Nanorana parkeri (Xizang Plateau frog): 108795224
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Entry
108795224 CDS
T04897
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03013
Nucleocytoplasmic transport
npr03015
mRNA surveillance pathway
npr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108795224 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
108795224 (CASC3)
03015 mRNA surveillance pathway
108795224 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108795224 (CASC3)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108795224 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Dicty_REP
SSP160
Motif
Other DBs
NCBI-GeneID:
108795224
NCBI-ProteinID:
XP_018421933
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MADRRRRRRRASQDSEEEEEESGSESAGSVEQPGLPAKIETREVVETVREGDKSECESED
GIEGDAVLSDYESAEESEVEAGHVSEEEPLKATLKPESNAAETTTTTTTTTTPPTAPTKE
EKLKTKESVTGERQSGDGQESTEPDEVKASRKSQKQLDDDEDRKNPAYIPRKGLFFEHDL
RGHTNDEEVRPKGRHARKLWKDEGRWVHDRFREDEQAPKSRDELISMYGYDIRSSKNPEE
IRPRRPRKPRYSSPSRREEEEEEEEKPIRQSNRYYDSNSVPPPRTYNNRSVPSKDRALSN
RTYSRPGGYKENRPVNYPPENIVSPPPTFERRQEYAGYRTRSVEQAPLPPNEESSELGIP
HKAEPANEKPAADPSPPPPPPDRPVEKKSYSRARRSRIKGGEAGKSIDDTTFPDLPPPPP
PQMPTEVVPEPSPPIPVVKTGGWEPSVDGGLTGLEQDLSQVNISEQNWTPGQSPYVSTRG
IPNHIHMPGGPPQYGRMEGMAVQSGRVKRYSSQRQRPVPDPAPMHISLMEGHYYDPLQFQ
GPIYTHGDGPSTLPPQGMLVQQEMHLPHPGLHPHQSPAPMPTPNLYPAPVSIPPGQPPPQ
QLLPPPYFTAPPGVINFGNPAYPYPPGALPPPPPTHLYPNPQAQPQVFGGVTYYNPVQQQ
VQPKPSPPRRTSQPVTIKPPPPEENRNLKMTKEKASS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcggataggaggcggcggaggagacgcgcgtcccaggacagtgaggaggaggaagaa
gagtccgggagcgagagcgcagggtctgttgaacaaccgggcctgcctgccaaaatcgag
acccgagaggtcgtggagacagttagagaaggcgacaagtccgagtgtgaaagcgaggat
ggtattgaaggcgatgccgtgctatcagactacgaaagtgctgaggagtctgaagtggaa
gctggtcacgtcagtgaggaggagcccctcaaagctaccttaaaaccagaaagcaatgct
gccgagactaccaccaccaccaccaccaccaccactccccccactgcccccacaaaagag
gaaaagcttaagacaaaggaatcagtgacaggggagcgtcaaagtggagatggacaggag
agtacagagcctgatgaagtcaaggcctctaggaagagtcagaagcagttggatgacgat
gaagaccggaagaatcctgcatacatccctcgtaaggggctcttctttgaacacgatcta
cgtggccatacaaatgatgaggaagtcaggccaaagggacgccacgcacgcaaattgtgg
aaagatgaggggcgctgggtgcatgatcggtttcgggaggatgagcaggctccgaagtct
agggatgagctgatttccatgtacggttatgatattcggtccagtaaaaacccggaggaa
attcgcccccgtcgaccaagaaaaccaagatactccagcccctccagaagggaagaggag
gaggaggaagaagaaaagccaatcaggcagtcaaaccgttactatgattccaattctgtc
cctccaccccgaacctataacaatcgcagtgtccctagcaaagacagagctctctcaaac
aggacctactcgcggccaggtgggtacaaggaaaatcgcccggtcaattacccacctgag
aacattgtttcgccaccgcctacttttgagcgaagacaggaatatgcaggttacagaacc
cggagcgtagagcaagcgccactgccaccaaatgaagaatcctccgaattaggaattcct
cacaaagctgaaccggcaaatgagaaaccagcagctgatccatcaccaccaccaccgcca
cctgatcggcctgtggagaaaaagtcctattctagagccaggaggagtcggattaaaggt
ggggaggctggcaagagcatagatgacactacattccctgacttgcctcctccccctccg
ccacagatgcccactgaggtggttccagagccttccccaccaatacctgtagtgaaaact
ggtggctgggaaccttcagtagatgggggtttgactggactagagcaggacctgtcccag
gtcaacatttcagaacagaattggacccctggacaatctccatacgtttcaacacgtggt
attccaaatcacattcacatgcctgggggacctccgcagtatggccgcatggagggaatg
gcagttcagagtggccgtgtcaagaggtattcctcccagcgtcaaaggccggttccggat
cctgctcccatgcacatcagccttatggaaggtcattactatgatccactccagttccag
ggaccaatatatactcacggtgatggcccttccactttgccccctcagggcatgcttgta
cagcaagaaatgcaccttccccacccaggtttacacccgcaccagtctcctgcccccatg
cctaccccaaacctttaccctgcaccagtctctattcctccaggtcagcctcccccccag
cagctgctaccccctccgtacttcaccgctccccccggagtcattaattttggcaaccca
gcctacccttatccccctggagcattaccccctcctccaccaactcatctctaccccaat
ccacaggcacaaccccaggtgtttggaggagtgacatattataaccccgtacaacagcaa
gtgcagccaaaaccttccccgccccgacggacttcacagccagtcactataaaaccacct
ccaccagaggaaaatagaaacttgaagatgacaaaagagaaggcgagttcctga
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