Nanorana parkeri (Xizang Plateau frog): 108797534
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Entry
108797534 CDS
T04897
Symbol
SMC1A
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04110
Cell cycle
npr04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108797534 (SMC1A)
04114 Oocyte meiosis
108797534 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npr03036
]
108797534 (SMC1A)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108797534 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
108797534 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108797534
NCBI-ProteinID:
XP_018424647
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFRRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGNPAANRAFVSMVYEEDNAVEKVFSRHIIGGSSEYRINSKVVQLAEYSDN
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAAEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVIRAQIQLQLFKLYHNECEIEKLNK
ELGTKNKDIDKDKKHMDKIEEELKEKKKDLGKIMREQQSIEKEIKXVLIKQQRADTNXKR
PQYIKAKENTSHKIKKLEAAKKSCQNAQKQYKKRKADMDELEKEVQAVEKARQEFEERME
EESQSQGRDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKV
ETEAKIKQKLREIEENQKRIEKLEEYIATSKQSLEEQKNLEETLTEDVEMAKRRIDEINK
ELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVT
KVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVI
DVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGG
ASDLKAKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYS
QSDLEQTKTRHLAMNMQEKSKLESELANFNPRINDIKKIIQSRDKEMKDLKEKMNLVEDE
VFKEFCEEIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDYEKNQLKEDQGKV
QQWEQSVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHLMEEIR
KKLGGANKEMTHLQKEVTAIETKSEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQGEG
GSQGEESVGGSQRSSTVYAREALIEIDYSELSEDLKDAVADDDIKQEMSSLHQKLNEQQS
VLQRISAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQTKKERFDRFNACFE
SVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTV
AALALLFAIHSYKPSPFFVLDEIDAALDNTNIGKVANYIKEQSMTNFQAIVISLKEEFYT
KAESLVGVYPEQGDCVISKVLTFDLTSYPDANPNPNEQ
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgggctttctgaagttgatagagattgagaatttcaagtcgtacaagggacggcagatc
ataggacccttccgccgcttcaccgccatcatcggtcccaatggatcaggaaaatccaat
cttatggatgccatcagctttgtgctgggggagaagacaagtaacttgcgtgtgaaaact
cttcgcgatcttattcatggagcgccagtgggaaaccctgccgctaaccgcgcctttgtc
agcatggtatatgaagaagacaacgcggtagagaaggttttttcgagacatattattggc
ggatcttctgaatatagaatcaacagcaaggttgttcaactggcagagtacagcgataat
ctggagaagttggggatcttgattaaagccagaaacttcctggtgtttcagggcgcagtc
gaatccattgccatgaagaatcccaaggagcgtacggctttgtttgaggagatcagcagg
tcgggggaactggcagcagaatatgataagcgcaagaaggagatggttaaagcagaggaa
gacacgcagttcaactatcaccgcaagaaaaacattgctgcggagagaaaggaggccaaa
caggagaaggaagaggccgagcgttatcagcgcttgaaagacgaagtgattcgagcccag
atccagttgcagctgtttaagctgtaccacaatgagtgtgagattgagaagctgaacaaa
gagctgggaaccaagaacaaggacatagacaaggacaagaagcacatggacaagatcgag
gaggaactgaaggagaagaagaaagacctgggcaaaattatgagagagcagcagtctata
gagaaggagatcaagtaagtcctaataaagcagcagagggcagacacaaactagaagcgc
