Nanorana parkeri (Xizang Plateau frog): 108794666 Help Entry 108794666         CDS       T04897                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism npr  Nanorana parkeri (Xizang Plateau frog) Brite KEGG Orthology (KO) [BR:npr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:npr03021]     108794666 (SETX) Enzymes [BR:npr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      108794666 (SETX)     5.6.2.5  RNA 5'-3' helicase      108794666 (SETX) Transcription machinery [BR:npr03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      108794666 (SETX) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 SEN1_N AAA_19 AAA_30 AAA_22 UvrD-helicase AAA_16 PH_ULP NAT10_TcmA_helicase nSTAND3 Motif Other DBs NCBI-GeneID:  108794666 NCBI-ProteinID:  XP_018421253 LinkDB All DBs Position Unknown AA seq 2467 aa AA seqDB search MSTCRWCTPGGSVTAELLKSYAVKELPNEDCVGANDDLSYCMECVVEYHKARDEVPQLHK SLWPLETSRLIAQLENAMREEIEDDDELYLIEDDGEKQLFGYGGCSFESDVRVPLLEILK FPYLLLDKRISELSVEALCKMEQVNNTFQVYEKLPGVYLLLVHPNETIRHWAILTARAQG KVDRDDYYDLEEVFTCLFKVIELGLFENSDIYMYTEVEDGKLILLPSHLYDTSNYKNYWL GICMLLTVLEEQAMASLLLGPNKQNDFMQSILHVMEKQTEDESINPFWPALHCFMTILDR LGSKVWGQLIDPIQAFQTIIGSPSYNSEIEIIRKSCQRTTKCEPDLDDDDFVTCSQAVYS FNTEKVKKEAGWKSAICPDYCPNMYEDMQSLANILQSDIGQDMRVHNSTFLWFIPYVQSV MDLKDLGVAYIMEVIHHLSSEIKVVFTQGTNQCDKVTEFFVRVLVSVIELHRSKKCLHFL YISSHKWVDAIVKCALLPVKSPRITSTSALSSSPTSQTPSSVQFACMQLIRSLLREGYPL GQQAACKQYLDKFNLIIRGNVLRNLDLSKSEVQGLQTCLTQIIKNIKDKESSIPSSPADP NPASLAQAVPFIKTERIDDECCGANITSPYSSDVPVYPLERREVLKCQIKKEPPDERRTD VEYNSYLPSCSSRFKTQIKNEKLDDTSTLISAREEPKKLLTGWQSKLSEVMAKVPNLKPN ATSVETESKISTIEGSTKPAQKPCYATIEEQTDLLLKVKSYGKESESGDLSDSDDNIPLT LFSKKHLDKKQSVTDNVPVSEQLQRLSLDNNPAGRPIKKEFQGVADISASSFLESNTDCI MDSETDDDDALPLCFVKEKLMKSSKKSALANTKMNRNSDHTEVVAQTKGSNFPDDSIRQA CDVPDFCSIKRKVIGSSRALGDENVSCKTELSDIITISDDSDQEEEPFCKSVKIEKQDPG QDTKESPIQRTEQVEFEPVDPNFEEYGSQVFEFETQDDIYSAWSDSQLEEKKPNVQENLS SRPETSNIENFDQDNDLNKWGYDTDYVSDEIIEKAAEDAEQQFKALTSAANIKSGREHGG NKSPHEAVNSSVSFGKRSHEFVAAVDVKSKQTKLPKEPCSLNAKNGNTAAPATQKKALTA KTNKSKNSLKAQRPIQKYGSPGKASLAVVPPKKIHKCPEPTSTVEKLSLKKAPRKAFDLS QRSLDSLAELRNHGKSAGFMEAKKPKSKLISPQSILAQRNKKLLACQERQFYQQSRPKTS EKRKSSSSPKNSSKNAGMPTKQSGNSSGDRTSLSGQRIRAEKMKRPQKEPQGRGLVDVNK LYTSSSETRKDAESGGQPVVKLAPQSNSLGEDNAQSTMPVTAANTNDHKNDDDDDEEDDL FLTQTDPLDMDLCSQLEAEINVGTLQDLCTSGVVDHSPSVHQVTEGSKCSPEDCTEFVPV SSDNYPINAAPEKKDDHVFARPGLPLFLQKPLRPVTAKVYSAGTTSRTASLTKDLESLPK PLPNVKAKTQTSKPPVPRPTMQPPAQSKAPVSQTTSNVLKPLINQNNIPLQCTFNSVRGT GRNSLAAIRTPQRDQNWLVREVLHWSFEMFDNISQFGVSKKLCQLPLLKVRLEFSGYDEY FNTFCPLMLLNTFESLAQEWTVKQPALASHLCKLHLQNFCNESQMNRGEFQVWIRNVDLN MQRLPKEGDLVFLLVPEDTGSSPREESDLQGPPIYHTGHVSRFVRTQCTQAFEKEQYTLC ELTIHTYGNLLPYRKQQVRCAVIGSLITTLRQFKALIQLQRNPLFKPIIHPTPAGCIQTA LSGSIPAAVPISKEYNSDQRNAIEKANSMITQHPRLPRICMIHGPPGTGKSKTIVGLLYR