Nanorana parkeri (Xizang Plateau frog): 108797646
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Entry
108797646 CDS
T04897
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108797646 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npr03041
]
108797646 (DDX5)
03009 Ribosome biogenesis [BR:
npr03009
]
108797646 (DDX5)
Enzymes [BR:
npr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108797646 (DDX5)
Spliceosome [BR:
npr03041
]
Complex A
U1 snRNP components
U1 related factors
108797646 (DDX5)
Complex B
108797646 (DDX5)
Ribosome biogenesis [BR:
npr03009
]
Eukaryotic type
Pre-60S particles
Helicases
108797646 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
108797646
NCBI-ProteinID:
XP_018424781
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MPGFNDRPRGFGGAPRFGGNRNGSSGKYGNPGERLVKKKWNLDMLPKFEKNFFQELPDAA
RRTPQEIEQYRRSKEITVRGFNCPKPMFQFHEASFPDNLMGVIRHQNFTEPTPIQSQGWP
VALSGLDMVGVAMTGSGKTLSYLLPGIVHINHQPFLQRGDGPILLVLAPTRELAQQVQQV
AAEYGRACRLRSTCIYGGAPKGPQLRDLERGVEICIATPGRLIDFLEAGKTNLDRCTYLV
LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVHINIGALE
LSANHNILQIVDVCNDGEKDDKLVRLMEEIMSEKENKTIVFVETKRRCDDLTRKLRRDGW
PAMGIHGDKSQQERDWVLNEFKHGKSPILIATDVASRGLDVEDVKFVINYDYPNSSEDYI
HRIGRTARSTKTGTAYTFFTPNNAKQVNDLISVLREANQTINPKLLQMVEDRGGRFRGRG
GMNDRRDRFSSGKRGGWDRENRGFGAKRDFGNKPQNGFGAQQYGNGNSYGYGVQANQGGY
RGGPQQNGSYQNYNAGQQYAAAALQNGMTQQAYTYPVAAAATTAPALIGYPMPAAYTQ
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattcaacgacagaccccgcggatttggaggagcacccaggtttggaggcaac
agaaatggatcatctgggaaatatggaaacccgggagagcggcttgtcaagaagaaatgg
aacttggacatgttaccaaagtttgagaagaacttctttcaagagctccctgatgcagcc
cggcgcacaccgcaagaaatagagcagtacagaaggagcaaagaaatcaccgtcagaggc
ttcaactgccccaagcccatgtttcagttccacgaagcaagcttccctgataacctcatg
ggagtgatcaggcaccagaatttcaccgagcccacacccatccagagccagggctggcca
gttgccttgagcggactggacatggttggtgtcgctatgactggatctggaaaaacactt
tcttacctacttcctggaattgtccacatcaatcaccaaccattcctacagagaggagac
gggccaattctcctggtgctggcacctacccgagaactggcacaacaagtgcagcaagta
gcagccgagtatggcagagcctgccgcttaagatctacctgtatttatggaggagccccc
aaaggaccacagcttcgtgacctagaaagaggtgttgaaatttgcattgccacacctggg
cgacttattgacttcctggaagctggaaagaccaacctggacagatgcacatacttggta
cttgatgaagcagacagaatgcttgatatgggttttgagccccagatcaggaagattgtg
gatcagatcaggcctgacagacagaccctgatgtggagcgctacctggcctaaagaagtc
cgacagcttgcagaagatttcctgaaagactatgtacacattaacatcggtgccctggag
ctgagtgccaaccacaacatcctgcagatagtcgatgtttgcaatgatggagaaaaggat
gacaagcttgtccgtctgatggaggagatcatgagcgagaaggaaaacaagaccattgtg
tttgtggagacaaagaggcgctgtgatgacctcacgcggaaattacgcagagatgggtgg
cccgcaatggggattcatggtgacaaaagccagcaggagagagactgggtgttaaatgag
ttcaagcatggcaagtcaccaatcctcattgccacagatgtggcgtcccgtggtctagat
gtggaagatgtcaaatttgtcataaactacgactatccaaactcctccgaggattacatc
caccgcattggccgaaccgcccgtagcaccaaaaccggcacggcctacacgttcttcaca
cccaacaatgccaaacaggtcaatgacttgatctccgtgctgagggaagccaaccagaca
atcaaccccaaacttctccagatggtggaggacagaggagggcgtttcagaggccgcgga
ggaatgaacgaccgtcgtgacaggttctcttcaggcaagcggggcgggtgggaccgggaa
aacagagggtttggtgctaagagagactttggaaacaagccccagaatggctttggggct
cagcagtacggcaacggcaactcctacggctacggtgtccaggccaaccaaggaggctac
cggggagggccacagcagaacggctcctaccagaactacaatgccggacagcagtacgcc
gccgcagccttgcagaacgggatgacacaacaggcatacacatacccagtcgccgcagcc
gccacaacagctcctgccctcataggttatcctatgccagcggcctacacacaataa
DBGET
integrated database retrieval system
