Nanorana parkeri (Xizang Plateau frog): 108798734
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Entry
108798734 CDS
T04897
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npr03041
]
108798734 (PRPF39)
Spliceosome [BR:
npr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108798734 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
MnmE_helical
TPR_19
ARM_TT21_5th
Mob1_phocein
Myc-LZ
Motif
Other DBs
NCBI-GeneID:
108798734
NCBI-ProteinID:
XP_018426019
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MQDSKPDHNPAMGSSGDNAAASAEASQATKENKDILEVTAMEQSPEQDSVPGVEEAAEPP
PKTEPEPPLPPEFDKYWKAVEANPEEFTTWTYLLHYIEQENHIYAARRVFDMFLAHYPYC
YGYWKKYADLERRNNNILEADEVYRRGIQAITLSVDLWIHYLQFLKETLDPVDPETCNTL
RGTFEHAIMSAGLDFRSDKLWEMYITYETEQGNLSGVTSIYSRLLSIPTHLYAHHFQKFK
DHIQGNLPRDFLTSEKFVELRQELAEMRQQSGVKADYPTGLEEITDPAKRTTEVENMRHR
IIEVHQEIFNLNENEVHKRWTFEEGIKRPYFHVKALEKIQLNNWKEYLELEMENGSHERV
VILFERCVIACALYEEFWIKYAKYMERHSAEGARHVYTRACTIHLQRKPLAHLLWAAFEE
QQGNIDEAKNILKTLEQSTDSLAMVRLRRVNLERRHGNLIEAENLLAEAMKNAKSNSEYS
FYAIKLSRHYSKIQKNIGNAKKVLNDAIQRDKENTKLYLNLIDLEFNGDVKQNEANILSH
FDKVIKSSMPLSTRVVFSQRKVEFLEDFGSDINKLLTTYDEHQKLLKEQDNLKRKSENGL
EQMDAKRLHTEDAAVVSAAPVAATEAVPSAYNYSNWYQYNYQNAGAWNYGQYYHPPST
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattcaaagcccgatcacaatcctgcgatggggagctcaggagacaatgcagca
gcctcagcggaggcctcccaggccactaaggaaaataaagatattctagaggtgacggca
atggagcagtctccggaacaggattctgtacccggcgtggaggaggcagctgaaccccct
ccaaaaacagagccagagccgccgctgcccccagagtttgacaagtactggaaggccgtg
gaggccaaccctgaggagttcacaacttggacttatctgctgcattatattgaacaagag
aatcacatctatgctgcccgaagagtgtttgacatgtttcttgctcattatccatactgt
tacggttactggaaaaagtatgccgatctggagagacgcaataacaacatattggaagcc
gatgaggtctaccggagaggaattcaggccatcacattaagtgttgatctttggatacat
tatctacagttcttaaaagaaacgttagatcctgtggatcccgagacatgtaatacatta
agagggacatttgagcatgcaatcatgtctgcaggcttagattttcgatcagacaagctg
tgggagatgtacatcacctatgagactgagcagggaaatctaagtggtgtcacctccatt
tacagtcgcctgcttagtattcctacacatctctatgctcaccatttccagaagtttaaa
gatcacattcagggaaatctgcctagagatttcttaacgtctgaaaagtttgttgagctg
cgacaagagctggctgagatgagacaacaaagtggagtaaaagcggattacccgactggc
ctggaggagataactgacccagcaaagcgcacgacagaagtcgaaaacatgcgacataga
attattgaggtgcatcaagaaatattcaacctcaatgagaatgaagtccataagaggtgg
acctttgaggaaggcattaaacggccctactttcacgtaaaagcgttggagaaaatccag
ctgaataactggaaagaatatttggagttggagatggagaatgggtcacatgagcgtgta
gtgatcctgtttgagagatgcgtcattgcctgcgccctctatgaggagttttggatcaag
tatgccaagtacatggaacgacacagtgctgagggggcgagacatgtctacactcgggct
tgcaccatccatctacagaggaagcctttggctcacttactgtgggctgcatttgaggaa
caacaaggtaacatcgatgaagccaaaaatattttaaaaacattagaacagtccactgac
agcctggcgatggttcggctgaggcgagtgaaccttgaaaggcgacatggaaacctaatt
gaagcggaaaacctgttggcggaggccatgaaaaacgcaaaatccaacagtgaatactcg
ttttatgcaataaagctttcccgccactattccaaaattcagaagaatatcgggaatgca
aagaaagtattaaatgatgccattcagagagataaagaaaacacaaagttgtacctcaat
ctgattgatttggagttcaatggagacgtgaaacaaaacgaagccaacatcttgtcccat
tttgataaagtcattaagagctcaatgccattatctacccgagttgtattttcacagagg
aaagtggagttcttggaggactttggatcagatatcaacaaattgctgaccacctatgat
gaacatcagaaactattaaaggaacaagataatctgaagaggaagtctgaaaatgggttg
gaacagatggatgctaagaggttgcatacagaagatgccgcagtggtgtctgctgctcca
gtagctgcaacagaagctgtgccatcagcttataactatagcaactggtaccagtacaac
taccagaatgcaggtgcctggaactatggacagtattaccatcctccttccacctga
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