Nanorana parkeri (Xizang Plateau frog): 108794858
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Entry
108794858 CDS
T04897
Symbol
SMO
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108794858 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
npr04030
]
108794858 (SMO)
G protein-coupled receptors [BR:
npr04030
]
Frizzled / Smoothened family
108794858 (SMO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
108794858
NCBI-ProteinID:
XP_018421483
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MSSSMVLWICWIAGIFYSFFMSASGEIHFNESLYMDRCKKTTTCESLKYNICLGSALPYA
FTSTALAEDSLSQEEVHDKLLLWSGLRNAPRCWEAIQPLLCAVYMPKCEGGKVELPSQGL
CQATRGPCAIVERERGWPDFLKCTTDRFPEGCPNEVQNMKFNSSGQCEAPLVRTDNPKSW
YEDVEGCGIQCENPLFTQKEHREMHVYIAIFSSVTIFCTFFTLATFLSDWKNSNRYPAVI
LFYVNACFFMGSIGWLAQFMDGARNEIVCRGDGTMRLGEPTSNETLSCVIIFVIVYYSMM
SGVIWFVMLTYAWHTSFKALGTTHQPLSGKTSYFHLVTWSIPFVLTVAILAVAQVDGDSV
SGICFVGYKNYRFRAGFVLAPIGVVLIVGGYFLIRGVMTLLSIKSNHPGLLSEKAASKIN
ETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFREYVLCEANVTIAAQTNKPIPE
CEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATIIIWKRAWCRILGRSDDEPKRIKKS
KMIAKAFSKRKELLNNPERELSFSLHTVSHEGPVAGLNFDINEPSADMSSAWAQHVTKMV
ARRGAILPQDVSVTPVATPVPPEERENVWLVEADNHYGLEKKTKKKKRRRKKEIRLVDER
KGIENYNARASTAVPRLPKLPVKPNLVTRAVEPQEFEQALPGSYREYRRWPPITGGLYHM
DNMDDHLGYKKYTHTNCISHPYSTDELPIAQQSGVQFIPHPRRDGIFQYSNGNLPSYATR
HGPCNDRTQTRRAEIPPMHSRANLMDAELMDTDSDF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctccatggtgctatggatctgctggattgcggggatcttctacagcttcttc
atgtctgcatctggagagattcactttaacgaatccctgtacatggataggtgcaagaag
accaccacttgtgaatccctcaaatacaacatttgccttggatctgctttaccctatgcc
tttacttccactgccttggctgaggattccctttctcaggaagaagttcatgataaactg
ttgctttggtctggcttaaggaatgccccacgttgctgggaggccatacaacctctacta
tgtgctgtgtacatgccaaagtgcgaaggaggcaaagtagagcttccaagtcaaggccta
tgtcaggctacacgcggcccctgcgccattgtagagcgggagaggggctggccagacttt
ctaaagtgcaccacagatcgcttcccagagggctgtccgaatgaggtgcaaaacatgaag
tttaacagctccgggcagtgtgaggctcccttggtccgcacagataaccctaaaagctgg
tacgaggatgtggaaggctgtggcattcagtgtgagaatccactgtttacccagaaggag
catcgagaaatgcatgtctacattgccatattcagttcagtcaccatattctgtaccttt
tttacactggccacatttctctcagactggaaaaactctaaccgctaccctgctgtgatt
cttttttatgtcaatgcctgctttttcatgggcagcattggatggcttgctcagtttatg
gatggtgctcgtaatgaaattgtttgtcggggagatggcaccatgaggcttggcgagccc
acgtcaaatgagactctctcttgcgttattatttttgtcattgtttactactccatgatg
tcaggagtgatctggtttgttatgctgacatatgcttggcatacctcctttaaagccctg
ggtaccactcaccagcccctctctggcaagacttcatacttccacctggtcacgtggtct
attccctttgtcctcacagtggccatccttgcagtggctcaggttgatggcgactctgtg
agcggaatctgctttgtcgggtacaagaactaccgcttcagagccggctttgtgctggct
ccaattggagttgtgctaattgttggaggttattttttaatcagaggcgtaatgacattg
ctttctatcaagagtaatcaccctgggctcctgagcgagaaagcagctagtaaaataaat
gaaaccatgttgcgactaggaatatttggattcttagcctttggttttgtactcatcacc
ttcagctgtcatttctatgacttcttcaaccaggcagagtgggagagaagtttccgtgaa
tatgtcctgtgcgaggccaacgtgactattgctgctcaaacaaataagcccattcctgag
tgtgaaataaagaacaggcccagtcttctggtagaaaagattaacctctttgccatgttt
ggcactggcatagccatgagcacatgggtgtggaccaaagcaaccattatcatctggaag
agagcctggtgcagaattttaggtcgcagtgatgatgaaccaaagagaatcaagaaaagt
aaaatgattgcaaaggcattttcgaagaggaaggagttgcttaataaccctgaaagggaa
ctgtccttcagtcttcatacagtgtcccacgaaggaccagttgcgggtcttaactttgat
attaatgagccatcagctgacatgtcgtcggcatgggcacagcatgtcacaaagatggtt
gccaggagaggagccattttacctcaagatgtttctgtgactcccgtggcaactccagtg
cctcctgaagagagagaaaatgtatggctggtagaggcagataatcattatggactggag
aagaaaactaagaagaagaaaaggagaaggaagaaagagatcagattagtggatgaaaga
aaaggcattgaaaactataatgcaagggcttcaacagcagtacctcgtctcccaaagctt
cctgttaagcccaaccttgtgaccagggcagtggaaccccaggaatttgaacaggccctt
ccaggatcctacagagaatataggagatggcctcctattactggaggattataccacatg
gataatatggatgaccaccttggatacaaaaaatacactcataccaattgtatttctcac
ccttactccactgatgagcttcctatagctcaacagagtggagttcaatttatccctcat
ccaaggcgtgatggcatattccagtactcaaatgggaatctcccgtcatatgccacaaga
cacggtccctgcaatgacaggactcaaactagaagagcagagattccccccatgcattcc
agagcaaaccttatggatgctgaactcatggacacagattcagatttctag
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