Nanorana parkeri (Xizang Plateau frog): 108794429
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Entry
108794429 CDS
T04897
Symbol
FOCAD
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108794429 (FOCAD)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108794429 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
108794429
NCBI-ProteinID:
XP_018420967
LinkDB
All DBs
Position
Unknown
AA seq
1559 aa
AA seq
DB search
MYLKNVCASFQLHSDLYKKELYLLSLQALCACDISLKITGDCSTLIHMLEQNLDLLKDNF
PVEQTLVGLSLLLLQAPASQQRQMMTLALRMLDTLKEKKMSPMARLLVMPILLVVSSSGL
TDCFSVKEGGSSLQQLALTILEKIQDVDNREMETEKLAVEMLSFPISSWHCTMSVTLTMV
KKFIEDSSASYDWLSSVSSILPFTTCVPSHISLLLGYLLIHESGKSFKKALKVTSEVANA
DSSQVPYLVPVLMFRLGRPLEPKLLREILYTLPMLGTHKVCVPQILRSLQMIGSASKLQP
VVLRLMTSLWEKQDRVYPELQKLIAAADSQCLSTGKETQWEKTVAKAATIRDICRQRPYQ
HGADMLAAITQVLNECPNPDQATPVALVLQGLQALCQAEVVDIRSTWNALSPKLACEKRP
HVLKVLHELFALVPSLTVNTEDYEKFKAEVISILWNHTRSKDVVVSSSAYKSLCQFNGDE
HTILHLPEQARPEIIPPEESDLAGEEDEKEVDLSVPGSSYIKLMALTPSPVLPAYEEFLS
SLVKQEMSRMPRGIYHNALRGGTIRSDQGKTVAGIPSFMLKMYEKNRQPGLKPGLAAGML
LCYDLPVLTDRDGRPINRFLASRGRSYQQMLTALIHEVNIQSSEWHRSILLPQSWLGFMG
RAFHAVLQGRQAELEMQLKHGKDDPQELQYKAHTAWLWVRDALTDVIRSSIKDSPVVKGN
ALLALTGLAATVSKYENSLPSESEGAPEIEPDILPTKAWIGMVLDTLLSIVSSHYYPKGR
VFPWFQQKSYSGENTASVIARSCAATALSLLVPVLVVSFKEKVGEILSILTTRLPGRPEA
DESQSLQVHMGLALGMFISRLCEEKVSDTSGQQMNLIIMKSLDALESCCFDASLEFNIGC
ILGVGLVLCFMSQSSQTDSRVHVSATLRKLYECLENSGEQSRAVQEVLSYSVACVSVSAF
SAGVVGADEAEEHMNKLRILTEQNQQTPGFALSLGAIVHGLSVCGHGKAEDLNNRLLPAW
IKILLAEGCPTMQRLASLNGLVALVGSESALIQLKSEAIQSSLFQSKLNEVIKTITQIIT
FSGVIGLQTNAAWILGHLHLSSLSLSQSRTSVPPDFSYLPERSLIRVIADFLISAGKKGP
ELMPTSLVKVCTSSIAAAADDYQYPPVNWASILAPLMRLNFGEEIQKLCVRIAVTQAQSS
QNAAVLLGMWLVPPLAYSLTVQTCSYLITSLSLWMKHVSEDKLQTFADVFMITQFEAQKK
TYDVEMSRNILLGLSQAMKLPSPSQACWSFLCKTTERIFQLLPDVIQKTNVDLYIEVTKC
ISEMADSEIDRITCISKEYIRKSTFVRLILISQGRLPLTYLDGMINVTAESRDKQTITWM
LLQAFYQARLTSHQNTGVLKRMEWLIDLISHIRNIAHKSTQVHNVPVSEALDFFLQVFAA
SVVAWADHAAPLLLGVYGSWSPCKHEAALTPGCLGSQSLDIVTVHGCLTTLPLSLQLLLA
KEPWKEHTQKFIDWLMTILESPEGALSESSSTTLKATLINLRGLPEFKRKAVWTRAFGW
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgaagaacgtgtgtgctagcttccagctacattctgatttgtataaaaaagag
ctatatctgttatctcttcaagccctgtgtgcatgtgatatcagtttaaaaatcacagga
gactgctcgacactgatacacatgctggaacaaaacttggacctactgaaagataatttt
ccagtggagcagaccttagttgggctcagtctgcttttactacaagctcctgcaagtcag
