Nanorana parkeri (Xizang Plateau frog): 108794393
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Entry
108794393 CDS
T04897
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108794393 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
npr04040
]
108794393 (SCN8A)
Ion channels [BR:
npr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108794393 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
HpsJ
Lustrin_cystein
New_glue
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
108794393
NCBI-ProteinID:
XP_018420922
LinkDB
All DBs
Position
Unknown
AA seq
1983 aa
AA seq
DB search
MAAPLMAPPGPDSFKAFTRESLAAIEKRIAEEKKKKPAKADSSHRDDDDENGAAPNTDLE
AGKNLPFIYGDFPGKLIAQPIEDLDPFYLNKKTFIVLNKGKTIFRFSATPAMYILSPFNP
FRKIAIKILIHSVFSMIIMLTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESLVKMIAR
GFCIDSFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGHLRRKCVVWPINLDEQYLANGSKGF
DFDEYTNNDTNFYKPHGAIDPLLCGNSTDAGQCPEGYTCMKAGRNPNYGYTNFDTFSWAF
LALFRLMTQDFWENLYQLSLRASGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYDEQNQA
TLEEAEQKENEFKAMLEQLKKIQEEQAAAMATSAGTVTEDAVEDDEADARMSQTSSEFSK
PSSKSAKERRNRRKKRKQKELSEGEEKCDNEKVYKSESEDGMRRKGIWYPDNRLGRKFSI
MDQSLLSIPGSPYLSRHNSKSSIFSFRRSFREPETENEFADDEHSTVEESEGRRDSLFLP
VRGHNRRNSYNSGYSQGSRSSRIFPNLRRNVKRSSAVDCNGVVSLIGGPGANIGGRLLPE
VKIDKAATDDSPSTEVEIKKKPPGSSLRVSIDQLNASFGKKNRANSVISVVTQTLVEELE
ESQRKCPPCWYKFADTYLIWTCCPLWIRIKTAVNSFVMDPFVDLAITICIVLNTLFMAME
HYPMTEHFEGVLYVGNLVFTAIFTAEMFLKLVAMDPYYYFQEGWNIFDSFIVSLSLIEMG
LQGVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTVVLAIIVFIFAVVG
MQLFGKSYKDCVCKIHPDCILPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMC
LVVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQIAVIRIKKGIAWIKL
HVHNFIQTHFKKKAGDEKPLDDMYEKKNCLVNHAGVDITREMEYQKNGNGTTSGIGSSVE
KYLIDEDHMSFINNPNLTVKVPIAVGESDFENLNTEDISSASDDESKDKLYDTSSSEGST
IDIKPEVEEVPVEQPEEYLDPDNCFTDGCVARFKCCQVSVEEGFNKSWWTLRKTCFLIVE
HNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWLAYGF
VKFFTNAWCWLDFLIVAVSVVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVV
VNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCYNETAEDRFLIEDVNNRTEC
ENLINMNYSEVRWKNVKINFDNVGAGYLALLQIATFKGWMDIMYAAVDSRRVTEQPKYED
NIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLG
SKKPQKPIPRPLNMCQGAIFDLITQQAFDIIIMILICLNMVTMMVETDDQTDYAENVLYW
VNVVFIAFFTTECVLKLFALRHYYFTIGWNIFDFVVVILSIVGMFLADLIEKYFVSPTLF
RVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYV
KKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDPKKENPGSPMQGDC
GNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFD
PDATQFIQFGKLSDFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVL
GESGELDMLRQQMEERFVASNPSKVSYEPITTTLRRKQEDVSAVLIQQAYRRHLTKQGFV
CRKPSSTKMENGGTNMDRKEGTPSTASLPSYDSVTKPEVEKQERIQEAMRERAKRQKSVR
ESK
NT seq
5952 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccgcttatggcaccacctggccctgacagcttcaaggcatttactcgtgaa
tcgctggctgccattgaaaaacgtatagccgaagagaagaaaaaaaagccagcaaaggca
gacagtagccacagagacgatgatgatgaaaatggagcagcaccaaacactgacctggaa
