Nanorana parkeri (Xizang Plateau frog): 108798165
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Entry
108798165 CDS
T04897
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
npr00536
]
108798165 (COL25A1)
Glycosaminoglycan binding proteins [BR:
npr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108798165 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
108798165
NCBI-ProteinID:
XP_018425401
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MLVKEGAGSKVDNFQRCDGNKPGDGSTSWSRTLPSVLALVVSLFSLASCLYLNVKSSDLQ
DRMWAIEHGKSGEIFHVPGLSVDQLNSIVQEKVDQLLSQRSYEHMAKIRISREVPADCNC
PAGPPGQRGKRGRRGEPGPPGQPGTQGPPGPKGDKGDQGDQGPRMVFPKINHGFLSADQQ
LIKRRLIKGDQGQAGPPGPPGPPGPPGPRGPPGDTGKDGPRGLSGVPGEPGQPGEPGLVG
PMGPPGQKGSNGDSGTPGLDGQKGDLGAPGLDGIQGIKGDQGESGEKGDMGEAGPKGDTG
GKGDPGSSAAGIKGEPGESGRSGHKGEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPGT
KGERGELGPPGRGERGLPGILGPKGEPGESGSRGPKGSKGESGSRGDAGPIGPRGPPGQK
GDQGATEIIDYNGNIQEALQRITAITVTGPPGPPGLPGLPGPKGDGGPIGPPGVDGEQGP
KGSKGDHGESGITGEKGGIGLPGLPGANGMKGEKGDHGAAGPHGASIIGPPGPPGPHGPP
GPMGPHGLPGPKGTDGPLGPPGPAGPKGDRGEKGAVGDPGPRGPYGLPGKDGEPGLDGFP
GPRGDKGDPGERGEKGFRGLKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgaaagaaggagctgggagtaaggtggacaacttccagaggtgtgatgggaac
aagcccggagatggatctacaagctggagtaggactttgcccagtgttttggctttggtg
gtgtctcttttctctctagcatcctgtctgtacctgaatgtgaagagcagcgatctgcag
gacaggatgtgggctatagaacatggcaagtctggggagatcttccatgtgcctggatta
tctgtggatcagctcaactccatagtccaagagaaggtggaccagcttctgtcccagagg
tcatatgaacacatggcaaaaatacgaatctcaagagaagtgccggcagattgtaactgc
ccagcaggccctccaggacaaagaggcaaaagaggtagacgaggtgaacctggacctcct
ggtcaacctggaactcaaggtcctcctggtcccaagggtgacaagggagatcaaggtgat
cagggccctcggatggtgtttcctaagatcaatcacggctttctttctgctgatcagcag
ctcattaaacgccgcctcattaagggtgaccaaggacaggcagggccaccaggtccacct
ggtcctcctggaccaccagggcctagaggtccaccaggtgacaccggtaaagatggacca
agaggattatctggagttccaggagagccaggacaaccaggtgaaccaggcttagtcggt
ccaatggggcctcctggacaaaagggttccaacggagactcaggaactccaggacttgac
gggcaaaagggggatctaggtgcacctggattggatggcatacaggggataaagggtgat
caaggagaaagtggtgaaaagggtgacatgggtgaagctggtcctaaaggtgacacagga
ggaaagggagatccagggtcctcagctgctggcatcaagggggagcctggagaatcagga
cgttctgggcataagggtgaaccagggcttcctgggctacctgggcttcctggaataaag
ggcgaaccaggattccttgggcctcagggagaacctggcctaccaggcctgccaggaact
aagggtgaacgtggagagcttggtcctccaggaagaggagaaagaggtcttccaggaatt
ctaggcccaaaaggagaaccaggggaatctggctctagaggcccgaaggggtccaagggt
gaatctgggagcagaggtgatgctggtccaattggtcctagaggacctccaggacaaaag
ggagatcaaggtgccacagaaattatagattacaatggaaatattcaggaagcattgcag
aggattaccgccattacagttacgggacctcctggaccacctgggctacctggtttgcct
ggaccaaagggagatggaggccctattggacctccaggagttgatggggagcagggtcct
aaaggctccaaaggagatcatggcgagtctggtataactggagagaagggaggaattggc
cttcctggattaccaggtgcaaatgggatgaagggagaaaaaggagatcatggtgcagct
gggcctcatggagcttctatcattggccctcctggcccaccagggcctcatggcccccca
ggcccaatgggaccacatggattgccaggtccaaagggcacagatggtccacttggtcct
cctggtccagcaggtccaaaaggtgaccggggtgaaaaaggagctgttggtgatccagga
ccaagaggaccatatggtttacctggtaaagacggggaaccaggtcttgatggttttccg
ggtcctcgaggagataaaggtgacccaggagaaaggggagaaaagggtttccgtggatta
aagggggaaaaaggggaaccaggtcagcctggcctggatgggctggatgccccttgccaa
ttgggaccagatgggcttccaatgcctggctgttggcaaaagtga
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