Nanorana parkeri (Xizang Plateau frog): 108793500
Help
Entry
108793500 CDS
T04897
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
npr04990
]
108793500 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
npr04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
108793500 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
108793500
NCBI-ProteinID:
XP_018419962
LinkDB
All DBs
Position
Unknown
AA seq
1694 aa
AA seq
DB search
MASPALDLDESTPTHESPPEAACREAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNAI
KPGLIKKINRLPTPIAGLDNVTLFLRGCKELGLKESQLFDPGDLQDTSNRTTVRISDCNR
KLRNVLVTVYWLGKATNSCASYSGNHLDLKEFEGLLAQMRKETEEVESPKRSIRDSGYID
CWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSESDQPHRR
LPDVRKDDMSARRVSFGDNKATVPFNQYLPNKSNQTSYLPAPLRKKRVEHDYRKSWSTAT
SPLGGERPFSHPETIEEEHGEGQNGEHGASSLISVKGQLGITEKLKGYFDQQEDDVKDQP
SGNEDEEARKLKSLQKVGIKVMPATKRYNSPKQFAEDHETVGIVLRKENSHPANEDSEEE
EECKMPDIERDDLATRRARMNQPKVSTPFNQYIGSYITKTKPSSDSSATTASFKHTMDKS
KKEHQDQPAEKMTILKENFAQRPIDNESDQEEEEKVPDIQKDDLAKRKTHGSVKQQKEPL
VFSKGSITRADLATWQRLKLSSEESEQTPSNGQTPKIDASRAANDDFGRRKLSLQEKRAR
NKQKFVHFGPVTEIDQKRWDKLCISKPSVSEANISDENASDIAYAKAVISDSAPTVQTVD
TVPVTHLQCQLRCTAEVSKIPDVSPDNDCEHGGPLPDSQRDDMLARRIGTFQKCVKVGHP
SSSTDDNQQNIHNENVKTPKAKLKENKQSLEDDDQLLSKDILPEVTVDMKSNLNDKPETH
AVQLNSEEDVCKEDTSLQNDRATPDPEKDDMMVRRISVSQRPPGVTLTHFLPVPFSLQKT
EEKSHIFQPKEKKPISSLHVTTITPNNTPQAHTAVRSDSPSKTLQQSTEEEPTELRDDLM
CQPACNPIENNPICAELKSQPPQESLESPDREVSRFSTRSSLSDDAESVSMCDMRYEEEG
SMLPHSRAHHEHLQFVNDLLKEEDDTWQDDLARWKTRRRSASQDLLQKEAERKKMERLLS
GEPDLSERRKSIKTYKEIVEEKEQREKELHEAYKGARTKEEAEKILQKYIERFTISEAVL
ERLVMPKILERSHSVEPGLLASSEDPNPLKYLRQESLPSPKFTSTVEATISPTSESDFKA
PLGPTSPTKSVVSKAVPMLTPKPYSQPRNTQHVLKAFKVDGKVSMNGEAMNGTEEHKEMG
SSATHQMFVPSLTRSQMFEGVARVDVQAVVVEPDASSIELSLKKPNVQNSVKHKEILPEE
RNHNDVVDGRDSSFHTGPSAEGTKQHKENPIVTSLEFTPSLAPPQTVVNGKDQEEEQKID
PKSLSLNFNVKEERETALHQVKTTQEHEQEALRKEQHGGTESSGSSAVLIPALNSPSRFC
SWDPDEERRRQERWQQEQERLLQERYQKEQEKLKDEWEKAQKEVEEEERKYYEEEKKIIE
DTLMPVTVSPATSLHRGVCEMNGSMTSNHREQQTTSEETWTEAKSCVKEAAQPEDIKPQV
SLWTLEGAVNRPEEQQKGSSRLETEETVPMTDKENNYTFHQQCSTLTSLHLQFGVTSESH
VSEDAASLNNFEDSKNSQPRSPCVDSKGLDPPETPRDTSYSSQSSTQCQSPSRYKRSVSG
KKLCSTCGLPLGKGAAMIIETLSLYFHIQCFKCGVCKGQLGDATTGTDVRIRNGLLNCND
CYVRSRTAGHPTPL
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggccagccctgcgctagacctggacgagagcaccccgacgcacgaatcccctccagaa
gccgcctgcagagaggcacagaagtggatcgagcaagttacgggtagaagctttggtgat
aaagactttcgcacgggactggaaaatggaatccttctttgcgagctgttgaatgcaatt
aaaccaggacttataaagaagataaacagattaccaacacctattgctggtttggataat