gcaggcaaaaatttgccatttatctatggcgattttcctgggaaacttattgctcagcca
atcgaagacttagaccctttttatttaaacaagaaaacctttatagtattaaacaaagga
aaaacaatcttcagatttagtgccacacctgccatgtatattttaagtccttttaaccca
tttaggaaaatagctattaaaattttgatacattcagtatttagcatgatcattatgctc
actattttgaccaactgcgtattcatgacatttagtaatcccccagaatggtctaagcaa
gtggagtacaccttcaccggaatttatacatttgaatcacttgtaaaaatgattgcaaga
ggtttttgtatagatagttttacatttttgcgggatccatggaattggttagatttcagc
gttattatgatggcatatgtgacagagtttgtggaccttgggaatgtctcagcgctgaga
acattcagagttctccgagctttgaaaactatctctgtcattccaggtttgaagaccatt
gtgggtgcccttattcagtctgtgaagaaactgtcagatgtaatgattttgacagtgttt
tgcctcagtgtcttcgctttaatcggtctacagcttttcatgggtcatttaagacggaaa
tgtgttgtttggccaatcaacctggatgagcagtatttggccaatggcagcaaaggtttt
gactttgatgaatacacgaacaatgatacaaacttttacaaaccgcatggagccatagat
ccattactttgtggtaatagcacagatgctgggcaatgtccagagggatacacttgcatg
aaagcaggcaggaaccccaactatggctatacaaactttgatacctttagctgggccttt
ctagccttatttcgccttatgactcaggatttttgggaaaacctgtaccagctaagtctg
cgtgcttctgggaaaacctacatgatcttctttgttttggtcatctttgttggctcattt
tacctggtgaatttgatcctggctgtggtggccatggcttatgacgaacaaaatcaggca
actttggaggaggcggaacagaaggaaaatgaattcaaagcaatgttggaacaactgaag
aaaattcaggaagaacaggcagcagcaatggccacctcagctggtactgttactgaagat
gctgtggaggatgacgaagcagatgcaaggatgtctcagacttcttcagagttttccaag
ccaagttctaaaagtgctaaggaaagaaggaatcgtagaaagaagagaaaacaaaaagaa
ttgtctgaaggggaggagaaatgcgataatgagaaggtttacaaatcagaatcagaagat
ggcatgagaagaaaaggtatttggtatcctgacaataggctgggaagaaaattttcaata
atggatcagtctttgctaagcatcccaggctctccctacctgtccagacacaacagcaaa
agcagcatctttagttttcggagaagtttcagagagcctgagactgaaaatgagtttgca
gatgatgaacatagcacggtggaggaaagtgaaggccgaagagactctttatttttacca
gtcagaggtcacaaccggcgtaacagttacaacagtggatacagtcagggcagtcggtcc
tcccgcatctttccaaacctgcgaaggaatgtgaaacgcagcagtgcagtggactgcaat
ggcgtggtgtcattaattggtggtcctggcgccaatattggtggacgtcttctgcctgag
gtgaaaatagataaggcagctactgatgacagcccttcaacagaggtagaaataaaaaaa
aagcctccagggtcttctcttcgggtgtcaattgaccagctgaatgcatcatttggaaag
aagaacagagctaacagtgttattagtgtcgtgacacagactcttgtggaagaactggaa
gaatctcagcggaagtgtccaccttgttggtacaagtttgcagacacttatttgatatgg
acatgttgccctctgtggatacggatcaagacagcagtaaactcgtttgtaatggatcct
tttgtggacttggccataaccatctgtattgtccttaatactttattcatggcaatggaa
cactatccaatgacagagcattttgaaggtgttttatatgtaggaaacttggtgtttact
gcaatttttacagctgaaatgtttttgaagttggttgcaatggatccatattattacttt
caagagggctggaacatttttgacagctttatagtgagtcttagtttaattgagatgggc
cttcagggtgtggaaggcctttcggtgctacgttcttttcgactgctgagagtcttcaag
ctggccaagtcctggcctactttaaatatgcttattaaaatcattggaaactctgttggt
gccctcggtaacctgaccgttgtcttggccattattgtcttcatttttgctgtggtggga
atgcagttatttggcaaaagttacaaggattgtgtctgcaaaatacacccagattgtata
ctaccaagatggcacatgaatgattttttccactcgttccttattgtcttccgtgtttta
tgtggagaatggattgaaaccatgtgggactgcatggaggtcgccggacaagcaatgtgt
ctagttgtcttcatgatggtcatggttattggtaacttagtggtgttgaacctgttcctt
gctctgttactgagctcattcagcgctgacaatctagcagccactgatgatgatggagaa
atgaacaacctccaaatagctgtcattcggattaaaaaaggcattgcctggattaaacta
catgtccacaacttcatacaaacacactttaagaagaaggctggtgatgagaaaccttta