ILMENNVPDLSFGAKNKRNRVLVCAPSNAALDDLMKKIILEFKEKCRDKKNTLGNCGDIN LVRLGAEKTISSDVVKFSLDCQVNYRIKRASQDPSVLRLKEALDRQLDELSRQRAMERCS KNTCEELDQRIARLTKERQCVANVLKEERRRPQEVKRNIILESHVICCTLSTSGGILLEA AFRQLGQEPFGCVIVDEAGQSCEVETLIPLLHRCCKLVLVGDPEQLPPTVISMKAEELGY GQSLMSRLCQILEASGSNTPVLQLTKQYRMHPDICLFPSKHFYNSVLRTDRDLSHAGKSD SVSPEVPPDLLLKCDFSRDRSFSNPLEIKMVVALIKLIKSKKKEFGFRNIGIITPYRAQK MKIINELKKTFGDNAMPGEVDTVDGFQGRQKDCIIVTCVRANSIQGCIGFLASRQRLNVT ITRAKFSLFILGSLRTLIENKDWNQLIQDAQRRGALVKTKQEHYQRDVNRILKLNPVIQR TASYPPTKPVEVHKGGSPYTPPLEAPERGNNNPPVSGGPPHKRTIAHPAVDVGRHQVEIC GIPDWHAGVKTQEVITQHHLVCNRVQIQTVPKATLISIFLHPQLQGSNDLHSLQADIHGQ ANHEMKA NT seq 7404 nt NT seq  +upstreamnt  +downstreamnt atgagcacctgtcgctggtgcacacctggaggttctgtcacggcagagctgctgaagagc tatgctgtcaaagagttaccaaatgaggattgtgtcggtgccaacgatgacctctcctac tgcatggagtgtgtggtggaataccacaaagccagagatgaggttccacagcttcacaag tctctgtggccattggaaacgtcgcggctcattgcacagctggagaatgcaatgcgggaa gagatcgaggacgacgatgagctctacttaattgaagacgatggagagaaacaactattt ggttacggtggctgcagttttgagagcgatgtccgggtgccactattggagatcctcaag tttccatatttgcttcttgacaaacgcattagtgaactcagtgttgaagccttgtgcaag atggaacaagtcaacaacacatttcaggtttatgaaaagcttcctggtgtctacctgctt ctagtacaccccaatgaaacgattcgccactgggccattttgactgccagagcacaggga aaggtggatcgggatgattactatgatttggaggaagttttcacctgcctctttaaggtc attgagcttggactgtttgaaaactcagacatttacatgtatactgaggtagaagatgga aagctgatccttttgccatcacatttgtacgacacctctaattacaagaactactggctg ggtatttgcatgttgctgacagtacttgaggaacaagccatggcctcgttgttgctaggg cctaacaagcagaatgattttatgcagtctattcttcacgttatggaaaagcaaacggaa gatgaaagcatcaaccctttttggcctgctcttcactgcttcatgaccatcctcgatcga ttgggttctaaagtttgggggcagctcattgatcccatccaggcatttcagaccatcata ggaagtcccagctacaacagcgaaattgaaatcatcaggaaaagctgtcagaggacaaca aagtgtgaacctgatttagacgatgatgactttgtgacatgcagccaggctgtgtacagt tttaatactgaaaaagtaaaaaaggaagctggatggaaaagtgcaatttgccccgactat tgccctaacatgtacgaagatatgcagagtcttgctaacatactccagtccgacattggg caagatatgcgtgtccacaatagcacgttcctgtggttcattccttatgttcagtctgtc atggaccttaaagacctaggggtggcttacatcatggaagtgattcaccacctttcctca gaaataaaggtcgtctttactcagggaaccaatcagtgcgacaaagtgacagaatttttt gtcagggtcttggtttctgtcattgaactacatcgaagtaaaaagtgccttcatttcctg tatatcagctcacacaagtgggttgacgcaattgtcaagtgtgccctgcttccagtcaag agccccagaattacatcaacctcagcattgtcttcctcccccacttctcagactccttcc tctgttcaatttgcttgcatgcagttaattaggagccttttgcgagaaggctatccgctg ggacagcaggcagcttgcaaacaatatttagacaaattcaacctaattatcagaggaaat gtactcagaaacttagatcttagcaagtctgaggttcaaggattgcaaacctgtctcact caaatcattaaaaatattaaggacaaggaatccagcattcctagttctcctgctgatcca aacccagcaagcctggcccaggctgtaccctttattaagaccgaaagaatcgatgatgag tgttgtggagccaacattacatctccgtatagctctgatgttcctgtttatcccttggaa cgtagggaagtattaaaatgtcaaattaaaaaggagccacctgatgaaaggaggacagat gtggagtataattcttatcttcctagctgtagttcacgcttcaagacacaaattaaaaat