Nanorana parkeri (Xizang Plateau frog): 108798472
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Entry
108798472 CDS
T04897
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npr03400
]
108798472 (PMS1)
DNA repair and recombination proteins [BR:
npr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108798472 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HATPase_c
HMG_box_2
HMG_box_5
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108798472
NCBI-ProteinID:
XP_018425734
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MHHLPSETIRLLSSSQVITAVVSVVKELVENALDANANSIEIKLDNFGFDKIEVQDNGDG
IKAADAPVMGIKHYTSKITNHEDLGALETYGFRGEALGSICSVAEVHITTKTAADEISTQ
YVLDNTGHVKSHKPSHLGLGTTVTVLNLFKNLPVRRQFFSTTKKRKAELKKVQDLLMAYG
IIKPELRVVLVHDKVVIWQKNKVSDHKMALMSVLGTSVMNNMAPFQHQDDDSEIRIHGFL
PKREANNLTSASSSERSFIFINQRPVHYKEILKMVRSYYNQNITSHSYPVFFMNIVVPAS
FVDVNLTPDKTQVMLQNKESVLTAVEFMLKSMYSDPILREVDSVNAQSSEADVNSKVPAK
ENDGKDMIVETTKPLEKNVFIHLNDNIEKLESQAEVVLTDPLVDSSVWPNHDRQWNFTME
HVKGDEADREPESRTAGQPSEYKNTTSNDILETLDDNWSKGTAFKNSKGENVQPVTILCP
SRETNGSKMSEETSLIKSPENTENKSTNVIYEKTGFITAFDLMNNRVIKKPMSAVDIFTQ
EYRTKYLKDAPRVGFDDISSEMLDVWEKLDEEEKLKYEEKAAKDLKRYKLQSANATERNM
QKPKETEKRLRLVSGESAAQKIKQKTALSNQQILDTMFQSQVQKKASTPAVKTTQIAFSL
NDLKQKHCRLPVKDMQDAEFSLISKLNFPGAWVLASKKAITLLNPYRMEEVLLCKRLMGN
HIIPAETLDSPIVIRHRLLGETDYLSILLGMQKDNPKPNGHIYFSDPRLTANGFVIKMIP
GSPDSHVEIEGMASVLPFYGISDLKEILNFVMNKNARDLCDCRPLKVLNYLEAEAVRLTR
QLPLTLAKDDVQNTLSRMKKQLGDQTKGCIHGRPFYYHLADIPQDDD
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacttgccgtcagaaaccatccgattactatccagctcccaagtgattactgct
gtggtcagtgtggttaaagagcttgtggagaatgccttggatgctaatgctaacagcatt
gaaataaaactggacaactttggatttgacaagattgaggtccaggataatggggacgga
attaaagctgcagatgctcctgttatgggcatcaaacactacacctctaaaattaccaac
catgaggacttgggggctttggagacatatgggtttcgtggagaagctttgggttcaatc
tgctctgtagcagaggtgcatattacaacgaagactgctgccgatgagatcagcacccag
tatgttttggataacactggacatgttaaatctcataagccatcacaccttggactgggg
actacagtcacggtcttaaatttattcaagaatttgccagtaagaagacaatttttttct
accacgaagaaacgcaaagcagagctcaaaaaagttcaagaccttctaatggcatatgga
attattaaaccagagcttagggttgtacttgtacacgataaggtggttatatggcagaag
aacaaagtatcagatcacaaaatggcactaatgtcagttttgggaacctcagtcatgaat
aatatggcgccttttcaacaccaagatgatgattcagagatcagaattcatggatttctt
ccaaagcgagaagcaaacaatttaaccagtgcttcaagttcagaaaggagttttattttc
atcaaccaacgaccagttcattacaaagaaatattgaagatggttcgatcatactataat
caaaatataacatctcattcctatcctgtgtttttcatgaatattgttgtcccagcttca
tttgtagatgtcaatctaactccagataaaactcaagtaatgttacagaataaggaatcc
gtgctcactgctgttgagtttatgctgaagtctatgtattctgatccaatactcagggaa
gttgacagtgttaatgcacagtcttcagaggctgatgtgaacagtaaggttcctgcaaaa
gaaaatgatggcaaagatatgattgttgaaactactaagcctctggagaagaatgtgttc
atacatctaaatgataatattgagaaactggaaagccaggcagaagttgttttaacagat
ccattagtagacagtagtgtatggcctaaccatgacaggcagtggaatttcaccatggaa
catgttaaaggtgatgaagctgacagggaacctgaatctagaactgctgggcaaccctca
gagtacaaaaacaccacttcaaatgatatcctggaaacattggatgataattggagtaaa
gggactgcttttaaaaattcaaaaggagaaaacgtacaacctgttactatattatgccct
tcacgtgaaacaaatggcagcaaaatgtctgaagaaactagcttaattaagagtcctgaa
aatacagaaaataaatctacaaatgtaatctacgagaaaactggatttataaccgctttt
gacttgatgaataacagagttataaagaaaccaatgtctgcagtagatattttcacccag
gaatatcgaacaaaatatcttaaagatgcaccaagagttggatttgatgacatttcttca
gaaatgttggatgtttgggaaaaactcgatgaagaggaaaaacttaagtatgaggaaaaa
gcagccaaggacttgaagcgatacaagctgcagtctgcaaacgctacagaaagaaatatg
caaaagccaaaagagacagaaaaaagactgaggctggtgtcaggagaaagcgctgctcaa
aaaataaaacagaaaacggcactctccaatcaacaaatcctggatactatgtttcagtca
caagttcaaaagaaagcatctacacccgctgttaaaactacccaaatagcgtttagcctc
aatgacctaaagcagaagcattgcaggcttccagtgaaagatatgcaggatgcagaattt
agtttaataagtaaattgaattttcccggtgcttgggttttagcatctaagaaagcaata
accttgttaaatccgtacagaatggaagaagtgttgttgtgtaaacgactcatgggcaat
cacatcattcctgcagagactttggactcaccaattgtgataagacataggttgcttgga
gaaacggattacctctcaattcttttaggaatgcaaaaggacaatccaaaaccaaatgga
catatttatttttcagaccctagactaactgctaatgggtttgtaattaaaatgatacca
ggttctccagatagccatgtggagattgaagggatggccagcgttttgcctttttacggg
atatctgatctaaaggaaatcttaaactttgtgatgaataaaaatgcaagagatctgtgt
gactgtagaccccttaaagttttaaattatttggaggctgaagctgtaagactgacaaga
caactacctttaacactagcaaaagacgatgtacagaacactttgagtcgaatgaaaaaa
cagcttggagatcaaactaaaggatgcatccatggtcggcctttttattatcacctagct
gatattcctcaagatgatgattag
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