Nanorana parkeri (Xizang Plateau frog): 108796279
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Entry
108796279 CDS
T04897
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108796279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npr04121
]
108796279
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108796279
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108796279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-B_box
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-RING_6
zf-ANAPC11
FTA4
zf-RING_4
zf-RING_10
ANCHR-like_BBOX
ALS2CR8
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
108796279
NCBI-ProteinID:
XP_018423245
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MASGNLRAELECSVCLNTYTDPVTLKCGHNFCRDCIGHVLDTQEGSGGYSCPECREKFQE
RPALQRNITLRNIVEKFLSAQPDPEESGVLCTQCYHAPVPAVKSCLLCEASLCDNHLRVH
SKSPEHVLCDLTTSLENRKCSIHRELLKYYCTEDSACICVSCSLAGEHRGHQVETLDEAS
EKKKKKLRNVLQKLMTEREETEKRVQSLEEHRRKVQGEAAGETERVTALLRDLRRRLEDL
EKRVLSEISGKAERTSLYVTDMIRELEIKKDELSRKMCHIEELCNMMDPLTVLQESDTGD
LCDTEDGDDGDRERHDRLLHDGGDLDVAGMSHTLHTGISDIMSGLNVQEGPGTHVYPHSS
RKDKRPITAKPSRTRLRPSPTIQHSHLKTGGHNIEAVRQTSGVSGITDILLDESTAGNNL
LISDDRKAASWSVFSQNRPETPESFQGSQALSSRSFSSGRHYWEVDVGGSVLWRVGMCYP
SIERRGDQSGIGDNKKSWGMVRWGGNQYSVRHDNNEMVLPGDVPSNRVRIDLDYEAGRIS
FYDLCDPIRHLHTFTTTFTEPLHAGLYVWGGVMASANLKKKLECSVCLKIFTDPITLRCG
HNVCQDCIGHVLDTQEGSGEYFCPICKDEFQKRPARHNTVENFLSAQPDQKESEVLCTQC
YHAPVPAVKSCLMCEASLCENHLRIHSKSPEHTLCDPTTSLENRKCSVHRELLKYYCTED
SACICVSCRLDGEHRGHQVETLDEASEKKKKKLRNVLQKLMTKKEETEKRVQSFSHIMSG
VNVQEGPGTHVYPHSSTKDKGHIEAELSRPRPQPSPTVQQSHLQAEGSNIGAVQETSGVS
GVTDILLDVSTASNNLRISDDRKTASYSSYLNRPETPERFQCPQVLSSQSFSSGRHYWEV
DVGRSTSWIVGMCYPSIKRRGDQSEIGDNKKSWSLERKRFKKCSVLHDNNEIPLPEKLSN
CTETGNLEESTDTVHTGNLACMLERTGAKMQRNDWEGLLRDILEAVTMSNTSLVNLTSTV
QGLEEEVMRIRHDIQRIRDGTAALEGGVINVEDDMKPVHREVRLNSLTVQQHGARTEDLE
HRLRRSAGLEPLSEERESTDTNTRHTAPDSSTITPGTPQVNLWGNSSESSTPITIHDDSP
LHEEAIDLLPEDSRSAS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggtaatctgagagctgagctggaatgttccgtctgtctgaacacttataca
gatcctgtaaccctgaaatgtggacataacttctgccgggactgtattggtcatgtgctg
gatacacaggaggggtctggaggatattcctgtcctgaatgcagagagaagttccaggag
cggcctgcactgcagaggaacataacattgcgtaacattgtggagaaattcctgtctgct
cagccggatccggaggagtccggggtcctctgtactcagtgttatcacgctcctgtacct
gctgtgaaatcctgtctgctgtgtgaagcttctctgtgtgacaaccacctgagagtccac
agcaagtccccagaacacgtcttatgtgacctcaccacttccctggagaacaggaaatgc
tccatccatagggaactactgaagtattactgcactgaggactctgcctgtatctgtgtg
tcctgcagcttggctggagaacatcgaggacatcaggtggagactctggatgaggcctct
gagaagaagaagaagaaactgaggaatgttctgcagaaactgatgacagagagagaggag
acggagaaaagggtccagagtctggaggaacacaggaggaaagtacaaggagaagcagcc
ggtgaaacagagagagtcactgccctgctcagagacctcaggagacgtctggaggacctg
gagaagagagtcctgagtgagatctccgggaaggctgagcggacctccctctacgtgacg