gaaaagttagatgatacaagtactttaatttcggcccgggaggaaccaaaaaaactactg acaggatggcaatccaaattatctgaagtcatggcaaaagtgccaaatttgaagccaaac gcaacaagtgtagagactgaaagtaaaataagcactattgagggtagcaccaagccagca caaaagccatgttatgcgacaatagaagagcagacggatttgttgctaaaagtaaaaagt tatggtaaggaaagtgaatcaggtgatttaagcgacagtgatgataacatacctttgaca ttgttttcaaaaaaacatctggacaaaaaacagagcgttaccgacaatgttccagtaagt gagcaacttcagaggctgtctttggacaacaacccagcaggccggcccataaagaaagaa tttcaaggagtcgctgacatcagcgcttccagctttctagaaagcaataccgattgcata atggacagtgaaacagatgatgatgatgcgcttcccttgtgttttgttaaagaaaagctg atgaaaagttccaaaaagtcagctcttgcaaacactaaaatgaatcgtaattctgatcac acagaagtggtggcacagaccaaaggttcaaatttccctgatgattcaattcggcaggca tgtgatgtacctgatttttgttctataaagaggaaagtaatagggtccagcagagctctt ggggatgagaatgtttcctgtaaaacggaattatctgatatcataaccatctcggatgac tctgaccaggaagaagaacctttctgcaaatctgttaaaatagaaaaacaagaccccggt caagatactaaagaaagtccaatacagagaacagaacaagttgagtttgagcctgttgat ccaaattttgaagagtatggttcacaggttttcgaatttgaaacacaggatgatatatat tctgcatggagtgactcgcagttggaggagaagaagcctaatgttcaagaaaatctatcc tccaggccagaaaccagcaatattgagaactttgaccaggacaatgatttaaataagtgg gggtatgacacggactacgtttctgatgaaataatagaaaaggcagccgaagatgcagag cagcaatttaaagcattaacctctgctgcaaacattaaatctggaagggagcatggtggt aataaatcacctcatgaggctgttaattccagcgtatcttttggaaagagatctcatgag tttgttgctgctgtggatgttaaaagcaagcaaaccaaattgccaaaagaaccatgttct ttaaatgccaagaatgggaacacagcagctccagcaacacaaaagaaagcactaactgcc aaaacaaacaaatctaaaaactctttaaaagcacagagacctattcagaagtatggaagt ccaggtaaagcttcccttgctgtggtcccaccaaagaaaatacacaaatgtcctgagcca acctcaactgttgaaaagctaagcctcaaaaaagctccccgcaaagcttttgatctgtcc cagagatcacttgacagtttggctgaactacggaatcacggcaagtctgcagggttcatg gaggccaaaaagcctaaatcaaagcttatttcaccacagtccattttagcacaacgtaat aaaaagttgttggcttgccaggaacgacagttttatcaacagtccaggcctaagacttcg gagaaaaggaaatcgagtagtagtcccaaaaacagtagcaaaaatgcaggtatgccaact aagcaaagtggaaacagttcaggggatcgaacctctctttcaggtcaacggatcagagca gagaaaatgaagaggccccaaaaagaacctcagggacgtggacttgtggatgtaaataaa ctttatacgagtagctctgaaacacgtaaagatgctgaatcaggtggccaacctgtggtg aagttagcgccacaatctaattctctaggggaggacaatgctcagtctacaatgccagtt actgcagctaatactaatgatcacaaaaatgatgatgatgatgatgaggaagatgacttg tttttaacacagacagatccacttgatatggatttgtgttcacagttagaggctgaaata aatgttggcacacttcaagatttgtgtacgtctggtgtggttgatcattctccatcagtt catcaggtgactgaagggtcaaaatgcagtcccgaggactgcacagagtttgtcccagtt tctagtgataactaccctataaatgctgcacctgagaaaaaagatgatcacgtgtttgcc agacctggtttgcccctttttcttcagaaaccgctcagacctgtcactgctaaagtttat agtgctgggacaacctctcgaactgccagcctcacaaaagacctagaaagccttccgaag ccccttcctaatgttaaagctaaaactcagacttcaaaaccgcccgtgcctagaccaact atgcaaccgcctgcccaaagcaaggcaccagtgtctcagactacaagcaatgtgctgaaa ccgctgatcaaccaaaacaacatccccctacagtgcactttcaactctgttcgaggaact ggaaggaattctcttgctgctattcgaacaccacaacgggaccagaactggttggtgcga