Nanorana parkeri (Xizang Plateau frog): 108794512
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Entry
108794512 CDS
T04897
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108794512 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
npr01007
]
108794512 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npr03016
]
108794512 (VARS2)
Enzymes [BR:
npr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
108794512 (VARS2)
Amino acid related enzymes [BR:
npr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108794512 (VARS2)
Transfer RNA biogenesis [BR:
npr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108794512 (VARS2)
Prokaryotic type
108794512 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Jag_N
Motif
Other DBs
NCBI-GeneID:
108794512
NCBI-ProteinID:
XP_018421060
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MLRLLLGNSHNAIGRTPRRAVANITERIKRDERRQRQRAQQEEGAAQVSQVKGQHWKEKE
VTKYEISTVPGDKKDTTCPLPSSYSPHYVEAAWYAWWVKEGFFKPEYQSRLPQSTPEVFS
LCIPPPNVTGSLHLGHALTVAIEDSLVRWRRMLGQKVLWVPGSDHAGIATQAVVEKKLFK
EQGLSRHDLGREVFLKTVWKWKEEKGDRIYHQLKSLGASLDWDRACFTMDEGFSRAVSEA
FIHLYEDGLVSRRRRLVNWSCALRSAISDIEVENRQLTSKTYLTVPGYQKKVPFGLLFRF
AYPTEGADDEITVATTRPETMLGDTAVAVHPEDQRYQKFHGKNLFHPFTGRLIPVVTHSL
VNPEFGTGAVKVTPAHSLVDFEMAKDLALPLVSVIGEDGTMTQAGGEWIQGVKRFDAREK
LVAALKEKGLYRGDSEHSMVLPVCSRSGDVIEHLLKNQWFVNCEKMAQRAVQAVDSGLLK
ITPSYHQKNWRNWLSNISDWCVSRQLWWGHQIPAYLVTLPDMQITDKNEGFWVVAHTEEE
AREKAAKALGKSESELSVKRDEDVLDTWFSSALFPFAMLGWPENTRDLTEFYPNSLLETG
SDLLFFWVARMVMLGEQLTGQLPFKEVFLHSMVRDAHGRKMSKSLGNVLDPLDVMTGISL
ECLKEKLKEGNLDPREFKVAEAGLLKDYPNGIPECGTDALRFALCSHRVQGDDINLDVAS
VLAVRHFCNKIWNGVKFTLTALGDNFTPLPMDQLRPQAPIDRWLLDRLRHTTEECESKFQ
AFEIHGAAGAIHSFWLQSFCDVYVEAVKPILKGPGAADAKQVLYWGAENTLRLLAPFTPY
LSEELWQRFPAAPSQSAPSVCVAEYPTPRLTAHWNYPEEVEHFDFVHSVIRTLRRLRNEF
SLTKARPEVHIICSREEDLASLQSFLSPMRTLSLSGPLHIQLSSIISQDGDDRIGWAAEE
VMDNCRVYMNLQGLVDPQSELGKLQPKLEKLVRQLQGKNPREEEDNEDSSVHLKISRLQQ
TIRTLRQMLQN
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcctccttcttggcaacagtcataatgctattgggagaacaccccgcagggct
gtggccaacatcacagaacgcatcaagcgggatgagcggagacaacggcagagagctcag
caggaagagggcgctgctcaggtctcacaagttaaaggtcagcactggaaagagaaagaa
gtgaccaagtatgaaatctccaccgtgccaggggacaagaaagatacaacatgtccgctg
ccctcctcctacagcccacactatgtagaagctgcctggtatgcttggtgggtgaaggaa
ggtttctttaaaccagagtaccagagtcgtctccctcagtcaactccagaggtcttctct
ctctgcattcctccaccaaatgtcactggttctcttcaccttggacatgctcttactgtg
gctattgaggactctctcgttcgctggaggaggatgctgggtcaaaaagttctctgggtc
cccgggtctgatcatgctggaatcgcaacacaggccgtggtggagaagaaattatttaaa
gaacaaggactttcccgccacgatttgggccgagaagtattcctaaagaccgtctggaag