gtgacgttatttttacgaggttgtaaagaacttggcttaaaagaatcccagctgtttgac
ccaggagatctgcaggacacttccaacagaacaacagttaggatatcagactgtaaccgg
aagctacgaaatgtactcgtcactgtttattggctgggaaaagcgacaaacagctgtgcg
tcatacagcggaaatcacctggacctgaaagagtttgaaggcttgctggcacaaatgagg
aaggaaaccgaggaagtggagagccctaaaagaagtattcgtgacagcggctacatagac
tgctgggactctgagagaagcgattctctgtccccaccgagacacggcagagacgattcc
tttgacagcctggattcatttggttctcgctcacaacaaacgccatctccagatgtggtg
ctgagagggagcagcgatggaagaggaagtgactcagaatcagaccaaccccacagaaga
ttacctgatgtcaggaaggatgacatgtctgcccgacgggtatcttttggcgacaacaaa
gcaacagtgccttttaaccagtaccttcccaacaagagcaatcagacttcataccttcct
gctcctctgaggaaaaagagggttgaacacgattaccggaaaagctggagtactgcaact
tcaccactagggggagaaaggcctttcagccaccctgaaacaattgaggaggaacacggt
gaggggcagaatggagaacatggagcctcctcgctgatctctgttaaaggacagttagga
ataactgaaaaacttaaaggatattttgatcagcaagaagatgatgtaaaggatcagcct
tccggtaatgaagatgaggaggcccggaaattaaaaagccttcaaaaagttggaataaag
gtcatgcctgcaacaaagcgttacaacagtccaaagcaatttgcagaagaccatgaaacc
gtggggattgtgctacggaaagagaacagccacccagctaatgaggattctgaagaggaa
gaagagtgcaaaatgccagatattgagcgagatgacttggcgacacgcagagcaaggatg
aaccaacctaaagtttcaacaccttttaatcaatatataggatcctatattaccaaaaca
aagccttcttcggactcgagtgccaccactgcctccttcaaacataccatggataaaagc
aagaaagaacatcaagaccaaccggcggagaagatgaccattttaaaggaaaatttcgct
caaaggcccatagacaacgagtctgaccaagaggaagaggagaaagtaccagacattcag
aaggacgatctggccaagcgtaaaacacatggttcggtcaaacagcagaaggagcctttg
gtttttagtaaaggctcaataacaagggctgacttggcaacctggcagaggcttaagctg
tcttccgaagagagtgaacagacacccagcaatggccaaacaccaaaaattgatgcaagc
cgagcagccaatgatgactttggtagacgcaagttatccctgcaagagaagagggctcgc
aacaaacaaaaatttgtccactttggcccagttactgagattgaccagaagcgatgggat
aagctctgtatttccaaacctagtgttagtgaggcaaatataagcgatgaaaatgcctct
gacattgcatatgccaaagcagtaatctcagacagtgctccgactgttcagaccgtggac
accgtcccagtaacacatctacaatgccagttgagatgtacggcagaagtcagcaaaatc
ccagatgtgtctccagacaatgactgtgagcatggtggaccgttaccagattcccaacgt
gatgacatgttagcacgacgaattggcactttccagaagtgtgtcaaagttggccatccc
tcttctagtaccgatgacaaccagcaaaatatacataatgaaaatgtgaagaccccaaag
gctaaacttaaggaaaataaacagtcattggaagatgatgatcaactcctgagtaaggac
atacttcctgaagttacagttgatatgaaatctaatttaaatgacaaacctgagacgcat
gccgtacagcttaattcagaggaagatgtatgtaaagaagacaccagcttgcagaacgac
agggctacaccagatccagaaaaggatgatatgatggtcagaaggatctctgtgagtcag
agaccacctggggtaactctaactcacttccttccagtaccattttctctacaaaagact
gaagagaagtcacacatcttccaaccaaaggaaaagaagcccatcagctctcttcatgtg
accacaattactccaaataacaccccccaagcccataccgctgtcaggtctgacagtccg
tctaagacactacagcagagcacagaagaagagcccactgaattaagagatgatctgatg
