Nanorana parkeri (Xizang Plateau frog): 108797918
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Entry
108797918 CDS
T04897
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr00100
Steroid biosynthesis
npr01100
Metabolic pathways
Module
npr_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
108797918
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
npr01006
]
108797918
Enzymes [BR:
npr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
108797918
Prenyltransferases [BR:
npr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
108797918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
DUF7824
Motif
Other DBs
NCBI-GeneID:
108797918
NCBI-ProteinID:
XP_018425122
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MASVNCKVAASLFKRTLCLSPAHKPAGQRSLLTVGRLQERGLREGRAVHKCFTPHNPAPC
CRFHAVSLPRQDVMSPSLQTCYKYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTV
EDDMTISLETKIPMLHNFHTFLYQADWSFTDSKEKDRQVLEDFPTISLEFRNLAVVYQEV
IADICQKMGVGMAEFLEKHVETLLEWDKYCHYVAGLVGIGLSRLFSASELEDPIVGEDTR
LSNSMGLFLQKTNIIRDYLEDQLEGREFWPKEVWSRYGKKLSDLAKPENIVPAVHCLNEL
ITNAMQHAPDVLLYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGVVKIRKGQAV
TLMMDATNIQAVRAIMYQYVEEIYQKIPMTDPSSGRTQNIIAAVRKLSLLNGPLVSRPSY
SPIYLSCAMLLAALSWQYLSTVQASEEVHTGQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgtcaactgcaaggtggccgcttccctgttcaagaggacgctgtgcctgtcc
ccggcccacaagcccgccgggcagcgctcgctgctgacggtcggcaggctgcaggagagg
gggctgcgggagggccgcgccgtccacaagtgcttcaccccccataacccggccccctgc
tgccgctttcacgccgtctctctcccccgacaggacgtcatgagcccgagcctgcagacc
tgctacaagtacctgaaccagaccagccggagcttcgccgccgtcatccaggccctggac
ggggagctacggcacgccgtctgtatcttctatctggttctgagagctctggacacagtg
gaggatgacatgaccatcagcctggagaccaagatccccatgctgcacaacttccacacc
ttcctgtaccaggccgactggagcttcacggacagcaaagagaaggatcgccaggtgctg
gaggacttcccaacaatctctttggagtttaggaacttggcggtggtctaccaggaggtg
atcgccgacatctgtcaaaagatgggggtggggatggcggagttcctggagaagcatgtg
gagacgttactggagtgggacaagtactgtcactacgtggctggtttggtggggatcggc
ttgtcccgtctgttctctgcatcagagctggaggaccccattgtaggagaggacacgagg
ctctccaactccatgggtctgttcctgcagaagaccaacatcatccgtgattacctggag
gatcagctggaaggccgagagttctggccgaaagaggtgtggagcagatacgggaagaag
ctgtctgacctcgccaagccagaaaacattgtgccggccgtgcattgcctgaacgagctc
atcaccaacgccatgcaacatgcgcccgacgtcctgctttacctgtcccgactgcgaaac
caaagcgtgttcaacttctgcgcaatcccgcaggtgatggctatcgccacgctggccgcc
tgttacaacaaccagcaagtgtttaaaggagtggtgaagatccggaagggccaggctgtg
actctgatgatggacgccacaaacatccaggctgtgagagccatcatgtatcagtacgtg
gaggagatttaccagaagatccccatgactgacccatcttctggacggacacaaaacatt
atagccgctgtcaggaagctgagtttgctcaatggccccctggtttcccggcccagctat
tcccccatatacctgtcctgcgccatgctactggcggccctcagttggcagtacctgagc
acggtgcaggcctcagaggaagtccacacgggccagtga
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