Nanorana parkeri (Xizang Plateau frog): 108795331
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Entry
108795331 CDS
T04897
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03082
ATP-dependent chromatin remodeling
npr03083
Polycomb repressive complex
npr04110
Cell cycle
npr04330
Notch signaling pathway
npr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108795331 (HDAC1)
03083 Polycomb repressive complex
108795331 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108795331 (HDAC1)
04350 TGF-beta signaling pathway
108795331 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108795331 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npr03036
]
108795331 (HDAC1)
Enzymes [BR:
npr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108795331 (HDAC1)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
108795331 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
108795331 (HDAC1)
BRAF-HDAC complex
108795331 (HDAC1)
REST complex
108795331 (HDAC1)
SHIP complex
108795331 (HDAC1)
MiDAC complex
108795331 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108795331 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
108795331 (HDAC1)
Chromatin remodeling factors
NuRD complex
108795331 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
108795331
NCBI-ProteinID:
XP_018422066
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MAYTQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
SVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMTKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFMKTFNLPLLMLGG
GGYTIRNVARCWTFETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAVQDDSGDEDDDDPDKRISIRSSDKRIACDEEF
SDSEDEGEGGRRNVANFKKAKRAKTEDEKDGEDKKDIKEEDKLKEEKPEAKRVKEETKTA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatacacaaggaacaaagaagaaagtgtgctattactatgatggggatgttggc
aattattattatgggcaggggcatccaatgaagcctcacaggatccgtatgacacacaat
ctgctgcttaattatggattgtacaggaagatggaaatctatagaccacacaaagccagt
gctgaagaaatgacaaaatatcacagtgatgattacatcaaatttctacgttccatccgg
ccagacaacatgtctgaatacagcaagcagatgcaaagatttaatgttggcgaagactgt
cctgtgtttgatggtctctttgagttctgccagttgtcaacaggaggatctgttgcaagc
tctgttaaactaaacaagcagcaaacggacattgctgtaaactgggcaggtggacttcat
cacgccaagaaatctgaagcctctggtttttgctacgtcaatgacatagtgcttgccatt
ttggaactgcttaaatatcatcagagagtgctgtacattgatattgatattcatcatggt
gatggtgtggaagaagctttttacaccacagacagagtcatgactgtttcttttcataaa
tatggagaatattttccaggaactggggacctgagggacatcggggctggaaaaggtaaa
tactatgcagtgaactacccattgcgagatggtattgatgatgaatcctatgaagccata
tttaaaccggtgatgactaaggttatggaaatgtaccagcccagtgctgttgtcctgcag
tgtggtgcagattcactttctggggacagacttgggtgctttaatctaactatcaaagga
catgctaaatgtgtggagtttatgaagaccttcaatttaccactgctgatgttaggtggt
ggtggctacacaattagaaatgttgcccgctgttggacatttgagacagctgtggccctg
gacacagagatacccaatgagcttccatacaatgactattttgaatactttggccctgac
ttcaaacttcacatcagcccttctaatatgacaaaccagaacacaaatgagtacctggaa
aagatcaagcaaagactgtttgagaatctacgtatgcttccccatgcgcctggtgtacag
atgcaggcaattcctgaggatgctgtgcaggatgatagtggtgatgaagatgatgatgat
cctgacaagcgcatttccattcgatcttcagataagagaattgcatgtgatgaagaattc
tcggattctgaggatgagggtgagggaggacgtaggaatgttgccaatttcaaaaaggca
aagcgtgccaaaacagaggatgaaaaagatggcgaagataagaaagatatcaaagaggag
gacaagctaaaagaagaaaagccagaagctaaacgggtaaaagaagagaccaaaactgcc
tga
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