Nanorana parkeri (Xizang Plateau frog): 108795431
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Entry
108795431 CDS
T04897
Symbol
TAF6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108795431 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npr03021
]
108795431 (TAF6)
03036 Chromosome and associated proteins [BR:
npr03036
]
108795431 (TAF6)
Transcription machinery [BR:
npr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108795431 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
108795431 (TAF6)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108795431 (TAF6)
STAGA complex
108795431 (TAF6)
TFTC complex
108795431 (TAF6)
SAGA complex
108795431 (TAF6)
SLIK complex
108795431 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Bromo_TP
TFIID-18kDa
Motif
Other DBs
NCBI-GeneID:
108795431
NCBI-ProteinID:
XP_018422180
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MAEGKKIGNALLPSESMKVIAESIGVSQMSEETCQLLTQEVSFRIKEVTQDAMKFMHVGK
RQKLTPNDIDAALKLKNVEPIYGFHAKEFLPFRYASGGGRELHFYEEKEIDLCDIISTPL
PRVPLDVSLKAHWLSIEGVQPAIPENPPPVPKEQQKMEATEPLKAAKPGQEEAGLKGKGQ
GANAVEGKGKEKKNTIIEGTPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQ
SIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHEL
IPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTKSLV
DDRTPWTTRYGSIAGLAELGPDVIKTLIVPRLSVEGERLRAVLEGPVIANIDKIGADHVQ
SLLLKHTAPVLVKLRSPPDVPEAYRTDYAFLGPTLCSHVMKARAQSALQGPQVNRTTLTV
TQPRPTLTLSQPSSGSITPSPRTPGIIKVPGSLTLPVQTLMSARPATPSQPSPPPTKFIV
VSSAGSSGTQVLTSSSGPSPSTTCPPGVQPIVKLVSGGQSSVVGGSATGGSSGMQKYIVV
SLPTAGESKTPQPSPPPTETSGL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggaagaagatcgggaacgctctcctccccagcgagtccatgaaagtgatt
gccgagtctataggagtgtcgcagatgtcagaggagacctgccagctgctcacacaagaa
gtcagcttccggataaaggaggtcactcaggatgctatgaaatttatgcatgttggcaag
aggcagaaactcacccccaatgacattgacgccgctctgaaactgaagaatgtggagcct
atatacggtttccatgctaaggaatttctgccgttccgctacgccagcgggggagggcgg
gaacttcacttttatgaggagaaagagattgatctgtgtgatataatcagcaccccactt
cctcgagtgcctctggatgtctcattgaaagctcattggttgagtatcgaaggagttcag
ccggccattccagagaatcctcctccagtcccgaaggagcagcagaagatggaggccact
gagcccttgaaagctgccaagccaggacaagaggaagcagggctgaaagggaaaggacaa
ggggcaaatgctgtggagggtaaaggtaaggagaagaagaacaccattatagaaggtacc
cctctgaagctaaagccacgcagcatacatgaactgtccgtggaacagcagttgtattac
aaggagatcactgaggcctgtgttggttcttgtgaagccaagagagcggaagcactacag
agtattgccactgaccctggcctgtaccagatgcttccccggtttagcactttcatatca
gaaggggtgcgagtgaatgttgtacagaataatctggcgttgcttatttatctcatgcga
atggtaaaagctctgatggacaaccccacgctgtacctggagaaatacctacatgaactc
atcccagccgtgatgacgtgtatcgtcagccgacagctttgcctgcggccagatgtggac
aatcactgggcattaagagactttgccgctcgtctcatcgcacagatctgcaagaacttc
agcactacgaccaacaacatccaatccaggataaccaaaacgtttaccaagagtttggtc
gacgatcgcactccctggaccacccgatacgggtccatcgccggtcttgcagaactggga
cccgatgtcatcaaaactctgatcgtcccgcgtttgtcggtggaaggagagcgactacgt
gcggtcctagaaggtccggttatagccaacatcgacaagattggggccgaccatgttcaa
agcctcctgctgaaacacacagctccagtcctggtgaaattacgctcccctccggatgtc
ccagaggcataccgtactgattatgccttcctgggtcccactctgtgctctcacgtgatg
aaggctagggcccagagtgctttgcaggggccccaggtgaaccggactactctgacagtc
acacagcctcgtcctacactcaccctctctcagccgtcctccggctccatcacgccatcc
cctcgtacaccagggataattaaggtgcctgggtccttgactttgcccgtacagacctta
atgagtgcccggccggccaccccttctcagccttcaccaccacccaccaagttcattgtg
gtgtcttcagccgggagcagcgggacccaggttctgacctcttcaagcggcccttcccca
tccacaacgtgcccccctggagtccaacccatcgtcaaacttgtgtccggcggtcagagc
agcgttgtggggggctcagcgaccggtggcagcagcggaatgcagaaatatatagtggtg
tctcttccaaccgctggagaaagcaaaaccccccaaccctcccctccccccacagagact
tccggcttgtga
DBGET
integrated database retrieval system
