Nanorana parkeri (Xizang Plateau frog): 108793660
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Entry
108793660 CDS
T04897
Symbol
VPS4B
Name
(RefSeq) vacuolar protein sorting-associated protein 4B
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03250
Viral life cycle - HIV-1
npr03272
Virion - Hepatitis viruses
npr04144
Endocytosis
npr04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108793660 (VPS4B)
03272 Virion - Hepatitis viruses
108793660 (VPS4B)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108793660 (VPS4B)
09143 Cell growth and death
04217 Necroptosis
108793660 (VPS4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npr04131
]
108793660 (VPS4B)
03400 DNA repair and recombination proteins [BR:
npr03400
]
108793660 (VPS4B)
Membrane trafficking [BR:
npr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
108793660 (VPS4B)
DNA repair and recombination proteins [BR:
npr03400
]
Eukaryotic type
Check point factors
Other check point factors
108793660 (VPS4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
AAA_16
TIP49
AAA_22
AAA_5
AAA_14
RuvB_N
AAA_25
IstB_IS21
DUF815
AAA_18
AAA_2
NPHP3_N
PhoH
nSTAND_NTPase5
nSTAND3
AAA_33
RNA_helicase
AAA_24
AAA_17
AAA_28
Mg_chelatase
AAA_7
Parvo_NS1
NACHT
bpMoxR
ABC_tran
ResIII
Motif
Other DBs
NCBI-GeneID:
108793660
NCBI-ProteinID:
XP_018420168
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MAANGNNLQKAIDLAGKASQEDKAGNYEEALRLYQCAVQYFLHVVKYDTQGEKAKQSIRA
KCIEYLDRAEQLKAYLKKKEKAPAKPVKEGAPRHEEKGNDSDEGESGDPEKKKMQTQLQG
AIVMEKPNVKWGDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSY
LAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLAREHKPSIIFIDEVDSLCGS
RSENESEAARRIKTEFLVQMQGVGVDNEGILVLGATNIPWVLDSAIRRRFEKRIYIPLPE
AHARTDMFKLHLGTTAHSLTDADFRDLGKRTNGYSGADVSVIVRDALMQPVRKVQSATHF
KKVRGKSPLDPDQICDDLLTPCSPGDPNAVEMTWVDVPGDKLLEPIVGMADMLRSLANTK
PTVNDQDLEKLKKFTDDFGQEG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaacgggaacaacctacagaaagcaattgacctcgccggtaaagcctcacaa
gaagacaaagcaggaaactatgaggaagcgcttcgcttatatcagtgtgctgtacagtat
tttttgcacgtggtgaagtatgacactcagggtgaaaaagcaaagcagagtattcgagca
aagtgtatagagtatcttgacagagcagaacagctgaaggcatatttaaagaaaaaggag
aaagccccagcaaaacctgtaaaggaaggtgctcctcgacatgaagaaaaagggaatgat
agtgatgaaggggagtcgggggacccagaaaaaaagaagatgcagacccagctgcaaggt
gccattgtcatggaaaaaccaaatgtaaaatggggtgatgttgctggcctggaaggggcc
aaggaagcactcaaagaagctgtcattttaccaattaaatttcctcacctgtttacaggt
aaaagaactccctggcgggggatcctactttttggacctccgggaacaggaaagtcctat
ttagccaaggctgtagctacagaagcaaacaactccaccttcttctcaatatcctcttca
gaccttgtgtcaaagtggctaggcgaaagtgaaaagttggtaaagaatttatttcagctt
gccagggaacataagccctcaatcatctttattgatgaggttgactcactgtgtgggtca
agaagtgagaatgaaagtgaggcagctcgcagaattaaaacagagttcttggtacaaatg
caaggtgttggagttgataatgaaggcatcttggttcttggagccacaaatataccatgg
gtattagattcagccatccggaggcgatttgagaagcgaatatacattccccttccagaa
gcacatgcccgaacagacatgttcaaacttcatcttggaactacagctcatagtctaaca
gatgcagactttcgagacctgggaaaaaggacaaatggttactctggtgctgatgtcagc
gtaattgtgcgagatgccctaatgcagcccgtcaggaaagttcagtctgccactcacttt
aaaaaggttcgagggaaatctcctctagatccagatcaaatctgtgatgatctgcttact
ccatgttctcctggagatccgaatgccgttgaaatgacatgggtggatgtacctggagat
aagttattggaacccatcgtgggcatggctgatatgctgagatcactagctaacaccaaa
cctactgtaaacgatcaggatctggaaaaattaaagaaatttacagacgactttggacaa
gaaggataa
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