tggaaggaagagaagggggacagaatttatcatcagctcaaatctcttggcgcctcgctt
gactgggaccgagcctgcttcactatggatgagggtttctcccgggccgtgtctgaagca
tttattcacctctatgaggatggcttagtctctcgtcgacgtcggctggttaactggtcc
tgtgccttgcgctcagctatatctgacattgaggtagagaacagacagctgaccagtaaa
acatatcttactgtgccgggatatcagaagaaagttccgtttggtcttttgttcaggttt
gcttatcccacagaaggtgcagatgatgaaatcacggtggccaccacacgtccggagacc
atgctaggtgacactgctgtggccgtccatccagaggaccaaagataccagaaattccat
ggaaagaatctttttcatcccttcactggacgtttaatccctgttgtcacccacagcctg
gtcaaccctgagtttggcacaggagctgtaaaggtcacccctgcccacagcctggtggat
tttgagatggcgaaagatctggcattgcctttagtttctgtgattggggaagatgggaca
atgacccaggccggcggagagtggatccagggtgtgaagagatttgatgctcgagagaag
cttgtggctgcactaaaggagaaggggctatatagaggggacagcgaacactccatggta
cttcctgtctgcagccgctctggcgatgtgattgaacatttattgaagaaccagtggttt
gtgaactgtgagaagatggctcaaagggctgtacaggctgtggactcaggactgttaaaa
atcactccatcctatcaccagaagaactggaggaattggctctcaaatataagtgactgg
tgtgtgtcccggcagctatggtggggacatcagattcctgcttaccttgtgactcttcca
gatatgcagatcactgataagaatgaaggattctgggtagttgctcacactgaggaggaa
gccagggaaaaggccgctaaagcattgggaaagtcggagagtgagctcagcgtgaagaga
gatgaagatgttctggatacttggttttcatctgctctcttcccatttgccatgctggga
tggccagaaaatactcgagacctgacggaattttatcccaactctctgctggagacgggc
agcgatctgcttttcttctgggtggcccgaatggtgatgttaggagagcagctcacaggg
cagttaccatttaaagaggtatttctgcattcgatggtccgagatgcccatgggaggaag
atgagcaaatctctgggaaatgttctcgatcctctggatgtgatgactggaataagtcta
gagtgtttgaaggagaagctaaaggaagggaacttggatccgcgggagtttaaagtggca
gaagctggactgttaaaagattacccaaatgggatccctgagtgtggtacggatgccctt
cgattcgctctctgctctcatagagtacaaggagacgatattaatctggacgttgcctct
gtactcgccgtccgccatttttgcaataaaatctggaacggagtgaaattcacactaacg
gctttgggcgacaattttactccactgccaatggatcagctcagacctcaggcccccatt
gaccgatggcttctggatcgtctgcggcacacaacggaggagtgtgagagtaaattccag
gccttcgagattcatggagctgctggggccattcattcattctggttacagagcttctgc
gatgtctatgtggaagctgtaaaacccatcctgaaaggacctggtgctgctgatgccaaa
caagtactctactggggagcagagaatacccttcgccttcttgccccatttacaccgtac
ctgtcagaagagctgtggcaacgttttccagctgccccttcacaaagtgcgcccagcgtc
tgtgttgctgagtacccaacacccagactcacggctcattggaattaccctgaggaagtg
gaacactttgattttgttcactcagtaatcaggacgctgcgcagattgaggaacgaattc
agcctgaccaaggcgagaccggaagtccacattatctgttcccgggaagaggacctggcc
tctcttcagtctttcctgtccccaatgcggacgctgtcactgtcaggccctcttcatatt
cagctgtccagtattatctctcaggatggtgatgaccggattggctgggctgctgaggaa
gtgatggataactgccgggtttatatgaatcttcagggattggttgacccgcagtcagag
cttggcaagctgcaacctaaactggagaagttagtgcgtcagcttcaaggcaagaatccg
cgtgaggaggaagacaatgaggatagctcggtacacctgaaaatctccagactgcagcaa
acaataagaactttgcggcagatgttgcagaactga
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