Nanorana parkeri (Xizang Plateau frog): 108797459
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Entry
108797459 CDS
T04897
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04137
Mitophagy - animal
npr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108797459 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108797459 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108797459 (VCP)
03009 Ribosome biogenesis [BR:
npr03009
]
108797459 (VCP)
04131 Membrane trafficking [BR:
npr04131
]
108797459 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npr04147
]
108797459 (VCP)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108797459 (VCP)
Ribosome biogenesis [BR:
npr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
108797459 (VCP)
Membrane trafficking [BR:
npr04131
]
SNARE
SNARE associated proteins
Others
108797459 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108797459 (VCP)
Exosome [BR:
npr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108797459 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
108797459
NCBI-ProteinID:
XP_018424557
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MSPCLCPYSPKAEDLSTAILKQKSRPNRLIVDEAINEDNSVVSLSQGKMDELQLFRGDTV
LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL
PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVA
PDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKP
PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNA
PAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPAL
RRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSE
AALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWE
DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAA
DRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAIL
KANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNP
SAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGG
QGGTGPSQGAGGGTGGNHFAEEEDDLYG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtctccttgtttgtgtccttacagccccaaagcggaagatttatccactgccatcctg
aagcagaagagccgacccaatcggttaatcgtagatgaggcgatcaatgaagataacagt
gtggtctctctgtcccagggcaagatggatgagctgcagctgttccgtggggacactgtc
ctcctaaaagggaagaagaggcgagaagctgtgtgcatcgtcctgtctgatgacacttgt
tccgatgagaagatccggatgaacagggttgtccgtaacaatttacgtgtcaggcttgga
gatgtcatcagcattcagccatgcccagatgtgaagtacggcaagcgcatccatgtccta
cccatcgatgacacagtggaaggaatcacaggaaatctctttgaggtctatctgaagcct
tacttccttgaggcctacaggcctatccgaaaaggtgacatatttctggttcgtggtggg
atgcgtgcagtggaattcaaggtagtggagactgatcccagtccgtactgtatagtcgcc
ccagatactgtgatccactgtgaaggagagcccattaaacgtgaggatgaagaggagtct
ctcaatgaagtgggatatgatgatattggaggctgcaggaaacagctggcacaaatcaaa
gagatggtggagctcccactgagacaccctgcactctttaaggccattggtgtgaagccg
ccacgtggtatcctgttgtatggaccccccggaactggaaagaccctgattgctcgagca
gtagcgaacgaaaccggcgcctttttcttcctcatcaatggtcctgagattatgagcaaa
ttggctggtgagtctgagagcaacctgcgcaaagcctttgaggaagcggagaagaacgcc
cccgccatcatttttattgatgaattggatgccattgcccccaagagagaaaagacacat
ggagaagtggaacgccgcattgtgtctcaattgctaacgctaatggacgggctaaagcaa
agagcgcacgtcatagtcatggctgccactaacagacccaacagcattgatccagcactc
cgacgttttggccgctttgacagggaagttgatatcggaattcctgatgctactggaagg
ctggaaatccttcaaattcacacaaagaacatgaagcttgcagatgatgttgatctagaa
caggttgcaaatgaaacccacggacatgttggtgcagatcttgctgctctgtgctctgaa
gccgctctccaggccatccgtaaaaagatggatctcatcgatttagaagatgaaaccata
gatgctgaagtaatgaactccttggctgtcactatggatgacttcaggtgggcacttagt
cagagcaacccatcggcgctgcgtgagacagtggtggaggtgccgcaggtcacctgggag
gatattggtggcttagaagatgttaaaagggagctgcaggaattggtacagtatcctgtg
gagcatccagacaagttcttgaagtttggcatgacaccatctaaaggtgtgcttttctat
ggaccacctggatgtggtaagactttgttagccaaggccattgccaacgagtgccaggcc
aacttcatctccatcaaaggccccgagctgctcaccatgtggtttggagagtctgaagcc
aacgtcagagagatctttgacaaggctagacaggccgccccatgcgtcctcttctttgat
gaactggattccatcgccaaggcccgtggtggcaacgtcggtgatggtggtggagctgct
gacagagtcatcaaccagatcctgactgagatggatggaatgtccaccaaaaagaacgtc
ttcatcattggagccaccaacagacctgacatcattgacccggccatcctgcgtcccggc
cgcctggatcagctcatctacattccactacccgatgagaagtcccgcattgccattcta
aaggccaacctgaggaagtctcctgttgccaaggatgtggacgtggacttcctggccaag
atgaccaatggtttttctggtgctgatctgactgagatctgtcagcgggcctgcaagctt
gcaatccgtgaatccattgaaaatgagattaggagggagcgggagagacaaacgaaccct
tcagccatggaagtggaagaggatgaccccgttcctgaaattcgccgggatcactttgag
gaagccatgcgatttgcccgccggtccgtcagtgacaacgacatcagaaaatatgaaatg
tttgcacagaccttgcagcagagccgtggctttggcagtttcagattcccctccggaggg
cagggaggaaccggtccaagccaaggagctggaggcggtactggggggaaccactttgct
gaagaagaagacgacctttatggctag
DBGET
integrated database retrieval system
