Nanorana parkeri (Xizang Plateau frog): 108793095
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Entry
108793095 CDS
T04897
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03018
RNA degradation
npr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108793095 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
108793095 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108793095 (LSM4)
03041 Spliceosome [BR:
npr03041
]
108793095 (LSM4)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108793095 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
108793095 (LSM4)
Spliceosome [BR:
npr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108793095 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108793095
NCBI-ProteinID:
XP_018419537
LinkDB
All DBs
Position
Unknown
AA seq
145 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVMSKGRGRGGMQQQKQMKGRGGGGGGGGGGAGRGVFGG
RGRGMPGGGRGGPQDKKPGRQAGKQ
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctttatctttgttaaagacggcgcagaaccatcctatgttggttgaattaaaa
aatggcgaaacctacaacgggcacttggttagctgtgacaactggatgaacatcaatctt
cgagaagttatttgtacttccagggatggtgacaaattttggagaatgcctgagtgctat
atacgtggtagcactatcaaatacttgcgcatccctgatgaagttattgatatggtgaaa
gaagaagtgatgtcaaagggcagaggacgtggtggaatgcagcaacagaaacagatgaaa
ggaagaggaggaggaggaggtggtggcggcggcggagcaggacgtggtgtttttggtgga
agaggcaggggaatgcctggaggtggcagaggtggaccccaggataaaaagccaggccgg
caagctgggaaacaatga
DBGET
integrated database retrieval system
