Nanorana parkeri (Xizang Plateau frog): 108799323
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Entry
108799323 CDS
T04897
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108799323 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108799323 (DHX36)
03012 Translation factors [BR:
npr03012
]
108799323 (DHX36)
Enzymes [BR:
npr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108799323 (DHX36)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108799323 (DHX36)
Translation factors [BR:
npr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108799323 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
NPHP3_N
NACHT
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
108799323
NCBI-ProteinID:
XP_018426680
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MNYEQRRGRGRGGRGRGFSSHHEGGSSKDCSGGGREKPPPHLKGREIGMWYARRQGNKSK
DKERMERAVVRMDESRELQITKLLSTVQAQNNDVKPTLSEDSWWDGENERNSTATQLRET
AFPEKDAWDDDDEVACASECFKENTAFDQTLKEELQSKKTNPRYLEMQRFRAKLPSYTMK
EEIIKMINSSRVTVISGETGCGKTTQVTQFILDDYILKGKGSSCHIVCTQPRRISAISVA
ERVAAERAEPCGRGNSTGYQIRLESQLPRKQGSILYCTTGIVLQWLQSDQCLANVSHIVL
DEIHERNLQSDVLMAIVKDLLNRRPDLKIILMSATLNAEKFSRYFDKCPMLHIPGFTFPV
KEYLLEDVIEMLRYSPKDKDSRPQWKKRFMQGRMMRPETAEKEEIYQERFPGFVRKLQER
YSESTIHALQCIDDEKVDLELIAELIRHIVLKGEDGAILVFLPGWDNISTLNDLLMSQIM
FKSDRFIIIPLHSLMPTVNQTQVFKTPPPGVRKIVIATNIAETSITIDDVVHVIDGGKIK
ETNYDTQNNISTMTVEWVSHANAKQRKGRAGRVKPGCCYHLYNSLRDMLLDDYQLPEIVR
TPLEELCLQIKILKLGGIGFFLGKLMDPPSEKAVCLAINHLIELNALNKREELTPLGFHL
ARLPVEPHIGKMILFGALFGCLDPVLTIAACLSFKDPFVIPLGKEKVADARRKELSKNTK
SDHLTVLNAFLGWEESRRSGQRAEREYCWDNFLSSNTLKMLSDMKGQFTEHLLGTGFVSS
RSPKHSKANINSDNEKLIKAVICAGLYPKVAKIRPSFSKKRQMVKVYTKPDGKVCIHPKS
VNVDEAEFHYSWLVYHLKMKTSSIYLYDCTEVSPYSLLFFGGDISIQKDQGQDTIAVDEW
IVFQSPARIAHLVKDLKTELDSLLQDKIESPEPVDWSETKSRDCAVLSAIIDLITTQENG
EAKNFAPRAQQNTRPCATNLQFYQTST
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgaacagcgcaggggtcgtggtcggggcggccgtggtcggggcttctcatcc
caccacgaaggtggctcgtctaaagattgtagcgggggtggcagagaaaagcccccaccg
catctgaaaggccgggagatcggcatgtggtatgcccggagacagggcaataagagcaag
gataaggagaggatggagagagctgttgtgcgcatggatgaatccagggaactacaaatc
acaaagcttcttagcaccgtgcaggcgcaaaacaatgatgtaaagccaactctttctgaa
gactcctggtgggacggtgaaaatgaaagaaacagtactgctactcaactcagagaaact
gcatttccagagaaagatgcctgggatgatgacgatgaagttgcgtgtgctagtgagtgt
tttaaggaaaatacagccttcgatcaaacacttaaagaagagctgcagagcaaaaaaacg
aatcccagataccttgaaatgcagcggttccgtgcaaagttaccatcgtacactatgaaa
gaggagataattaaaatgataaattccagtcgggtgaccgttattagtggtgagactggg