gaggtgctgcactggagttttgaaatgtttgacaacatttcacagtttggggtctccaaa aaactctgtcagttgccgttgttaaaagtacgacttgagttttcaggttatgatgaatac ttcaacaccttttgcccgctgatgctcctgaacacgtttgaatcgctagcacaggaatgg acagtaaaacaacctgcacttgcttcccacttgtgtaagctccatttgcaaaatttctgc aatgaaagccagatgaatagaggcgaattccaggtctggattcgaaatgtggatttgaat atgcaacggctgccgaaagaaggtgatcttgtattcctgctagtgccagaggatactggc tcctcacccagagaagagagcgatttacaaggacctccaatttaccacactgggcacgtg tcacgcttcgtgcgcacccaatgcacacaggcctttgaaaaggaacagtacacgctgtgc gagctgaccattcacacctatggaaatcttttgccgtaccgcaaacagcaagtacggtgt gcagtgattggcagcctgataaccactctgagacagtttaaagcgctgatccaactgcag aggaaccctttatttaagcccattatccaccctacccctgctgggtgcatccagacagca ttgtcgggatccattccggctgcggtacccatctcgaaagagtacaacagcgaccagaga aacgctattgagaaggccaattctatgattacacagcacccccgattgcccagaatatgt atgatccatgggccccctggcactgggaagtcaaagactattgttggcttgctctataga attctcatggagaacaacgttcctgatctgagctttggtgccaagaacaagagaaacaga gtacttgtgtgtgccccgtccaatgctgccctggatgatctgatgaagaagatcatattg gagttcaaggaaaaatgtcgcgacaagaagaatactctgggaaactgtggtgacattaac ctggtcaggctgggggcagaaaaaaccatttcctcggacgttgtgaaatttagtttggac tgccaagtgaattacagaatcaagagagcttctcaggatccctctgtgctcaggctgaag gaagcattggacagacagcttgatgaattatcccgtcaaagagctatggagaggtgttcc aagaacacgtgtgaagagttggatcagagaattgccaggctgacaaaggaaaggcagtgt gtagccaatgtgctaaaggaggagcgtaggcggccccaggaagttaagcgaaatatcatt ctggagtctcacgtcatctgctgtacactgagtactagtggcggcatccttctggaagca gccttccggcaactgggacaggagccattcggctgtgtcatcgtggatgaggcaggacag tcctgtgaagtggagacgctcattccgctcctccaccgatgttgtaaattagtgctagtg ggagacccagaacagcttccaccaactgttatatcgatgaaagcagaggaactaggctac gggcaatctttgatgtctcgactctgccaaatcctagaagcctctggcagcaatactcca gtcctacagctgacgaaacagtaccgtatgcaccctgatatttgcctctttccatccaag cacttctacaattctgtactgagaactgacagagatctttcccatgcaggaaaaagtgac agtgtctctccagaagtcccccctgacctccttctgaaatgtgatttttctcgggacaga tccttctccaacccactggaaatcaaaatggtggtggccctaataaagcttattaaaagc aagaaaaaagaattcggtttccgaaatattgggattatcaccccgtaccgggctcagaaa atgaagatcatcaatgaactcaagaaaacttttggtgataacgcaatgccgggtgaagtg gacacagtggacggttttcaaggtcgacaaaaagactgtatcattgtcacatgtgtacgg gccaactcgatccaaggctgtattggatttttagccagtagacaacgtttgaatgttact atcacaagagccaaattcagcctgttcatcttagggagcctccgaacactgatagaaaac aaggactggaaccagttaatccaggatgcacagcgcagaggagctcttgttaaaacaaag caagaacattaccagagagatgtgaacagaatactgaagttgaaccctgtaatacagagg actgcttcttatcctcccactaaacctgtagaagtacacaaaggtggttcaccctacacg cctccattggaagcaccagaaagaggcaataataatccaccagtgtctggaggcccacct cacaagaggactatagcacacccagctgtcgatgttggcaggcatcaagtggaaatttgc gggatcccagactggcacgccggcgtgaagacacaagaagtaataacgcaacatcatctg gtctgcaacagagttcagatacaaaccgttcccaaggccactcttatcagcattttcctt catcctcagttgcaggggtcaaacgaccttcacagccttcaggcggacatccatggtcag gccaaccacgaaatgaaggcctag

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