KEGG   Nanorana parkeri (Xizang Plateau frog): 108798165
Entry
108798165         CDS       T04897                                 
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
  KO
K24356  collagen type XXV alpha
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:npr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:npr00536]
    108798165 (COL25A1)
Glycosaminoglycan binding proteins [BR:npr00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   108798165 (COL25A1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 108798165
NCBI-ProteinID: XP_018425401
LinkDB
Position
Unknown
AA seq 654 aa
MLVKEGAGSKVDNFQRCDGNKPGDGSTSWSRTLPSVLALVVSLFSLASCLYLNVKSSDLQ
DRMWAIEHGKSGEIFHVPGLSVDQLNSIVQEKVDQLLSQRSYEHMAKIRISREVPADCNC
PAGPPGQRGKRGRRGEPGPPGQPGTQGPPGPKGDKGDQGDQGPRMVFPKINHGFLSADQQ
LIKRRLIKGDQGQAGPPGPPGPPGPPGPRGPPGDTGKDGPRGLSGVPGEPGQPGEPGLVG
PMGPPGQKGSNGDSGTPGLDGQKGDLGAPGLDGIQGIKGDQGESGEKGDMGEAGPKGDTG
GKGDPGSSAAGIKGEPGESGRSGHKGEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPGT
KGERGELGPPGRGERGLPGILGPKGEPGESGSRGPKGSKGESGSRGDAGPIGPRGPPGQK
GDQGATEIIDYNGNIQEALQRITAITVTGPPGPPGLPGLPGPKGDGGPIGPPGVDGEQGP
KGSKGDHGESGITGEKGGIGLPGLPGANGMKGEKGDHGAAGPHGASIIGPPGPPGPHGPP
GPMGPHGLPGPKGTDGPLGPPGPAGPKGDRGEKGAVGDPGPRGPYGLPGKDGEPGLDGFP
GPRGDKGDPGERGEKGFRGLKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgttggtgaaagaaggagctgggagtaaggtggacaacttccagaggtgtgatgggaac
aagcccggagatggatctacaagctggagtaggactttgcccagtgttttggctttggtg
gtgtctcttttctctctagcatcctgtctgtacctgaatgtgaagagcagcgatctgcag
gacaggatgtgggctatagaacatggcaagtctggggagatcttccatgtgcctggatta
tctgtggatcagctcaactccatagtccaagagaaggtggaccagcttctgtcccagagg
tcatatgaacacatggcaaaaatacgaatctcaagagaagtgccggcagattgtaactgc
ccagcaggccctccaggacaaagaggcaaaagaggtagacgaggtgaacctggacctcct
ggtcaacctggaactcaaggtcctcctggtcccaagggtgacaagggagatcaaggtgat
cagggccctcggatggtgtttcctaagatcaatcacggctttctttctgctgatcagcag
ctcattaaacgccgcctcattaagggtgaccaaggacaggcagggccaccaggtccacct
ggtcctcctggaccaccagggcctagaggtccaccaggtgacaccggtaaagatggacca
agaggattatctggagttccaggagagccaggacaaccaggtgaaccaggcttagtcggt
ccaatggggcctcctggacaaaagggttccaacggagactcaggaactccaggacttgac
gggcaaaagggggatctaggtgcacctggattggatggcatacaggggataaagggtgat
caaggagaaagtggtgaaaagggtgacatgggtgaagctggtcctaaaggtgacacagga
ggaaagggagatccagggtcctcagctgctggcatcaagggggagcctggagaatcagga
cgttctgggcataagggtgaaccagggcttcctgggctacctgggcttcctggaataaag
ggcgaaccaggattccttgggcctcagggagaacctggcctaccaggcctgccaggaact
aagggtgaacgtggagagcttggtcctccaggaagaggagaaagaggtcttccaggaatt
ctaggcccaaaaggagaaccaggggaatctggctctagaggcccgaaggggtccaagggt
gaatctgggagcagaggtgatgctggtccaattggtcctagaggacctccaggacaaaag
ggagatcaaggtgccacagaaattatagattacaatggaaatattcaggaagcattgcag
aggattaccgccattacagttacgggacctcctggaccacctgggctacctggtttgcct
ggaccaaagggagatggaggccctattggacctccaggagttgatggggagcagggtcct
aaaggctccaaaggagatcatggcgagtctggtataactggagagaagggaggaattggc
cttcctggattaccaggtgcaaatgggatgaagggagaaaaaggagatcatggtgcagct
gggcctcatggagcttctatcattggccctcctggcccaccagggcctcatggcccccca
ggcccaatgggaccacatggattgccaggtccaaagggcacagatggtccacttggtcct
cctggtccagcaggtccaaaaggtgaccggggtgaaaaaggagctgttggtgatccagga
ccaagaggaccatatggtttacctggtaaagacggggaaccaggtcttgatggttttccg
ggtcctcgaggagataaaggtgacccaggagaaaggggagaaaagggtttccgtggatta
aagggggaaaaaggggaaccaggtcagcctggcctggatgggctggatgccccttgccaa
ttgggaccagatgggcttccaatgcctggctgttggcaaaagtga

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