Nanorana parkeri (Xizang Plateau frog): 108795740
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Entry
108795740 CDS
T04897
Symbol
COL5A3
Name
(RefSeq) collagen alpha-3(V) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108795740 (COL5A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
npr00536
]
108795740 (COL5A3)
Glycosaminoglycan binding proteins [BR:
npr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108795740 (COL5A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COLFI
Collagen
Motif
Other DBs
NCBI-GeneID:
108795740
NCBI-ProteinID:
XP_018422529
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MGPNGGDGPPGQPGGLGQPGAVGDKGEAGEGGDPGSPGESGPQGGKGDIGEKGESGASGA
AGPPGKKGRPGEDGPKGNMGAIGFPGDPGPRGEAGTPGVDGIPGEKGDGGESGNPGLPGP
SGEPGPNGPPGRRGQLGPAGKEGRQGEKGGKGERGTEGIVGKTGPVGAQGSPGKPGSEGM
RGIPGPAGEPGLLGPPGQTGPPGPMGPGGLPGLKGDSGSKGDKGHGGLIGLIGPPGEMGE
KGDRGPPGIQGVPGPKGDPGSVGPYGPNGPPGPNGLAGSLGQKGSKGAPGPIGMRGDPGQ
QGPPGPPGRPAQAVQPLPYEAYDTTRKRRRHSESLQGDDADIDYMADGMEEIYATLGSLK
TEIEQMRWPAGTKESPARTCKELQMCHPNYKDGEYWIDPNQGCNRDAIKVFCNFTSGGET
CLHPDKKFESVKVAAWSKETPGDWYSTFKRGKKFQYIDADGNPVHVVQMTFLKLLSAVGR
QNLTYNCQQSVAWYDMSKGNHEQSVKLRADNEEVLSHSRTPQIQALYDGCQLRKGAERTV
LEINTYKVEHLPLRDVAVSDFGDSNQKFGFELGPVCFNG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccaacggtggtgatggaccccccggacagccaggtggactgggccaaccagga
gccgttggagataagggagaagcaggagagggtggagatccaggatcaccgggagaatct
ggtccccagggaggtaaaggcgatattggtgagaagggggaatctggagcttcgggagcg
gcgggacctcctgggaagaagggacgtccaggagaagatggacccaaggggaacatgggt
gccataggttttccaggagacccaggaccacggggagaggctggaacaccgggtgttgac
ggtatacccggagagaagggcgatggcggagaaagcgggaatccgggactacctgggcct
tcaggagagcctggcccaaacggcccgcccggacgaagagggcaactggggcctgcaggc
aaagagggccgtcagggtgaaaaaggaggaaagggggagcgcggaactgaaggcattgtt
ggaaagacgggaccagtgggggcacaaggatcccccgggaaacctggatctgagggtatg
aggggcattccaggacctgctggggaaccaggcttacttggaccacctggtcagacagga
cctcccgggcccatgggtcctggtggactgcctggtcttaaaggagattcgggatccaaa
ggagataagggccatggcggtcttattggcttgattggacctccgggagaaatgggagag
aagggtgacagagggccccctggaatccagggtgtacccggacccaaaggagaccctgga
tcagttggaccatacggaccgaatggacctcctggacccaacggcctggcgggatctttg
gggcagaaaggttcgaaaggagctccaggaccaatcggcatgagaggagatccgggacaa
caaggaccccccggcccaccgggtcgcccagcacaagccgtgcagcctctcccctatgaa
gcatacgacacgaccaggaaaaggcggcggcactcggagagtctgcagggcgacgacgca
gacatcgattacatggctgacgggatggaggagatctacgccacgctcgggtccctgaag
acggagatcgaacagatgaggtggcctgcggggaccaaagagagcccggcgaggacctgc
aaggagctgcagatgtgtcaccccaattataaagatggtgaatattggattgacccgaat
cagggatgtaacagagacgccatcaaagtgttctgtaatttcacgtcgggcggagagacg
tgtcttcaccccgacaagaagtttgagtcggtgaaagttgcagcttggagtaaggaaacc
cccggagattggtacagcacgttcaaaagaggaaagaagttccagtacattgacgccgat
ggcaaccccgtccatgtggttcaaatgacattcctcaagctcctaagcgcagtaggccgg
cagaacctgacttataactgccagcagtctgtggcgtggtacgacatgtcgaagggaaat
cacgagcagtcggtaaagctgagggcggacaacgaggaggtgctcagccacagccgcaca
ccacaaatacaggcgttatatgacgggtgccaactccgtaaaggtgcagaacgaacggta
ctggagatcaacacctacaaggtggaacatctacccctcagggatgtcgccgtcagcgac
ttcggagacagcaaccagaagtttggcttcgagctcgggcctgtctgctttaacggctaa
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