KEGG   Nanorana parkeri (Xizang Plateau frog): 108795776
Entry
108795776         CDS       T04897                                 
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X1
  KO
K13095  splicing factor 1
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108795776 (SF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:npr03041]
    108795776 (SF1)
Spliceosome [BR:npr03041]
 Complex A
  Other components
   Complex A specific factors
    108795776 (SF1)
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP KH_1 zf-CCHC KH_12 zf-CCHC_5 zf-CCHC_3 KH_NusA_1st
Other DBs
NCBI-GeneID: 108795776
NCBI-ProteinID: XP_018422576
LinkDB
Position
Unknown
AA seq 570 aa
MDFQRKRKRSRWNDETPDQKTIIPGMPTVIPPGLSREQERAYIVQLQIEDLTRKLRTGDL
GIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVGLNPDFKPPADYK
PPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVAR
KDGQTLPGEDEPLHALVTANTMENVKKAVDQIRNILKQGIETPEDQNDLRKMQLRELARL
NGTLREDDNRILRPWQSTETRTITNTTLCTKCGGAGHIASDCKFTSVQVRPGEPQSAQDK
ARMDKEYLSLMAELGEAPVPSSIGATTTQSHNPVQGGPRPINMAGSQPPLNRPPWMATDR
PYPALHGAPHSFPGPMGGAGNGPPMQHSPAGPHPHWMQPHPGAHPPGPHPMGLLHSHPMG
LMPPPPPPPPTGPAPPPPSAPNLPPWQQQATAAPLQQTAPLSWQQTSQNTSASLPPWQQQ
GGATASSGTSMQTNASLVPPPPGVQPPLPPSAPPPPPPPPPGTSGLLYAPPPPPPPPIDP
SNFVTMMGMGVPGIPPFSMPPAPPPPPPQN
NT seq 1713 nt   +upstreamnt  +downstreamnt
atggattttcaacggaagcggaagcgcagtcgctggaatgatgaaaccccagatcagaag
accataattcctgggatgccaacagttatacccccaggactcagccgtgagcaagagaga
gcatatatagttcaactgcaaattgaggatctcactcgcaagcttcgcactggagacctg
ggaataccccctaacccagaagacagatcgccatctcctgaacccatttataatagtgaa
ggaaagcgcctgaacacacgcgagttcagaacacgaaagaaattggaagaggagcgtcac
aacctgatcacagaaatggtgggattgaatccagactttaagccacctgccgactacaaa
ccacctgctacacgagtcagtgataaggttatgattccccaggatgagtacccagagatc
aattttgtgggtttgctgattggtccaagaggaaatacactgaaaaatattgagaaagaa
tgtaatgctaaaattatgattcggggaaaagggtcggtgaaagagggaaaggtggcccgc
aaagatgggcagacccttcctggcgaggatgagccacttcatgccttggtaacagccaat
actatggaaaatgtcaagaaagctgtagatcagattcggaatatcctcaaacaaggtata
gagactccagaggatcagaatgaccttcgcaagatgcaattgcgtgagttagcacggctg
aatggtactctgcgtgaagatgacaataggatactacggccctggcaaagtactgaaaca
cgtaccattacaaacaccacgctgtgtacaaagtgtggaggagctggtcatattgcttcg
gattgcaagtttacaagtgttcaggtgcgacctggagaacctcagtctgcccaggataaa
gcaaggatggataaagaatatctctctctcatggcagaactgggtgaagctcctgtgcct
tcctctataggagccacaactactcagtcccacaatcctgttcaaggaggtccaaggcca
attaacatggcaggaagccaaccaccgctgaatcgtcctccctggatggccacggatagg
ccatatccggctttgcatggtgcgcctcactctttccctggtcctatgggaggagcagga
aacggcccacccatgcagcatagtcctgctggtcctcatcctcactggatgcagccacat
cctggagcccatccacctggtccccatcccatgggtctcttgcattctcaccccatgggc
ttaatgccacctccaccaccaccaccacctactggcccagcaccaccaccaccgtcagcc
cctaatttgcctccctggcagcaacaagcaacagctgcccctctacagcaaactgcaccc
ctttcttggcagcaaacctcacaaaacacatctgcctctcttcctccatggcagcagcaa
ggaggagccactgcttcatcaggcacatccatgcagacgaatgcttccttggtgccgcct
cctccgggtgttcaacctccacttccacctagtgctcctccaccaccacctcctcctcct
ccaggaacatctggccttctctatgccccaccacctccacccccacctccaattgatcct
tctaactttgtaacaatgatgggtatgggggttccaggtatacccccattttctatgccc
cctgctccaccaccaccacctccccaaaactaa

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