gatgacatgtatgagaagaagaattgcttggtaaatcacgccggagttgatatcactcga
gagatggagtatcagaagaatggaaatggcactaccagtggtattggtagcagtgtggaa
aagtatttgatagatgaagatcatatgtcattcatcaacaacccaaacctcaccgtcaaa
gtgcccatcgcagtaggagagtcagattttgagaatcttaacacagaggatattagcagt
gcatcagatgacgaaagcaaagataaactgtatgacacaagttcttcagaaggaagtacc
attgatataaaaccagaagtagaggaagttccagtggaacagccagaagaatacctggat
ccagataactgctttacagatggttgtgtggcacgtttcaagtgttgtcaagtcagtgta
gaagagggctttaacaagtcatggtggactctgcgaaaaacctgttttctgatagtggag
cataactggtttgaaacctttatcatcttcatgattttgttgagctctggtgctctggct
tttgaagatatctacatagaacaacgcaaaaccattagaacaattctcgagtatgcggac
aaagtttttacttatattttcatcttggagatgttattgaagtggttggcttacggattt
gtcaagttcttcacaaatgcctggtgctggctggacttcctcattgttgctgtctctgta
gtaagccttatagctaatgccctgggctactcggaactaggtgccattaagtcccttagg
accttaagagctttgagacccctaagagccttgtcacgatttgaagggatgagggttgta
gtcaacgctttggttggagctatcccctcaattatgaatgtattgctggtctgccttata
ttttggctgattttcagcatcatgggtgtcaacttgtttgctggcaaatactactactgt
tacaatgagacagcagaagacagatttctcatagaggatgtaaacaatcgaacagaatgt
gaaaatctcataaatatgaactattctgaagtcagatggaaaaatgtaaagattaacttt
gacaacgttggggctggataccttgcattgcttcaaatagctacgtttaaaggatggatg
gatattatgtatgcagcagtagactctaggagggtcacagaacagccaaaatatgaggac
aacatctatatgtatatctactttgtcattttcatcatctttgggtcctttttcaccctt
aatttatttattggtgtcatcattgataactttaaccaacagaagaaaaagtttggaggt
caggatatctttatgacagaagagcagaaaaaatactacaatgctatgaagaaactgggc
tcaaagaaacctcagaaacccatccctaggccattgaatatgtgccaaggtgccatcttt
gatttgatcacccagcaagcatttgatataatcatcatgattctcatctgtctgaacatg
gtcaccatgatggtggaaacagatgatcagactgattatgctgagaacgtcctgtattgg
gttaacgtggtttttattgccttttttaccacggagtgtgtgttaaagctgtttgcacta
agacattactactttaccatcggatggaatatttttgactttgttgtagtaattctttca
attgttggtatgttcctggctgatttgattgaaaagtactttgtgtcaccaacactcttc
agagtcattcgtttggctcgaattggccgtatacttcgcttaatcaaaggagccaaagga
attcgaaccctgctttttgccttaatgatgtcattgccggccttgtttaatatcggcctg
ctactgtttctcgttatgtttatattttcaatatttggaatgtcgaactttgcttacgtg
aagaaagaagcaggaatagatgacatgttcaactttgagacttttggcaatagcatgatt
tgtttatttcaaatcactacctctgctggctgggatggcttgttattacccatcttaaac
cgccccccagactgtgatcctaagaaggagaatccaggaagtccgatgcaaggtgattgt
ggaaacccctctgtaggaatctttttctttgtcagctatatcatcatctcctttctcatt
gtagtaaacatgtacattgctataatcctagaaaattttagcgttgccacagaagagagt
gcagatcctctaagtgaggatgactttgaaacattttatgaaatttgggagaaatttgat
cccgatgccacccaatttatccagttcggtaaactctcagattttgctgatgccttggag
catccattgagagttcccaagccaaacacaattgaacttattgccatggatttgcctatg
gtgagtggtgacagaatccattgtttagatatcctctttgccttcaccaaacgtgtgctt
ggagagagcggggagctcgatatgttgcggcagcaaatggaagagcgttttgtagcttcc
aatccttcaaaagtgtcttatgagcccatcactactacgctcaggcgcaaacaggaggat
gtatcagctgtacttatacagcaggcctacagacgccatttaaccaaacaaggttttgtt
tgcagaaaaccttcgtcaactaaaatggaaaacggaggaacaaatatggacagaaaagaa
ggcaccccttctacagcatcgttgccatcatatgacagtgtaactaaacccgaagtggaa
aaacaagaaagaatacaagaagcaatgagagagagagcaaaaagacaaaaatctgtcagg
gaatccaagtga
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