gatatgatccgggagctggaaataaagaaggatgagctgtccaggaagatgtgtcacatt
gaggagctgtgtaacatgatggatccactgactgtcttacaggaatcagacacaggtgac
ttgtgtgatactgaggatggagatgatggggacagagagagacatgatagactcctccat
gatggaggggatctggatgtggctgggatgtcacatacattacacacaggtatatctgat
ataatgtccggcttaaatgtacaggaaggtccaggcacacatgtctatccacattctagt
agaaaggacaaacgtcccatcactgctaaaccatccaggacacgcctccgaccctccccc
accatacaacactcacacctcaagactggaggacataatattgaggctgtacggcaaaca
tcgggggtgtcggggattacagacatattactggatgagagcacagctggtaataatctt
cttatatcagatgataggaaagctgcatcctggtcagtgtttagccagaatcgtccagaa
actccagagagctttcagggttctcaggcgttgagcagtcggagtttctcctcagggcga
cattactgggaagtggatgtcggggggtcagtgctatggagagtagggatgtgttacccc
agtatagagaggagaggagatcagtcagggattggagataataagaagtcctggggtatg
gtgaggtgggggggtaatcagtattcagtaagacatgacaataatgagatggtattgccc
ggcgatgtccccagtaacagagtcaggatagatctggattatgaggccgggcggatctcc
ttttatgatctgtgtgacccgatccgacacctccacaccttcaccaccaccttcactgag
cccctccatgccgggttatatgtatggggaggtgtgatggcgtctgctaatctgaagaag
aagctagaatgttccgtctgtctgaagatttttacagatcctataaccctgagatgtgga
cacaacgtctgccaggattgtattggtcatgtgctggatacacaggaggggtctggagag
tatttttgtcctatatgcaaagatgagttccagaagcggcctgcacggcataacacagtg
gagaatttcctgtctgctcagccagatcagaaggagtccgaggtcctctgtactcagtgt
tatcacgctcctgtacctgctgtgaaatcctgtctgatgtgtgaagcttctctgtgtgaa
aaccacctgagaatccacagcaagtcaccagaacacaccttatgtgaccccaccacttcc
ctggagaacaggaaatgctccgtccatagggaactactgaagtattactgcactgaggac
tctgcctgcatctgtgtgtcctgcaggctggatggagaacatcggggacatcaggtggag
actctggatgaggcctctgagaagaagaagaagaaactgagaaatgttctgcagaaactg
atgacaaagaaagaggagacggagaaaagagtccagagtttctctcatatcatgtctggg
gtaaatgtacaggaaggtccaggcacacatgtctatccacattctagtacaaaggacaaa
ggtcacatagaggctgaactatccaggccacgtcctcaaccatcccctactgtacaacag
tcacacctccaggctgaaggatcaaatattggggctgtacaggaaacatcgggggtgtcg
ggggttacagacatattattggatgtgagcacagccagtaataatctacgtatatcagat
gacaggaaaactgcatcctattcatcatatctgaatcgtccagaaactccagagagattt
cagtgtcctcaggtgttgagcagtcagagtttctcctcagggcgacattactgggaagtg
gatgtcgggaggtcaacatcttggatagtcgggatgtgttaccccagtataaagaggaga
ggagatcagtcagagattggagataataagaagtcctggagtttggagaggaagcgtttt
aaaaagtgttcagtgttacatgataataatgagatcccattacccgaaaaactctccaat
tgtactgagactggtaacctggaggagagtactgatacagtacacacaggaaaccttgcc
tgcatgctggaaaggacaggagccaagatgcagagaaatgactgggagggcctcctcaga
gatatactggaggctgtgactatgagtaatacctcgttagtaaatcttacaagtaccgtg
caaggtttggaagaggaagtcatgcggattcgtcacgatatacaaagaatacgcgatgga
acggcagcattagaaggcggagttatcaatgtcgaggacgacatgaaacctgtacataga
gaagtgcgccttaactctctgaccgttcaacaacacggagcacgcacagaggacttagaa
catagactccggcgtagtgctgggctagaacccctctcagaggagcgggaatccactgat
acaaacacccggcacactgcacctgattcctcaaccatcactccaggaactccacaagta
aacctctgggggaactcatcggagtcttctacaccaatcaccatacacgatgattctcct
cttcatgaagaagccatagacctgctaccagaggactcaaggtctgcttcctga
DBGET
integrated database retrieval system
