Nanorana parkeri (Xizang Plateau frog): 108797655
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Entry
108797655 CDS
T04897
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04510
Focal adhesion
npr04520
Adherens junction
npr04810
Regulation of actin cytoskeleton
npr04820
Cytoskeleton in muscle cells
npr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108797655 (VCL)
04520 Adherens junction
108797655 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108797655 (VCL)
04810 Regulation of actin cytoskeleton
108797655 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108797655 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
npr04812
]
108797655 (VCL)
04147 Exosome [BR:
npr04147
]
108797655 (VCL)
Cytoskeleton proteins [BR:
npr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108797655 (VCL)
Exosome [BR:
npr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108797655 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
108797655
NCBI-ProteinID:
XP_018424792
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPELTAPVAAVQAAVSNLVRVGKE
TVQTTDDQIMRRDMPPAFIKVENACAKLVQAAQMLHADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLAVAEVVESMEDLVTYTKNLGPGMTKMAKMIDDRQQ
ELTHQEHRVMLVNSMNMVKDLLPVLISAMKIFVTTKSSRSQGVEEALKNRNFTVDKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIGSKMNQAKGWLRDPNAPPGDAGEQAVR
QILDEAGKVGELCAGKERKDILGTCQALNQITDQVADLRARGQGATPAAMQKAQQVSQGL
DLLTAKVENAARKLEVLTNSKQAIGKKIDAAQSWLADPNGGPEGEETMREILAEAKRIAE
LCEDPKDREDILRSLGEIAAATGKLSELRRQGKGNTPEARALAKQIATSLQNLQTKVNRA
VANSRPVKAAVNMEGKVEQAQRWIDNPSVDDRGVGQAAVRGLVAEGRRLANSMIGPYRQD
MMAKCDRVEQLAGTLAELAARGEGDTPQARAVAAQLQDALKDLKTRMQEAMTQEVSDVFS
DTTTPIKLLAVAATSPPDAPNREEMFLERSANFENHAARLGATAEKAAAAGSANKTTVEG
IQATVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTR
ALLDASEEAIKKDIDKCRVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKNASDDLSKTISPMVLEAKAVAGNISDPALQKGFLESGYRILGAVAKVREAFQPPEP
EFPPPPPDLEHLRLTDEAAPPKPPLPEGEIPPPRPPPPDEKDEEFPEEKVGEVNEPMMVA
ARQLHEEARKWSSKSPGSPAPATPQGREAVVSEVEQEREEEEEEEEASVEFVLSSDVEDD
YEPELFLVPEGQPVNQPMLAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGG
SGNKRALIQCAKDIAKASDEVTKLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILST
VKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWAR
KTPWYQ
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcttccacaccaagaccatagagagcatcctggagccggtggcccagcagatc
tcccaccttgtcatcatgcatgaagaaggcgaggtagacggcaaggccatcccagagctg
accgcacctgtagcggctgtgcaggcggcggtcagcaacctagtccgggttgggaaagaa
actgttcagacgactgatgatcagataatgaggagagacatgccgcctgctttcatcaaa
gtagaaaatgcgtgtgctaagcttgtccaggctgctcaaatgctgcatgcagatccatat
tctgtgccagctcgtgattaccttattgatggttctcgtggaatcctctctggcacctca
gatctgcttctgacttttgatgaggctgaggtgaggaaaataatcagagtgtgtaaaggt
attctggagtacctggctgttgcagaggtggttgaaagcatggaagatctggtgacgtac
accaagaatttgggaccaggaatgaccaagatggcaaaaatgattgatgaccgtcaacaa
gagttgacccatcaggaacatagagttatgcttgtcaattccatgaacatggtgaaagat