tgtcaaccagcttgcaaccccattgagaataatcccatatgtgcagagcttaaatcccaa
ccaccacaagaatctcttgaaagtcctgaccgagaagtatcgagattcagcacacggtcg
tctctgtcagatgacgcggagagtgtgagcatgtgcgatatgagatatgaagaggaggga
agtatgctgccccacagcagagctcaccatgaacacttgcagtttgtcaatgatctgctg
aaggaggaggatgatacatggcaggatgacctggcacggtggaagacccgcaggagaagt
gcatcacaagacttgctacagaaagaagcagaaagaaaaaagatggaaaggttacttagt
ggggaacccgacttgagtgaaagaaggaaaagcataaaaacttacaaagaaatagtagag
gaaaaagaacaaagagagaaagaattgcatgaagcttacaaaggtgccaggacaaaagag
gaagcagagaagatactgcagaaatacattgagaggtttaccataagtgaagctgttctt
gaacgtttagtgatgccaaaaattctggagagaagccattcagtggagcctggcttactc
gcctcatctgaggaccccaacccattgaagtatctgagacaggagtcattgccttctcca
aagtttacttctacagtagaagcaactatatctccaacctctgaatcagattttaaagca
cccctgggtcctacatcaccaacaaaaagtgtggtttcaaaggcagtgcctatgttaaca
cccaagccttattcccagcctagaaatacacagcatgttctcaaagcattcaaggtagat
ggaaaagtgagtatgaacggagaggcgatgaatggcacagaggaacacaaagaaatggga
tcaagtgcaacacatcaaatgtttgttccctcactgaccagatcgcagatgtttgaaggt
gtagccagagtggatgtacaagcagtagtggtggagccggatgcatcctccattgaactt
agtttgaaaaagccgaatgtacagaactctgtcaagcacaaagaaattttgcctgaagaa
agaaatcacaatgatgttgtagatggaagagattcatctttccacacaggaccgtcagct
gaaggtacaaagcagcacaaggaaaaccccattgtcaccagcttagagttcacaccatct
cttgcaccacctcaaactgttgtaaatgggaaagaccaagaagaggaacaaaagattgat
cccaagtcactgtctctgaatttcaacgtcaaagaagaaagagaaacagcattgcatcaa
gtaaaaacaacacaggaacatgaacaagaggcactgcggaaagaacagcatggaggtacg
gaaagcagcgggagctcagcagtactaataccagctttaaattctccaagtcggttttgt
tcttgggatccagatgaagagcgaagacgacaggagagatggcagcaggagcaggagagg
ctgctgcaggagaggtaccagaaagagcaggagaagctgaaggacgaatgggaaaaagcc
cagaaagaggtggaagaggaggaacgtaaatattatgaggaggagaaaaagataattgaa
gacaccttaatgccagtgacagtgtcccctgctacaagtttacatcgtggtgtatgtgag
atgaatggaagcatgacctccaaccacagggagcagcaaaccacctctgaagagacttgg
acagaggcaaagagctgtgtgaaagaggcagcacagccagaagatattaaaccgcaagtg
tcattgtggacactggagggagctgtcaatagaccagaagaacagcaaaaaggctccagc
aggttggaaacagaagagacggtgcctatgacagataaagagaacaactatactttccat
caacagtgcagcacactcaccagccttcatttacaatttggcgtgacttcagaatcccat
gtgtctgaggatgcggcatctcttaacaattttgaggacagtaaaaacagtcagccaagg
tcgccctgtgtggattcaaagggactggatcctccagagacccccagggataccagttat
tcctcacagtcttctacacaatgccagtcacccagcaggtacaaaaggtctgtaagtgga
aagaaactatgttctacatgtggactaccacttggaaagggggcagccatgatcattgaa
acgcttagtctatatttccacattcagtgcttcaagtgtggggtttgtaagggacaactt
ggtgacgcaacgacaggaacggatgtcaggattcgcaatggtctattaaactgtaatgat
tgttacgtcagatctagaacggctggacaccctacaccattgtga
DBGET
integrated database retrieval system
