Nanorana parkeri (Xizang Plateau frog): 108795466
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Entry
108795466 CDS
T04897
Name
(RefSeq) protocadherin alpha-C2-like isoform X1
KO
K16493
protocadherin alpha
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
108795466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npr03036
]
108795466
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
npr04515
]
108795466
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
108795466
Cell adhesion molecules [BR:
npr04515
]
Cadherins
Protocadherins
108795466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
PSI_induc_2
Motif
Other DBs
NCBI-GeneID:
108795466
NCBI-ProteinID:
XP_018422221
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MAFTRRCVGLISLALLTLVNVVTGQLRYSVREELNHGAFVGNVINDLGLDLKQLPTRSFS
ITSGNNQQYFDVNLGNGVLFVNRTIDREALCPPNAPCVINLGVVIGNPVEVHNIEVEILD
INDHAPRFPRNEYYLNISESAMPGARFPIESALDPDIGSNSIQTYKLNDNNYFALDLKTF
NGNSKLIEIVLKKSLDREQRSLHQLVLTAIDGGNPAKSGTAQILVYVMDTNDNNPFFDKS
TYKASLLENSPTGTLVVKLNASDPDEGSNGEVAYSFSGYTPQKVRQLFTLDAKSGEVRVN
GPLDFEKSSSYEIYVQATDKGPVPMAGHCKVLVEIIDANDNAPEIVVTSNYSPVAENSQE
DTVVALMSVTDQDSGINKEVSLTIQQYLPFKLKSFKNTYKLVTDGKLDREKCPSYNITVT
ATDSGNPPLSSQKTLYVEISDVNDNPPVFEESSYSMYVLENNAPGVSLFSVKAMDPDSNE
NAFVSYMLLQGDAEGLPISSYVSVKSDNGTIYAVQSFDYEKLREFRFVVQAQDAGNPPLS
SSATVYVFVVDQNDHAPTILYPIPTNVSKSIELIPRAANADYLVTKVIAVDSDSGQNAWL
FYNLGKSTDPKLFKVDLHTGEIRTTRKVADDSITSYNLTVIVRDNGEPPLSSSSTISVAV
VDRISNIFPDSHRQVKNTTSYSEMTIYLIIALCSISFVFLLTLIVIFILKCCKCTCTAEP
CCTGCCTACCVVQNPNPADTYKQANNNIETRLPPGLTVQPNFIEVRGNGSLTKTYCYKAC
MTAGSGSDTFMFYNTGVPVGTMPHAVIADRNLTAQSGQRHSLIILKSETTTPVEPKHPNP
DWRYSASLKAAMQGAVHMEGAAVLRGAAVGLEQQWPTVSSATPVPEGGEVSPPVGAGVNC
NSWTFKYGPGNQKQQVPQIPPDFPENFIIPGSPAIISIRQDQPSAQAHKSNFITFGKKEE
TKKKKKKKKGNKNQEKANNNAADNNDQ
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggctttcactaggaggtgtgtagggctgatctctctagccctccttacgctggtgaac
gtggttacagggcagcttaggtactcagtaagggaggagttgaatcatggggcttttgta
ggcaatgtgatcaatgacttggggctagacctcaagcagttgcccacacgaagcttcagt
ataacatctgggaataaccaacagtatttcgatgtaaatctagggaatggagtcttattt
gtaaatagaacaatagatcgagaagcactttgccccccaaatgccccttgtgtaataaac
ctgggggttgtcatagggaaccctgtggaggtgcacaacattgaggtagagatattagac
attaacgaccatgcccccagatttcctagaaatgaatattatttaaatatcagcgagtca
gctatgccaggagctaggtttcccattgagagtgcactggatcctgacataggaagcaat
tctattcagacttataaactaaatgacaataattactttgctctggacctaaagacattt
aatgggaatagtaagctgattgaaatcgtgctgaaaaaatcattagacagagaacagaga
