKLYAEADHESLLDLLVSDNA
CEVGDSAAWLEKHKKYFALGLLYHYNEQDAAALQVWVRIVNGDLEDNTRPDLFEYVVDFL
TFSKDQQLVWQYVDWVLQKSEQIGVQIFTKRSLDEQLQNGFCPDTIVSHLCKYRQALLLY
LEHLVMDKMIQKEKYHTHLAVLYLEEILRLKSRDSLGHIELEELHRRFQNLLRQSDLYRV
LFLIDKIKGTDLHMERAILHGKLEEHDQALDILVHQLKDFAAAESYCVWNSEGRDAPYRK
RLFQLLLSSYLRPSTPDNTLTVAAVDLLNNHPTEFDAASVLHLLPEEWSVQLLSPFLAGA
MRGHVHALRMSQVAVGLARTENIIYKKEKLNLKEKPIILSEKKFCHVCRKPFQEPVFARQ
PNGHIVHTHCATNQHVNSSIDHVPSQSKRT
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcaggcattcaggttggtgtgcgcatctgggaaggagcaccttcctgctgga
atacagattgagtgcttggagtgctctgggcatgatctctacattggcaccagtgatggc
tgtcttcaccatctgttgctggtggaagaaagtggcaccgagtccgctggaatacctctg
ggtcagcagtcagattattctaacactaattttactaccacgcgacaaaaccagagacag
ctaggtgtgaagaagccaatatgtgagttgagagccgcctctgcccttggccgcttactt
gtgctgtgtgataatacaatttctttgctgtgcagtgactctcttgagccagtaccggga
actaagatcaggggtgttctcagcttcaccctgaatgagaatccagtgagcggggacccc
ttcagtgtagaggtctgcttgatctcctccaagagacgtaccgtgcagatcttcagcgtg
gggcaggaacgggtacagatagttcgagaagtggctacgcctgaacagccatgttgtctt
gctgctgatggatattatctgtgcctggcactcagcagccgttatgtcatcctaaattat
aatacagggcattgccaggatctctttccctaccccagcgagcagaagagaccaattatt
aagaggatcagcagacaggagtttctgttggcagggcctggaggcttagggatgtttgcc
acggtagcagggatctcccagcgtgctccagttcgttggtctgagaatgtaattggagct
gcggtgtctttcccttatgtgctggctctagatgaagagtttatcacagtgcacagcatg
ttagatcaacagcagaaacaaagcctgcccttcaaagaaggagtcattctacaggatttt
gaagggcgggtgattgtagcaactccaaatggcgtgtatgttttaattccattacctttg
gaaaaacagatacaggatctactatcaaaccagagggtagaagaagctctcgtgctagct
aaaggagctcggcgcaatattccaaaggagaaatttcaggttatgtacagaagaatcctg
caacaggctggatttattcagtttgccaagcttcagtttttagaagcaaaagaattattc
agaactagtcacctagatatccgggagttgatttctctctaccctctcctgatgccttca
tcctcgggatttatccgcgcacatcctcccctgcacgaatatgccgatctcaatcagctc
acccgaggagaccaggagaaggtgtccaaatgcaaacgtttcctcatgtcttatttaagc
gaaatccgcagcacagaggtggctaatggttaccagcaggatgtggacacggccttgctg
aaactttatgcagaggcagatcatgagagcttgctggatctgctggtgtccgacaatgct
tgtgaagtgggagatagtgcagcctggctggaaaagcacaaaaagtattttgcacttggc
ctcctctatcactataacgagcaggatgctgctgctcttcaggtctgggttaggatagtg
aatggtgacctagaagacaacactcggccagacctgtttgagtatgtggtagactttctg
accttctccaaagaccagcagctggtgtggcagtatgtggattgggttttgcagaaaagt
gagcagatcggggtccagatcttcaccaaacgttctttagatgaacagttgcagaacggt
ttctgtccagatacgattgtgagccatctgtgcaagtaccggcaggctttgctgctctac
ctggaacacttggtcatggataagatgatccagaaggaaaagtatcatacacaccttgct
gtgctatacctggaagaaatcttaagactaaagtctagggactccttgggccacattgaa
ctggaggagctacatcggagatttcagaatcttctgcggcaatcagacctttaccgggtg
ctcttcctcatagataaaatcaaaggcacagatttgcatatggagcgagcaatattacac
gggaaactagaagagcatgaccaagcattggatatcttagttcaccagttaaaagacttt
gctgctgctgagagttattgtgtgtggaactctgagggcagggatgctccttatcgcaag
agactttttcagctccttctctcctcctacctccgtccctccacacctgacaacactttg
acggtcgctgctgtagacttattaaataaccaccccacagaattcgatgctgccagtgta
ttgcatttgttgccagaagaatggtctgtgcagcttctctccccatttctagcaggggcc
atgagggggcatgttcatgctttaaggatgtcacaggtggcagtaggattagcaaggaca
gagaacatcatctataaaaaggagaagttaaacttgaaggaaaagccaataattctgtca
gagaagaagttttgccatgtgtgccggaagccattccaagagccggtatttgccagacag
cccaacggtcatatcgttcatacccactgtgctaccaaccagcatgtcaacagcagcatt
gaccatgtgcccagtcaaagcaaacgaacatga
DBGET
integrated database retrieval system