caacgacagatgatgactctagctcttagaatgttggacacactaaaggaaaagaaaatg
tcacctatggcccgattgctagtaatgccaatattgctggtggtgtcatcttcaggcctg
acagactgcttcagtgtgaaggagggaggatcttctttgcagcaactggctctaacaatc
ttagagaaaatacaagatgtagacaacagggaaatggagacagagaaattggctgtagag
atgctgtcttttcctatatcaagttggcactgtacaatgtctgttactttgaccatggta
aagaaatttatagaagatagtagtgcttcctatgactggttgtcctctgtgtcctcgata
ctgccattcactacatgtgtcccttcacatatatcactgctgctggggtatctacttatt
catgagtcaggaaagagttttaaaaaagcactaaaagtcaccagtgaagttgccaatgct
gattcttctcaggttccttacttggtgccggttttgatgtttagacttggacgcccattg
gagcctaagttactgcgagaaattttgtacactcttcctatgttggggacacacaaggta
tgtgtgcctcagatccttcgatccttgcagatgattggcagcgcatcgaagcttcaacca
gttgttttgcgccttatgacatctttgtgggaaaaacaggatagagtctatccggagctc
cagaagctaattgctgctgctgattcccagtgtttatcaactggcaaagaaacccagtgg
gagaaaactgttgcgaaagcagcaactatccgggatatatgcagacagaggccttaccaa
catggggcagacatgctagctgctatcactcaagttttgaatgaatgcccaaatcctgac
caagccactcctgttgccctggtattacagggtcttcaagctctgtgccaagctgaggta
gtggacattcgttctacctggaatgctttgtctcctaagctagcatgtgagaagcgccct
catgttctcaaagtattacatgagctctttgccttggttccctccttaactgttaacaca
gaagactatgagaaatttaaagctgaagttatcagcatcctctggaatcacactcggagt
aaggatgttgttgtgtcttcttcagcatacaagtccctgtgccagtttaatggtgatgaa
catactattcttcatctgcctgagcaggctaggccagagataatcccaccagaagagtct
gatttggctggagaagaggatgaaaaggaagtggacctttccgtacctggctcctcatat
ataaaactgatggcactaactccatctcctgtattgccagcatatgaagagttcctctca
tctttggtgaagcaagaaatgagtcgtatgccacgtggcatataccataatgccctccgt
ggtggaacaatacgatctgaccaggggaaaaccgttgcaggaattccaagcttcatgctg
aagatgtatgagaagaacagacagcctggtctgaaacctggacttgcagccggcatgctg
ctgtgctatgacctgcctgttctgacggacagagatggcagacctatcaatcgcttcctt
gccagcaggggccgcagttaccagcagatgttaacagcccttatacatgaggtaaatatc
cagtcctcggaatggcatcgctctattttgttgcctcagtcatggcttggcttcatggga
agggcattccatgctgtgcttcagggtaggcaggctgagctggaaatgcagctgaaacat
ggaaaggatgacccacaagaactccagtataaagcacacacggcatggctatgggtgaga
gatgcgctgactgatgtaataaggtcttctatcaaagacagccctgtggtaaaggggaat
gcactcttagctctcactggcttagctgccactgtctccaaatatgaaaacagtcttcct
tcagaatccgaaggtgccccagagattgaacctgatatccttcccaccaaagcctggatc
ggtatggtgctggacacccttcttagtattgtcagtagtcattattatcctaagggcaga
gtctttccttggttccaacagaaatcctattctggggagaacacagccagtgtcattgcc
cgttcctgtgctgccaccgccctctctttgctggtcccagtgcttgttgtatcttttaag
gaaaaggtgggggagattctcagcatcctgactactagattacctggaaggccagaggca