ccacagtacatcaaagccaaggaaaacacttctcacaagatcaagaagttggaagcagct
aaaaagtcgtgtcagaatgcccagaagcaatataagaaacgtaaggcagatatggatgag
ctggagaaggaggtgcaagctgtggagaaggccagacaggagtttgaagagaggatggag
gaagagagtcagagtcaaggcagagaccttacacttgaggaaaaccaggtgaagcaatac
caccgcttaaaagaagaagccagcaagagggccgccaccctcgcccaagaattggagaaa
ttcaatcgcgatcagaaggccgatcaagatcgcctcgatttggaggagaggaagaaagtg
gagactgaggcgaaaatcaaacagaaattgcgtgaaatagaagaaaaccaaaaaagaatc
gaaaaattggaggaatatattgctaccagcaagcagtccttggaagagcagaagaacctt
gaagagacattgaccgaggatgtggaaatggctaagaggagaattgatgagatcaacaag
gagttaaaccaagtgatggagcagttgggagacgccaggattgatcgccaagagagcagc
cggcagcaacgcaaagctgaaatcatggagagcattaagaggctgtatcctggttctgtg
tatgggcgtctgattgacctctgccagcccactcagaagaaataccagattgcagtcacc
aaggtgcttggcaaaaacatggacgccatcattgttgattcggagaagactggcagagac
tgcatccagtatattaaagagcagcgaggagagccagaaaccttccttcctctggattac
ttggaggtaaaacccactgatgagaagctgcgtgagctaaaaggagcaaagctggtgatt
gatgtcatccgctacgagccgccacacatcaagaaggctctgcagtatgcctgcggtaat
gccctggtgtgtgataatgttgaagatgctcgtcggatagcctttggaggacatcagagg
cacaaaactgttgctttggatggcactctgttccagaagtctggtgtgatctctggtggt
gccagtgacttgaaagccaaagccaggcgatgggatgaaaaagcagtggataaactcaaa
gaaaagaaggaaaaattaacggaagagctaaaggagcaaatgaaagccaagcgtaaggag
gccgagctaagacaagtccagtctcaagctcacggtctgcagatgagacttaaatattcg
cagagtgatctggagcagaccaaaacccgacacttggcaatgaacatgcaggaaaaatcc
aagctggaaagtgagctggccaacttcaacccacggatcaatgacattaaaaagatcatt
cagagccgcgacaaggagatgaaggacttgaaggagaagatgaatctggtggaagacgag
gtgtttaaggagttctgcgaggagattggtgtccgtaacatccgagagttcgaagaggag
aaggtcaagagacagaacgagattgcaaagaagaggttggagtttgagaaccaaaagacc
cgtctgggtatccaacttgattatgagaagaaccagctgaaagaggaccaagggaaagtt
cagcagtgggagcagtctgtgaagaaagatgaaaatgaaatagaaaaacttaaaaaggag
gagcaaaggcacatgaagatcatagatgagacgatggcgcagctgcaagatctgaaaaac
cagcacctggccaagaagtcggaggtcaatgacaagaaccatctcatggaggagatccgc
aagaagctagggggtgccaacaaagaaatgacacatctacaaaaggaagtcacggccatt
gagaccaaatccgagcagaagaggagtgatcggcacaatttgctgcaagcctgcaaaatg
caagatataaagctccccctgtctaaaggcactatggatgacatcagccagggagagggt
ggctctcagggcgaggaatctgtcggcggctcccagagatcctccacggtgtacgcgcga
gaagcgttgatcgaaatagactacagcgagctctccgaggacctgaaggacgcggtagcg
gacgacgacatcaagcaggagatgagctcgttgcatcagaagctgaacgagcagcaaagc
gtcttgcagcggatttccgcccccaacatgaaggccatggagaaactggagagcgtcaga
gacaaattccaggagacgtcagacgagtttgaagccgctcgcaaacgcgcaaagaaagcc
aagcaggcctttgagcagacgaagaaggagaggtttgaccggttcaatgcgtgcttcgag
tctgtggccaccaacatcgatgagatctacaaagctttgtccagaaacagcagtgcccag
gctttcctgggaccggagaaccccgaggaaccctacttggatggtatcaactataactgc
gtggctccggggaaacggttccgacccatggacaacttgtctggaggagagaaaactgtc
gcagctctggctctgctctttgccatccacagttacaagccgtcgccattcttcgttttg
gatgaaatagacgctgctctggataacaccaacataggaaaggtggccaactatattaag
gagcagtccatgaccaacttccaggcaatcgtcatctccctcaaggaggagttctacacc
aaggcggaaagtttggttggagtttacccggagcaaggtgactgtgtgatcagcaaagta
ctgaccttcgaccttaccagttacccagatgccaacccgaacccaaatgagcaatag
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