Nanorana parkeri (Xizang Plateau frog): 108793681
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Entry
108793681 CDS
T04897
Name
(RefSeq) embryonic polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03015
mRNA surveillance pathway
npr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108793681
09123 Folding, sorting and degradation
03018 RNA degradation
108793681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108793681
03041 Spliceosome [BR:
npr03041
]
108793681
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108793681
mRNA cycle factors
Stress granule specific factors
108793681
Spliceosome [BR:
npr03041
]
Complex C
Other components
Complex C specific factors
108793681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_Nup35
RRM_5
RRM_RdRP1_2
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
108793681
NCBI-ProteinID:
XP_018420192
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MNATGAGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDISTRRSLGYAYINFQ
QPADAERALDTMNFEVIKGKPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFS
AFGNILSCKVVCDENGSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRKERE
MEYGAKVMEFTNVYIKNFGEDMDDERLKQIFSAFGSTLSVKVMMDDNGRSRGFGFVNFGN
HEEAQKAVAEMNGKDINGRMVYVGRAQKRIERQTELKRRFEQIKQERISRYQGVNLYVKN
LDDGIDDERLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVST
KPLYVALAQRKEERKAILTNQYMQRLATMRALPGPMLGQFQQPTSYFLPAMPQPAARAFY
NPGPVAPVRPTAHWSTQQSRPPQYHPSTPILRAVPPRRIASNISTMKQASTQVPRVPSQS
QRVANIGTQTAGARAQVNPSVMRTMHQYKYSNSVRNAQTVGGSAHLQQVEPGQMLEEPLT
ASVLAAAPPQEQKQMLGERLYPLIHGMHAGLAGKITGMLLEIDNSELLHMLESPESLHSK
VEEAVAVLQAHHAKEGTLKTCTQVLM
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaccggggcaggatatccgctggcctccttatacgtaggggacctacatcca
gatgttacagaagcaatgctgtacgaaaagttttcaccagcaggcccaataatgtccatc
agagtttgtcgggacatttccactcgtcgatcccttggctatgcttatatcaatttccag
cagcctgctgatgctgaacgggctttagatactatgaattttgaggtcattaaaggtaaa
ccaatccgtattatgtggtctcagagagatcctggccttcggaaatctggagtgggaaat
gttttcatcaaaaaccttgatgactcaatcgataacaaagcattgtatgacacattctca
gcatttgggaacattttgtcttgtaaagttgtttgtgatgagaatggatcgagaggttat
ggctttgttcattttgagacccaagaggctgccaacagagcaatacagaccatgaatggc
atgctacttaatgacagaaaagtatttgttggtcattttaagtcaagaaaagaaagagaa
atggaatatggtgcaaaagtgatggagttcaccaacgtatacatcaaaaattttggagaa
gacatggacgatgaaaggctgaagcagatcttttctgcttttggaagcacgttaagtgta
aaagtaatgatggatgataatggccggtctcgtggatttggatttgtcaactttggaaat
cacgaggaagcacagaaagcagttgctgaaatgaatggcaaagatataaacgggcgcatg
gtttacgtaggaagagctcagaagcggatagaacgtcagactgaactcaaacgcaggttt
gagcagatcaagcaagagcggattagtagatatcagggagtgaacttgtatgtaaagaac
ctggatgatggtattgatgatgaaagactccgaaaagagttttctccatatggcaccatt
accagtgcaaaggtgatgacggagggaggacacagcaagggctttgggtttgtctgtttt
tcttctccagaagaggcaactaaggccgtaactgaaatgaatggacgaattgtaagcaca
aagcctctgtatgtagcactggctcaacggaaagaggagaggaaagcgattctcaccaat
cagtatatgcagaggctagcaacgatgagagcattgcccggtcccatgctcggccaattc
caacagcctacaagctacttccttcctgctatgccccagccagcggcccgagcattttat
aatccaggtcctgtagcacctgtacgaccaacagctcactggtcaacgcagcagtccagg
cctcctcagtaccatccatctacaccaatactgcgagccgttccccccagacgtattgcc
tccaacatcagtacaatgaaacaggcttccacgcaggtgcccagggttccttctcaaagt
caaagagtagcaaatattggtacccagacagctggcgcccgggcccaggtgaacccatca
gttatgcgcacaatgcatcagtacaagtattccaactctgtaagaaatgcacaaacagtg
ggaggcagtgcacacctccaacaggtagaacctggccaaatgctagaagagccactaaca
gcatccgtgctcgcagctgccccaccacaagaacaaaagcaaatgcttggtgaacgactt
tatcccttgatacacggcatgcatgcaggacttgccggaaagatcacaggcatgttattg
gaaatagacaattctgagctactacacatgctggaatctccagaatcacttcattcaaag
gttgaagaagctgttgctgtcctgcaagcacaccatgccaaggaaggcacccttaaaacc
tgcacccaggttcttatgtga
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