tgtggaaaaactacccaagtgacgcagttcattctggatgactacatcttgaagggcaaa
gggtcctcatgccacattgtctgtactcaaccaaggagaataagtgccatttcggtagca
gaacgtgttgctgcagagcgagctgaaccatgcgggagggggaatagcactggttaccaa
attcgtcttgaaagccagttgcctcggaaacagggttctatcttgtactgtacaactggc
atagttctacagtggcttcagtctgaccaatgcttggccaatgtcagtcacattgtcctt
gatgaaattcatgagagaaacctgcagtctgatgtcctcatggccatagtaaaggatctt
ttgaaccgtcgcccagatttgaagatcatactgatgagtgccactctcaatgcagaaaag
ttttctcgctactttgataagtgtccaatgctgcatattcctggatttactttcccggtc
aaagagtatctcttggaagatgtcattgaaatgctaaggtattcgcctaaagacaaagac
agtaggcctcagtggaagaaacggtttatgcaaggacgaatgatgcgaccagagacggca
gagaaggaggagatttaccaggagcgctttccaggatttgtgcggaaacttcaagaacgc
tactctgaaagtactatccatgccttgcaatgtatagatgacgagaaggttgaccttgaa
ctgattgctgagcttatcaggcacattgtcctaaaaggggaggatggggcaatattggtg
ttcctcccaggctgggacaatatcagcacccttaatgacttgctgatgtcacaaattatg
tttaaatctgatcggtttattattatccctctgcattcattgatgccaactgtgaaccaa
acacaggttttcaaaacaccacctcctggggttcgaaagattgtgattgccaccaacatt
gcagagacaagtatcacaatagatgatgttgtgcacgtgatagatggtggcaaaataaag
gaaaccaattacgacactcagaataacatcagcaccatgacggtagaatgggttagccat
gctaatgccaagcagaggaaaggtcgtgctggcagagtaaagccaggttgttgctatcat
ctatacaacagcctgagggatatgctgctagatgattaccagctgccagaaattgtaagg
acacctctggaggaactttgcctgcagattaagattttaaagcttggaggcattggtttc
ttcctaggaaagctgatggatccaccatcagagaaggcagtgtgcctggctataaaccat
ctaattgagctgaatgctctcaataaacgtgaggaactgactcccctgggctttcacttg
gcacggttaccagttgaaccgcacattggcaagatgattctctttggagcattgtttggt
tgtttggatcctgtcttaacaattgcagcatgtctcagctttaaagacccatttgttatt
cctttgggaaaggaaaaagtagcagatgcgagaaggaaagaattgtccaaaaatacgaag
agtgaccacttgactgttctgaatgctttcttgggatgggaggagtcaaggcgaagtggt
caaagagcagagagggaatactgctgggataactttctgtcttctaatacacttaagatg
ttaagtgacatgaaagggcagtttactgagcacctccttggaacaggctttgtcagcagc
aggagtccaaagcattccaaagccaatatcaattcagataatgaaaagctcatcaaggcc
gtgatctgtgctggactgtatccaaaagtggctaagattcgccccagcttcagtaaaaaa
aggcaaatggtaaaagtttataccaaaccagatggtaaagtctgcattcatccgaagtct
gttaatgtggatgaagctgagtttcactactcctggctggtctaccacctgaagatgaaa
accagtagtatttacctgtatgactgtacagaggtctctccatattcactacttttcttt
ggaggagatatttccatccagaaggaccaagggcaggacaccattgctgtggatgaatgg
attgtcttccagtcgcctgctcggattgcccacctggtcaaggatttgaagacagagctt
gattcccttttgcaagataagatagaaagtcctgaaccggtggattggagtgaaactaaa
tccagagactgcgctgttctctccgctatcattgatctaataactacacaagagaatggg
gaggccaagaattttgcacctcgagcgcagcagaatacccgaccttgtgcaactaatttg
cagttttatcaaacaagcacatga
DBGET
integrated database retrieval system
