Nanorana parkeri (Xizang Plateau frog): 108794796
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Entry
108794796 CDS
T04897
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03082
ATP-dependent chromatin remodeling
npr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108794796 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108794796 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npr01009
]
108794796 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npr03021
]
108794796 (SMARCB1)
03036 Chromosome and associated proteins [BR:
npr03036
]
108794796 (SMARCB1)
Protein phosphatases and associated proteins [BR:
npr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108794796 (SMARCB1)
Transcription machinery [BR:
npr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108794796 (SMARCB1)
SWI/SNF complex
108794796 (SMARCB1)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108794796 (SMARCB1)
PBAF complex
108794796 (SMARCB1)
SWI/SNF complex
108794796 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
108794796
NCBI-ProteinID:
XP_018421400
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MIMALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERK
KIVASSHGKKYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLRSQRCCK
QPPIKIIDCMQVCAGNCVKLGLLMDKDSLRPGGVSNSLVFFLLLYSFDDHDPAVIHENAS
QPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAI
RQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSEL
GLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEM
EKKIRDQDRNTRRMRRLANTAPAW
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgattatggcgctaagtaaaacgtttggtcagaagccggtgaaatttcaactggaggaa
gatggggagttctacatgataggttcagaggtagggaattacctgcgcatgtttagaggc
tcgctgtacaaaaggtatccttctctctggagacgcttggccaccgttgaagaaaggaag
aaaattgtagcctcctcacatgggaagaaatatcatggatacacaacattagctactagc
gttaccctactgaaagcttcagaagttgaagagatcctagatgggaacgatgagaaatat
aaagctgtttccattagcacagaacctccaacctacctcagaagccaaaggtgctgcaaa
cagcctcccataaaaatcatagactgcatgcaggtttgcgctggtaattgtgtaaagctg
ggtttgcttatggacaaagacagcctgcgtccaggtggtgtgtccaattcactggtgttt
tttttactcctgtacagttttgatgaccatgatccagctgtgattcatgaaaatgcttct
cagccagaagtactagttccaatccggttggacatggagatagatggacagaagttgcgc
gatgccttcacatggaacatgaacgagaagttaatgactccagaaatgtttgcagagatc
ctctgtgatgatttagacctcaacccccttgcttttgtcccagctattgcttcagcgatc
cgtcagcagatcgaatcttaccccactgacagcatactggaggatcagtccgatcagaga
gtcattattaagctgaatatccacgttgggaacatttctttggtggaccagtttgagtgg
gacatgtcagagaaggagaattcaccagagaagtttgcactgaaattatgttctgagctt
ggtttgggcggggagtttgtcaccactatcgcatacagcatccgagggcagctcagctgg
caccagaagacatacgcattcagtgaaaaccccttgccaactgtggagattgccatccga
aatacaggtgatgcagatcaatggtgccctcttctggagacccttacagatgctgaaatg
gaaaagaagatccgtgaccaggacagaaacaccaggcgtatgagacgtcttgccaacact
gcaccggcctggtaa
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integrated database retrieval system
