KEGG   Nanorana parkeri (Xizang Plateau frog): 108795736
Entry
108795736         CDS       T04897                                 
Name
(RefSeq) collagen alpha-1(XI) chain-like
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:npr00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108795736
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:npr00536]
    108795736
Glycosaminoglycan binding proteins [BR:npr00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   108795736
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 108795736
NCBI-ProteinID: XP_018422525
LinkDB
Position
Unknown
AA seq 711 aa
MFWWFATQAVFHSGGLPHRRFATQAVFHSGGLPHRRFATQAVCHTGGLPLRRFATQAVCH
SGGLPHRRFATQAVFHSGGLPHRRFATQASLIGEKGEPAMLEPGTAIEGPIGFPGHPGEP
GPPGPSGPPGPIGDPGERGPPGRPGLNGADGIPGPPGNTVMLPFQYGGDSRGQTVSFQEA
QAQSILQQAKLAMKGPPGPVGLTGRPGPLGPPGSQGPKGDYGDNGPPGPRGFQGIVGPSG
KFGKRGRSGADGGRGMPGETGIKGDRGFDGLPGLPGENGHKGDMGGSGPPGPSGKNGDKG
SPGPSGPAGSPGEAGARGLVGPRGPPGPPGQPGVSGIDGAPGPKGNQGIQGESGPNGQQG
NPGSHGLPGPQGPIGMPGEKGPAGKQGISGLAGSDGPPGHPGREGPAGEKGVLGPPGSPG
PIGYPGSRGVKGAFGVRGLKGSKGEKGEDGFPGSKGDMGLKGDRGDPGTVGGRGEDGPEG
PKGQSGPLGELGALGIFGEKGKLGVPGLPGYPGRQGAKGSTGFPGSVGVVGEKGKRPVKE
EADSPDHRDSGDPPAREVNEVRVGQLESLDSREIPVMMVLLDLLERRDQWVPRGHLDSQD
PKDPLDLQGRTGYLDMPAHEESQVFKAKQAFQDQPGLLGLRANQGRLVQWENEVNRGHQD
LQENMDCQARQDGKELREIPVLLAMQVNLDLKGFEGFQVREEFLGSRVQLG
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgttctggtggtttgccactcaggcggttttccactcaggcggtttgccacacaggcgg
tttgccactcaggcggttttccactcaggcggtttgccacacaggcggtttgccactcag
gcggtttgccacacaggtggtttgccactcaggcggtttgccacacaggcggtttgccac
tcaggcggtttgccccacaggcggtttgccactcaggcggttttccactcaggcggtttg
ccacacaggcggtttgccactcaggcgagcttgataggagagaaaggagaacctgccatg
ttggagcctggcaccgcgattgagggtccaataggattccctgggcacccgggagaacca
ggaccgcctggaccttcaggacctcctggaccgattggggatccaggtgaaaggggtcct
ccaggaagacctggactcaatggtgccgatggtatacctggacctccggggaatacagtg
atgcttcctttccagtatggtggcgattccaggggacagactgtgtcgtttcaggaagct
caggcacaatccatcttgcagcaggctaagctggctatgaaaggtccgcctggcccggtg
ggtctgacaggacggcccggtcccctcggtcctcccgggtcgcaaggtccaaagggtgac
tatggagacaatggtcctccgggtccgcgtggcttccaaggcatcgtgggtccctcagga
aagttcgggaaaagaggacgcagcggagcagacggcgggcgcggtatgccgggagaaacc
ggaattaagggagaccgtggatttgatggcttgccaggacttccaggagagaacggccac
aaaggagatatggggggctcgggcccgcctgggccatctggaaaaaatggagacaagggt
tctcccggaccttccgggcccgctggttctcccggagaagctggtgcacggggcttggtt
ggtcctcgaggtccccctggcccaccaggtcagccaggtgtaagcggaattgatggcgct
ccaggtccaaaaggaaaccaaggcattcaaggagagagtggaccaaatggacaacaagga
aacccaggatctcatggtttacctggacctcagggtcccattggaatgccaggggagaag
gggccagcgggaaagcaaggcatatctgggttggctggatctgatggccctccgggacat
ccgggaagagaggggcctgctggagagaagggcgtcctgggtcccccgggctcacctggt
cctataggatatcccggctctcgaggagtgaagggagccttcggcgttagaggactgaag
gggagcaaaggagaaaagggtgaagatggttttcccggctccaaaggagatatggggctc
aaaggagacagaggggatccaggaactgtaggaggacgcggagaggatggtcctgaaggg
ccgaaagggcagtctggaccgctgggagagctgggagcactgggaatttttggagaaaag
ggaaagctaggagttccgggactcccgggatatccaggacgtcaaggtgcgaagggttcc
acaggatttcctggttcagttggcgtggttggagaaaaaggcaagaggcctgtgaaggaa
gaagcggacagcccggatcaccgggacagcggggaccctccggcacgagaggtgaacgag
gtcagagtgggccaactggaaagcctggactcaagggagattccggtaatgatggtgttg
ctggatctgctggagagaagggaccaatgggtgccccggggccacttggattcgcaggac
ccaaaggacccactggaccttcagggaaggacgggttacctggacatgccggcacacgag
gagagccaggttttcaaggcaaaacaggccttccaggaccaaccggggttgttgggcctc
agggcaaatcaggggagactggtccaatgggagaacgaggtcaaccggggtcaccaggat
ctccaggagaacatggattgccaggcccggcaggacgggaaggagctaagggagatcccg
gtccttctggcaatgcaggtaaatctggacctcaagggcttcgagggtttccaggtgcga
gaggaatttctggggagcagggtccagctgggttaa

DBGET integrated database retrieval system