Nanorana parkeri (Xizang Plateau frog): 108798447
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Entry
108798447 CDS
T04897
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03013
Nucleocytoplasmic transport
npr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108798447 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
108798447 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108798447 (THOC5)
03041 Spliceosome [BR:
npr03041
]
108798447 (THOC5)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
108798447 (THOC5)
Spliceosome [BR:
npr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108798447 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
108798447
NCBI-ProteinID:
XP_018425703
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MSSDTKKRKPKVIRSEEGKRNRHEEQEGRYYSEEAEVDLRDPKKDYQLYKETCEELQRLM
AEIQDLKSKGSKDASAEIEERRIKSCVHFMTLKKLNRLAHIRLKKARDQTHEAKQKVDAY
HLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVTVEEFYSEAPSEISKQDITSGDPHQQ
TLARLDWELEQRKRLAEKYKESLASKEKILKEIEVKKEYLNSLQPQLHNIMQASLPVQEY
LSMPFDCMHKQYEIARHLPAPLYVLFVQASAYSQACAHMKSYSQPYRQDKKLLVTIEGSV
EEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTFGVQLDDKRKEMLKKHPLSVSLVVKC
KDGSSLNLTFFFLMNLNILTVKAKITTTSELSSAISAGDLLNPDSVLSCLYPGDNGKKTP
NPANRYQFDKVGILALSDYISELGHPYLWVQTMGGLHFPTDQPQPTVVADNALSASHMEK
TVHLLRSRLQSRLSLHRQFASLEHGIIPISGDCQNLFPAKVVTRLTKWNVMPYEDYVVLP
YTKDVVEAGLALDTHLYFSLMIERGTAKLQGAVILNPGYCSVPPLFSLCLNWKGERSSRN
DENIRVMESEINVYYKELCGPSPGFQLLTNQLQRLCMLLDVYLETECHDNSVEGPHEFPP
EKICLRLVR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagatactaagaaaagaaagccaaaggttattaggagtgaagaaggaaaacgg
aaccgtcatgaagagcaggagggacgatattatagtgaagaggctgaggtggacttgcgt
gatccaaaaaaggactaccagctatacaaggaaacctgtgaagaactacagagacttatg
gctgaaattcaggatcttaaaagcaagggcagcaaagatgcatctgcagaaattgaagag
aggcggattaagagctgtgtgcattttatgacactgaagaaactgaatcgtttggctcac
atcaggctaaagaaagccagagaccaaacgcatgaggccaagcagaaggtggatgcatat
cacctgcagttgcagaacttgctgtatgaagttatgcaccttcagaaggaaatcaccaaa
tgcctagagtttaaatctaagcatgaagaaattgagttagttactgtggaagaattttac
agtgaagctccatcagagatcagcaagcaagacataacttctggtgatccccatcaacaa
acattagctcgtttggactgggagcttgagcagaggaaaagattggcagagaagtacaag
gagagtttggccagtaaagagaagatactaaaagagatagaagtgaagaaggaatatctg
aacagtcttcagccacagcttcacaacattatgcaggcctcactcccggtccaggaatat
ttgtcaatgccatttgattgtatgcataaacagtatgagatagcacgccaccttccagca
cctctgtatgtactgtttgtccaggccagcgcctacagtcaggcatgtgcccacatgaag
agttactcccagccctataggcaggacaagaagctcctggtcaccatcgaagggagtgtt
gaagaggcaaaagctttgtttaaacctccagaagattcacaagatgatgaaagtgattct
gacgcggaagaggagcagacaacgaagcggagacgtccaacatttggggtacagctggat
gataagagaaaggagatgctgaagaaacatcctttgtctgtgtcccttgtagttaagtgt
aaagatggcagctctctgaatctgaccttcttcttccttatgaacctcaatatactcacc
gtaaaggcaaagattacaacaacatctgagctgtccagtgctattagtgcaggtgatctg
ctaaaccccgactctgtactcagctgcctctaccctggggataatggcaagaaaacccca
aatccagctaatagataccagtttgataaagtaggcatcctggcattgagtgactatatt
tcagagcttggtcacccttacctgtgggtacaaacaatgggtggtctacattttccaaca
gatcaaccacagcctacagttgtagcagacaatgctctaagtgccagtcacatggagaag
accgttcacttgctgaggtcccgtctacagtctcggctatctcttcacaggcagtttgca
tctctcgagcatggtatcattccaatttctggagattgccagaacctttttcctgccaaa
gtggtgacacggttaacaaagtggaacgtgatgccatatgaagattatgtggtgctccct
tacacaaaagatgtggtggaggcaggactagcactagatacccatctatatttttccctc
atgattgagagaggaacagccaaattgcaaggagccgtaattcttaatcctggttattgc
tcagttccaccattgttcagtctttgtctaaactggaagggagagcgcagttccagaaat
gatgaaaacatccgggttatggagagtgagatcaatgtctactataaggagctatgtggc
ccttctcctggctttcagttgctaactaatcagctgcagagactgtgcatgctgctagat
gtctatctagagacagaatgccatgataacagtgtggagggaccacatgaatttcctcca
gagaagatatgtctacgtttagtcaggtaa
DBGET
integrated database retrieval system