tctcttcatcagctggttcttacagctatagatggtggcaatcctgcaaaatctggcaca
gcccaaattttggtatatgtgatggacacaaatgataacaatccattctttgataagtct
acatacaaagccagtctgctggaaaattcacccacaggtaccttagtggtcaagctaaac
gcatctgatccagatgaaggatcaaatggggaagttgcatattcattcagtggctataca
ccacagaaagttaggcagttatttactctagatgcaaaatctggggaagttagagtgaac
ggcccattggactttgaaaagtcatcatcttatgaaatatatgttcaggccactgataaa
ggtccagttcctatggcaggacattgcaaagtgttggtggaaataattgatgccaatgac
aatgccccagagatagttgtgacttcaaattattctcctgttgctgagaactcacaagaa
gacaccgttgtggctttaatgagtgtaactgaccaagattcaggcatcaacaaagaagtt
agcctaacaattcagcaataccttccatttaaattaaaatcatttaaaaatacttataaa
ctggtgactgatggtaaattggatcgagaaaagtgcccttcttacaatatcacagtgaca
gctacagactctggaaatccaccactgtcatctcagaaaacactctatgtggaaatctca
gatgtgaatgacaaccctccagtatttgaagagtcatcttactctatgtatgttttggaa
aacaatgccccaggagtatccctgttctctgtaaaagccatggatccagattccaatgaa
aatgcatttgtttcgtatatgcttctacaaggagatgctgaaggcctccccatttcttca
tatgtttctgtcaaatctgacaatggaactatatatgcagtccagtcatttgactatgaa
aaactaagggaatttcgctttgttgttcaagcacaagatgctggaaaccctccacttagc
agctcagctactgtatatgtttttgttgtagatcaaaatgatcacgcgccaacaattttg
tatcccatccctacaaatgtttcaaagtctattgagttgattccacgagcagcaaatgct
gactaccttgtcacaaaagttattgcagttgactctgactcagggcaaaatgcctggttg
ttttataacttaggcaaatccacagatccaaaactttttaaggtggacttgcatacaggg
gaaataaggactacgaggaaagttgcagatgacagtattaccagctacaacctgactgtt
attgtaagagacaatggggaacctcctctttcctcttcttccactataagtgtggctgtt
gtggacagaatttcaaacattttccccgactcccatagacaggttaaaaataccacaagc
tactctgaaatgactatttatttgataatagctttgtgctctatttcttttgtatttctt
ttgacactgattgtcatttttattcttaaatgctgtaagtgtacatgtactgctgagcct
tgctgcactggttgctgcacggcttgttgtgtcgttcagaacccaaaccctgcagataca
tacaaacaagccaacaataacattgaaaccagacttccacctggattgacagtacagcct
aatttcattgaagttagggggaatggatcacttacaaagacctactgctacaaggcctgc
atgacagcaggatcaggaagtgacacatttatgttttataacactggtgttccagtagga
actatgccacatgcagtgattgcagacagaaacctaacagcacaaagtggacagagacat
agcctaatcatcttaaaaagtgaaacaaccactcctgtagagccaaaacatcctaaccca
gactggcgttactctgcatcactaaaagctgcaatgcagggtgctgtacatatggaagga
gcagcagtcttacgtggcgcagctgtaggactcgaacaacaatggccaacagtttccagt
gcaacaccagttcccgaaggaggagaagtgtctcccccagtaggagctggtgtgaactgc
aacagctggaccttcaaatatggacctggcaatcaaaaacaacaagtaccacaaatacca
cccgattttccagagaattttattatcccaggatccccagccatcatttcaatccgccag
gatcagccatccgctcaagctcataaaagtaactttataacctttggcaaaaaggaagaa
acaaagaagaaaaagaaaaagaagaaggggaataagaatcaagagaaagcaaataataac
gcagctgataacaatgatcaatga
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