KEGG   Nanorana parkeri (Xizang Plateau frog): 108793426
Entry
108793426         CDS       T04897                                 
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108793426 (WDR82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npr03019]
    108793426 (WDR82)
   03036 Chromosome and associated proteins [BR:npr03036]
    108793426 (WDR82)
Messenger RNA biogenesis [BR:npr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     108793426 (WDR82)
Chromosome and associated proteins [BR:npr03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     108793426 (WDR82)
    COMPASS/SET1 complex (yeast)
     108793426 (WDR82)
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_IFT140_1st WD_LRWD1 VPS8_N Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_Nup120_160 MinC_C
Other DBs
NCBI-GeneID: 108793426
NCBI-ProteinID: XP_018419877
LinkDB
Position
Unknown
AA seq 408 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSPSGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
AFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMNYDRTCEWTSLKFSNDGKLILISTNGGFLRLIDAFKGAVLHTFGGYNNTKA
VTLESSFTPDSQFIMIGSEDGKIHVWNAESGMKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMVRMRSVVPWVPTPVEGNKHQCSIGISNSSESPTHRNLQLIGISNSSESPTHRNLQL
IGISNSSESPGTPPTLWCGFTTSVSLQAALSVHRPAHPVVLHRLLLEP
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgaagctgacggataatgtgctgcgtagtttccgcgtggcgaaggtcttccgggaaaat
tccgacaagatcaactgcttcgacttcagtcccagcggggagacggtgatctccagcagt
gacgacgactccatcgtcctgtacgactgtcaggagggcaagcccaagaggacgttgtac
agtaagaagtacggagtggatctcatcagatacacgcacgcagccaacaccgtggtgtac
agctccaacaaaatcgatgatacaatccggtatctttctctgcacgataataaatatatc
cgttatttcccgggtcacagcaaaagggtggtggccttgtctatgtcccccgtggacgat
gcctttatctccggctccctagataagacgatccgattgtgggaccttcgttctcctaac
tgccagggtctgatgcacctccagggaaagcctgtgtgctcgtttgaccccgagggtctg
atctttgcagccggagtgaattcggagatggtgaagttgtacgatcttcgctcttttgac
aagggccctttcgccaccttcaaaatgaactacgaccgcacttgtgagtggacgtctctg
aaattcagcaacgacgggaaactgatcctcatctccacaaacggcggtttcctgcggctg
atcgatgcatttaaaggggcggtgctgcacacctttgggggatacaacaacaccaaagcc
gtcacactggagtcctcgttcacgccggattctcagttcattatgatcggttcggaggac
gggaagatccacgtgtggaacgcagagagcggcatgaaagtcgccgttctggacggtaaa
cacacgggacccatcacctgtctgcagttcaaccccaagttcatgacctttgccagcgct
tgttccaacatggtaaggatgcgctctgtagttccctgggtgcccacacctgtagagggg
aataaacaccagtgttccatcggaatctccaactcatcggaatctccaactcatcggaat
ctccaactcatcggaatctccaactcatcggaatctccaactcatcggaatctccaactc
atcggaatctccaactcatcggaatctccaggaaccccacccaccctgtggtgtggcttc
accacctctgtgagcctccaggccgctctttccgtgcatcgccccgcccaccctgtggtg
ttgcaccgcctcctcttggagccctga

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