gatgagtcgcagtctctccaagttcacatggggctggcactgggaatgttcatctctcgt
ttgtgtgaagagaaagtcagtgacacctctggtcaacaaatgaacttaataatcatgaaa
tctttggatgctttagaaagctgttgttttgatgctagcctggaattcaacattggttgc
atccttggagtgggtcttgttctttgcttcatgagtcaaagcagtcagactgacagccga
gtccatgtctcagccactctccgtaagctgtatgaatgtctggagaacagtggtgaacag
agccgagctgtgcaagaggtgctgtcatactctgttgcctgtgtctcagtgtcagccttc
agtgctggagttgttggtgcagatgaagctgaggaacacatgaataaactgagaatactg
acagagcagaaccagcagacaccaggtttcgctctttctctgggagctattgttcatggc
ttgtcagtatgtggtcatgggaaggcagaggacctgaacaatcgtttgctacctgcctgg
attaagatcctacttgcagaaggttgccctactatgcaacgcttagcttcacttaatgga
cttgtggcattggtaggctctgagtctgcgcttatacagctgaaatctgaagctatccag
tcatccttgttccaaagcaagcttaatgaagtcatcaaaacaattactcagatcattacc
ttttctggagtaattggtctgcaaacaaatgctgcctggattctgggccaccttcactta
tccagcctttctttatctcagagcagaacatctgtacctcccgattttagctacttgccc
gaaagaagcctaatacgagttattgcagatttcctcatttcagctggcaaaaaaggccct
gaactgatgcctacatctctggtcaaggtgtgcacatcttctattgctgccgcagctgat
gactatcagtatcctcctgtcaactgggcatctattcttgctcccctaatgaggcttaat
tttggtgaagaaatccagaaactatgtgtgcggatagcagtgactcaggcccagtcctcc
cagaatgcagctgtgctccttggaatgtggctggttccacccttagcttacagtcttact
gtacaaacttgctcctacctgattacctcactatctctgtggatgaagcatgtctctgaa
gataagctacaaacatttgcagatgtattcatgattacacaatttgaagcgcaaaagaag
acctacgatgtagagatgtccaggaacattctgctgggcctgagccaggctatgaagctt
cccagtccctctcaggcctgttggagttttctgtgcaaaaccacagagaggatcttccag
ctgttaccagatgtcatccagaaaacaaacgtggatctgtatattgaagttacaaaatgc
atctcagaaatggctgatagtgaaattgatcgaataacctgcatttccaaggagtacatt
aggaaatccacatttgtgcgattaattctaatctctcagggacgtctgccattgacatac
ttggatggtatgattaatgtaactgcagaaagcagagacaagcagaccattacctggatg
ttactgcaggctttctatcaagcacgccttacaagccaccagaatacaggtgttctaaag
aggatggaatggctgattgacctcatcagtcacataagaaatatagcccataagtcaacc
caagtgcacaatgttccagtcagcgaggcattggacttttttctgcaagtttttgcagca
tctgtggtggcttgggctgatcatgcagctcctttgctactcggagtatatggtagctgg
agtccatgtaaacatgaagcggcacttacccctggctgtttgggaagtcaatccctggac
attgtcactgtacatgggtgtttaactaccctcccattgagtttacagttattgttagcc
aaagagccttggaaggaacacacacagaagtttatagactggctaatgactatccttgaa
agtcccgaaggagccttgtcagaatcctcaagtacaacattgaaagctacacttatcaac
ttaaggggccttccagagtttaaaaggaaagcagtgtggacaagagcttttggctggtaa
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integrated database retrieval system