ctgctgccagtgttgatttcagctatgaagatctttgtgacaactaagagttcccgtagc
caaggtgtagaagaagctctgaaaaatcgtaactttacagtggataagatgagtgctgag
attaatgaaataattagagtactgcagcttacttcttgggatgaagacgcctgggccagc
aaggacacagaagctatgaagagggcccttgcgctcattggctctaaaatgaaccaggca
aagggatggctgagagatccaaatgcacccccaggtgatgccggagagcaagctgtgcgc
cagattctggatgaggcagggaaagtcggggagctatgtgcaggcaaggagcggaaggac
attttggggacctgccaggctctaaatcagataacagatcaagtggctgatttaagggca
agaggccaaggtgctaccccagcagcaatgcagaaagcacagcaagtatctcagggctta
gacctcctgacagctaaagttgaaaatgccgcccgtaagttggaagttctgacaaactcc
aaacaagctattggcaaaaagattgacgcagctcagagctggcttgcagatcccaatggt
ggtcctgaaggagaggagactatgcgggaaatcctagcagaagctaagaggattgcagag
ttgtgcgaggatcctaaggatagagaggacatcttgcgttccttgggagaaatagcagcg
gccactggcaagctgagtgagctccgtcgacaagggaagggaaacacaccagaagcacgt
gccttagcgaagcagatagcaacttcactgcagaatttgcagaccaaggtgaatcgtgcc
gtggccaacagccgtcctgtgaaagctgctgtaaatatggaaggaaaggtagagcaggcc
cagcgctggattgacaatccctctgtggatgaccgtggtgtgggtcaagctgccgtccgt
ggcctcgtagcagaaggacgtcgcttggcgaactctatgatcggaccttaccgccaagat
atgatggcaaagtgtgaccgtgtagagcagttggcgggaacacttgctgagctagcagca
cggggcgaaggggacacaccacaggctcgagctgtggctgctcaactccaggatgcgttg
aaggatctgaagaccaggatgcaagaagcaatgactcaggaagtgtctgatgtattcagt
gataccactactcctattaaacttctggctgtggcagccacctcaccacctgatgctcca
aacagagaggagatgtttttggagagatctgccaattttgagaaccatgcggctcgtctt
ggtgctacagcagaaaaagcagcagcagcaggatcagctaataaaaccactgtggaagga
atacaagcaactgtaaagacggccagggagctcactcctcaggtagtctctgctgctcgg
atcctgttgcgtaatccagggaaccaggctgcctatgaacactttgaaaccatgaaaaat
caatggatagataatgtagaaaaaatgacaggccttgtggatgaagccatagacacccgg
gccctgctggatgcttctgaggaagctattaagaaggatattgacaaatgcagagtggcc
atggcaaatatgcaaccccagatgcttgttgctggagccactagtattgcgcgccgtgca
aaccgtatcctgttggtggccaaaagggaggtggagaactcagaagatccaaaattccga
gaggcggtaaagaatgcttcagatgaccttagcaagaccatctctcctatggttctggaa
gccaaagctgtagctggcaacatctcagatccagctttgcagaaaggcttcttggaatcg
ggctacaggatcctaggagctgtggccaaagtgagggaagcattccagcctccggagcca
gaattccctccacctccccctgacttggagcatctgcggctgaccgatgaggctgcacct
cctaaaccacctcttcctgaaggagagattccaccacccaggcccccacctcctgatgag
aaggatgaagagttccctgaagagaaggtgggcgaggtgaatgaaccaatgatggtggct
gcaagacaacttcacgaagaagcacgcaaatggtccagcaagtcacctggaagccctgct
cctgctaccccgcagggtagagaagccgttgtgtctgaggtagagcaggagcgtgaggaa
gaggaggaggaggaggaagcgtcagtggaatttgtcctctcctctgatgttgaagatgat
tatgagccagagctgttcttagtgcccgaggggcagcctgtgaaccagccaatgctggcc
gcagctcagtctttacaccgagaagctaccaaatggtccagtaagggtaatgacatcatc
gcagctgccaagcgcatggctctgcttatggctgagatgtctcggcttgtgagaggtggt
agtggcaacaagagagctctgattcagtgtgccaaagacattgctaaagcatcagatgaa
gtgaccaagctggccaaggaagtggctaagcagtgcacagataagaggatcagaactaac
ttgctacaggtatgtgaaaggatcccgactatcagcacccagctaaagattctgagtact
gtcaaggccactatgctgggaaggaccaatatcagcgatgaagaatcagagcaggcaaca
gaaatgcttgtccataatgcacagaacctgatgcagtcagtaaaagagactgtaagggag
gctgaagctgcatcaatcaagatccggacagatgctggattcacacttcgttgggcccgg
aaaaccccctggtaccagtaa
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